Mpla023348.1
Basic Information
- Insect
- Meiosimyza platycephala
- Gene Symbol
- retn
- Assembly
- GCA_963662105.1
- Location
- OY759211.1:19765932-19793272[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.1e-14 1.3e-10 42.3 0.0 15 80 12 75 4 80 0.91 2 3 0.0084 27 6.0 0.1 75 89 181 195 163 195 0.81 3 3 2.7 8.5e+03 -2.0 0.3 75 75 332 332 305 369 0.58
Sequence Information
- Coding Sequence
- ATGAATAACACCGAATTGAAAACACAAGATGCAAGTGTTGGCACACCTATTAATCGTCTGCCTATTATGGCCAAGTCTGTACTGGATCTATATGAGCTTTACAATTTAGTTATAGCACGTGGTGGTCTGGTTGATgtcatcaataaaaaattatggcaaGAAATAATCAAAGGACTGCATCTGCCGTCGAGTATTACAAGTGCAGCCTTCACGCTGAGAACACAcgATGAAGCTCACTTTTGGTTGAATGGATACGTGAATAAACAAAACTGCCGTATTTGGAGTGATGATATTCCTCAAGTGCATGTTGAGACACCATTACATCCTGAAAAACTGACTATTTGGTGTGCTTTATGGGCTGGTGGAATCATTGGTCCGTTCTTCTTTAAAAACGATGCTGGCCAGACCGTTACAGTCAATGGTGACCGCTATAGAGCCATGATTACTGACTTTTTCGTTCTTCAATTGAACAACCATGATTTGCTGGAgctgtggtttcaacaagacgacGCAACATGTCACATAGCTCGTGTCACAAttgatttattgaaggaaacaTACATGAAATATCTCTACCCATATGAGTgtgagaagaaaaatttaagttcaccAGCTGAATTACAAGCAGCCATCGATGGCAACAGACGTGAAGGACGTCGCTCTAGCTATGGACAATTTGAGGCAATGCACAATCAAATGCAATTAcctCAAATGGGACGTCAAGGATTACCTGGTGCCATGCAACAAATGTCGCCACTGGCTTTGGTTACACATGCTGCCGCCGCAAATAGCCCACAAGCACAGGCAGCAGCCGCTGCTGCAGCTGCACATCATAGACTGATGGCACCATCATTCGGGCAGGTGCCAAATTTGGTAACGCACGAAATTGAGCAACGTATGATGGAGTATTTAAAATTGATACAGGGAAAAAAAGAACCAGTAGCTACAGCATtgcaacaacatcagcaacaacaacagcagcaacaacagcagcaacagcaacaacagcaacatcagcgACAACGTTCCCAAAGTCCAGAGATTACAACACGTGAAGCATTAAATGCATTGGAAATGTCACGTGTTGCACTTTGGCAAATGTATCATAATAACACAAGTCCACCGGCTTCAGTGAATACCTCACCACAGGGTGGTGGTATTGTTGGAGCTGCTGGTGCTGGCGCCAACAATAGCGCTGAGCCACAACGACATCCACCACGTTTTCGTTCTAGCAGCGAAGCCCTCAACCTTTCAGAATCGCCACCAAATCTCAACACAGCTGCAATTAAACGTGAGCGTGAACGCGAACCAACGCCTGAACCAGTGGAACGAGATGATTTTCACCATTTACCACCGCCAGCTAAACGTATTGGTGGTGGTAGTAGTGGTGGCACTATGACCAGTGGTGGAACCATTGTACCGCCTGGTTTCCCAGCTAATTTCTACCTACCACCCAATTTTCATCACgcggcggcggcggcggcgCATCATCAGCATCACGAATCCGATAATGAAGAACAcgatgacgacgatgatgacgatgGAGCAGAGCACAATACAACGGTAAATTCATCAAACGATGATGATCAGCAAGAACGAAAACACATAAATGGCCATCACCATCAGCATCACCAGCAGCACCACTATCAGCAGTTGCAGCATCATCTGCATCATAATGAACGCCATCAACTTGATAAGTCTGACGATTCCGCAATTGAAAATTCACCCTCAACATCTGCCTCTGCTGGTAATGGTCATAGCTCACCTGTTTCGACGAAAAAGATACATCTCTCCAAGCAACAGCAAGTATCGTCTGCAGCGCAATGGAAAGACACCACAGCAGTTGGAGAAAGAAATGCAGCGAATTGTGGTGGTGGTGCTGTTGCCATAAGTCCATTGGAACAATTGAGTTTACTGTCTGGGATGCAGTTTCGAGTTGCACGAAATGGTACTGGCGCTAATGGTGAACAGCAGCTAATCGTTAACCTCGAATTGAATGGTATCAAATACTCTGGCGTGCTTATTGCCAATTCAGCGGCAATAGGGTCAACTACAACTTGCAGTCGGAATAAATTGAATACGGATGATGCAGCTGCTGTTTCAGCATCAACAGACACTGAGACACCAACATCGCCAAGAGGGAAATCAACAACAGTTGCTGGAAAATTATTAGATTCATCGatggcaacagcaacaagcAAAATATCAACATCCAGCAGCATGGAAACAACTGATGTAGATACTggaacaacaacatcaacatcaacagcaacaaaatcatCTTCACTGAAGCTAACAAATGGACCAAGCAGCAATACATTAAAAGATTCCTTATTAAGTTCATAA
- Protein Sequence
- MNNTELKTQDASVGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTHDEAHFWLNGYVNKQNCRIWSDDIPQVHVETPLHPEKLTIWCALWAGGIIGPFFFKNDAGQTVTVNGDRYRAMITDFFVLQLNNHDLLELWFQQDDATCHIARVTIDLLKETYMKYLYPYECEKKNLSSPAELQAAIDGNRREGRRSSYGQFEAMHNQMQLPQMGRQGLPGAMQQMSPLALVTHAAAANSPQAQAAAAAAAAHHRLMAPSFGQVPNLVTHEIEQRMMEYLKLIQGKKEPVATALQQHQQQQQQQQQQQQQQQQHQRQRSQSPEITTREALNALEMSRVALWQMYHNNTSPPASVNTSPQGGGIVGAAGAGANNSAEPQRHPPRFRSSSEALNLSESPPNLNTAAIKREREREPTPEPVERDDFHHLPPPAKRIGGGSSGGTMTSGGTIVPPGFPANFYLPPNFHHAAAAAAHHQHHESDNEEHDDDDDDDGAEHNTTVNSSNDDDQQERKHINGHHHQHHQQHHYQQLQHHLHHNERHQLDKSDDSAIENSPSTSASAGNGHSSPVSTKKIHLSKQQQVSSAAQWKDTTAVGERNAANCGGGAVAISPLEQLSLLSGMQFRVARNGTGANGEQQLIVNLELNGIKYSGVLIANSAAIGSTTTCSRNKLNTDDAAAVSASTDTETPTSPRGKSTTVAGKLLDSSMATATSKISTSSSMETTDVDTGTTTSTSTATKSSSLKLTNGPSSNTLKDSLLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -