Basic Information

Insect: Megathymus violae
Gene Symbol: stc
Assembly: GCA_003671415.1
Location: PDGT01000021.1:181560-195586[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2 2.7e+04 -4.3 1.6 15 19 497 501 496 501 0.81

2 12 0.04 5.4e+02 1.3 1.2 2 10 529 537 529 537 0.93

3 12 3.7e-05 0.51 11.0 18.1 4 19 545 560 543 560 0.93

4 12 1e-08 0.00014 22.4 14.3 1 19 596 614 596 614 0.97

5 12 0.001 14 6.4 11.8 1 19 653 671 653 671 0.98

6 12 2.1e-07 0.0029 18.2 11.1 1 19 712 734 712 734 0.89

7 12 0.75 1e+04 -2.8 2.3 5 10 763 768 763 768 0.95

8 12 0.0001 1.4 9.6 8.0 1 13 774 786 774 786 0.98

9 12 0.16 2.2e+03 -0.6 0.6 2 10 787 795 787 797 0.94

10 12 6.4e-06 0.088 13.4 16.4 1 19 801 819 795 819 0.88

11 12 1.8e-08 0.00025 21.6 12.7 1 17 891 909 891 915 0.83

12 12 0.00022 3 8.5 10.7 1 18 921 943 921 944 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2	2.7e+04	-4.3	1.6	15	19	497	501	496	501	0.81
2	12	0.04	5.4e+02	1.3	1.2	2	10	529	537	529	537	0.93
3	12	3.7e-05	0.51	11.0	18.1	4	19	545	560	543	560	0.93
4	12	1e-08	0.00014	22.4	14.3	1	19	596	614	596	614	0.97
5	12	0.001	14	6.4	11.8	1	19	653	671	653	671	0.98
6	12	2.1e-07	0.0029	18.2	11.1	1	19	712	734	712	734	0.89
7	12	0.75	1e+04	-2.8	2.3	5	10	763	768	763	768	0.95
8	12	0.0001	1.4	9.6	8.0	1	13	774	786	774	786	0.98
9	12	0.16	2.2e+03	-0.6	0.6	2	10	787	795	787	797	0.94
10	12	6.4e-06	0.088	13.4	16.4	1	19	801	819	795	819	0.88
11	12	1.8e-08	0.00025	21.6	12.7	1	17	891	909	891	915	0.83
12	12	0.00022	3	8.5	10.7	1	18	921	943	921	944	0.82

Sequence Information

Coding Sequence: ATGGCCCAGTGGAATAACTCATACGCTTACAACAACCAGTATCAAGGCCAAAACACCTGGAATGGGGACATGAGTGGTCAATATCAAGCTTATTTTCCTAATAGACAATTTGATACCAGTAACCAGTATGTCAGCTTCAACGAGTTTCTCGCTCAAATGCAGTCTGTAGGCGTTCCGCAGACAAACTCCGTCACCTACAATAATATCCAGTATCCAAACTATCCTAATAATCAGTATAGTTATGAAAATATCCCTTCACAAACTGCTCAAATTGATCACAGTTATGGAGCAAATGCGCCAAATAACATTGTATCTTTAAACAATGCTGAACCACCACCTCAAGCATATCAATTGGACACTCATCAACAAAAGCAATATGATTCAGCTATAGCAGAAACAAATAAATACAATGAAATGGTTTTTAACTCAAAATTAACCCCAACAGCTACAGAATTTGTCCCTAAAAGTTCTGTTGTTGACACTGGTACCAATTCCAGTAATATATCACAACTAAATAAACCCTCAACTAGTAAAATTTTTAAAGAGTCTTTAAATATAACCAATTCCAGTAGCCAGAGTAAGCCTCCTAGTTCTGAAACAAATTGGAGAGAAAGACCACAAACTTCTCAGCAAAATGATGGGTCCAATGTGGAAGATGTTGATAGACAGGTTAAATATTACAAAGGTCAGAATAGAAATGGATCTGTAAACAATTTTACAAACAACCATAACAATGATTATAGTAATTTTAACCAAGATTCTTATTACTGCAACCAAGAATCTAATAAAAGCAACCATATTTCTGATGAGCATAATCAAGATGGGAATAGCTCTAGATGCGCAAATGATACTAATAGTGATAGTTCTGAGACAAATACTCGTCAACAGGAGCGGAACAAAAGGATTAATGACCCTAACAGTTACCAAAGGTCTAATAATCAATATTATGATACCAACAATCGAGAACAGAATCGTAATACAGATACCTATCACGAGGGCCAATCGAGGCCCAACTCTAAACAAAGTAGTAATAAAAATAAGGAAACAGATGTAGGTCGAATGTTCTATAACAGTTCAATGCCTAAAGGGAGTCAGGATGTGAGGAATGGCAGAGGTGATGGTTCCGGTCGCCGAGGCTGGGCTGGAAGTCAACGTGTGAGAACAAATGAACGTAACACAGTGGAGGATGAGCAATATGCCAATACATATCTACAGTATAGGGAAGACAAGCTGAATAAAGAACCCAAAGCGAGTCCTGTCAGAACCAAAAATAGTAAAAATGGGACCAATAATGGAGCTAACACAGAAATGACACAGCGCGAACGTCTCAGCGATCAGTTAGACAGAGGCACGTTGGAGTGTTTGGTGTGCTGTGAACGTGTTAAGCAGACAGACCCAGTGTGGTGGTGCTCTAACTGCTATCATGTTTTGCATCTCAAGTGCATTAGGAAATGGGCATTGAGTAGTGTGATTGAGGGCAAGTGGCGTTGTCCGGCGTGCCAGAATGCCTCCAACGAGATCCCGACCGAAAACTATTGCATGTGCGGCGCGGTTCGCAACCCGGAATACCAGCGAGGTGCAAGTGGGGCACACACGTGCGGGCGGGCCTGTCAACGACCTCGCACGTGCCCACACCCCTGTACCCTGCTCTGCCATCCGGGTCCGTGCCCACCTTGCCAGGCTACTGTTAACAAACACTGCGGTTGCGGAACGGAGACGCGGTCGATCTTATGTAGCAGCAAGCTGCCTCAGGTGTGTGGAAGGGTTTGCCAGAAGAAACTTGACTGCGGTGCGCACACTTGCCAAAGGGAGTGTCACGAGGGACCTTGTGATGAGTGCAAGGAGACTAATACACAGGTGTGCTTCTGCGCGGTACCCAAGTCGCGTGTGGTGCCGTGCGAACGTGGCGTGAAAGCGCATTGGACGTGCGGCTCGGATTGCGGGCGCGTGCTGAAGTGCGGTGCGCACGTCTGCCGCCGCCAGTGTCACGCGCCGCCGTGCGCCGCGTGCCCGTTGCGACCCGAGAACGTTCCCACCTGCCCCTGCGGCAAGACCAAGATCCAGAAGGGGCAGCGCAAATCGTGCACGGATCCTATACCGCTGTGCGACAACATATGCGCTAAGCCGCTGCGTTGCGGGCCCGACGATGAGAGGCACTTCTGCAAGGAGAAGTGCCATGAAGGTGACTGTCCGGTGTGTCCCGATTCTACCCACCTGCAGTGTCGCTGCGGCCACTCAACACGCGAGGTACCGTGTCGCGACCTGCCCGAGGCGCGGAACAGCGTCACTTGCCAGCGGAAATGCAATAAGAAGCTGAGTTGCGGCCGACACCGCTGCCGCGAGGTGTGCTGCGCGGGCGGCGAGCACATTTGCACCGTGGTGTGCGGCCGCAGCCTGTTCTGTCAGCAGCACCGCTGCGAAGCGTACTGCCACCCCGGACACTGTGCGCCGTGTCCGCGGCTCGGTTTCGAGGAGCTCCGGTGCGAGTGCGGCTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGTGCGACGCGCCGTGCGGCCGCGCGCGTCCGTGCGGCCACCTGCCGCTCCACTCGTGCCACGACACGAGGAAAGAAAAACCATTCCGTGTTCGCAAGAGGAGTTCTCGTGCGGTCTTCCATGCGGCAAGCCTCTGCCGTGCGGCAAACACACGTGCATCAAGATCTGCCACAAGGGGCCCTGCGATACTGGCAAATGTACTCAACCGTGCACGGAGAAGCGTCCGTCGTGCGGGCATGCGTGCGCGGCGCCGTGCCACGCGGGCGCCGAGGGGGCGTGTCCGAGCACGGCACCGTGTCGTCGCTCCGTGCGTGCTACGTGTCCGTGCGGCCGTCGCTCCGCCGAGCGCGCGTGCTGTGATAATGCACGAGACCTCGCCAGAATAATGAGCCAACTGGCTGTTTCCAAGATGCAAGAAGGCGGTTCCGTCGACTTAAGTGATGTACAGCGTCCAGTCAATATGCTTAAAACGTTGGAGTGCGACGACGAGTGCCGACAGGAGGCGCGCAGCCGCCAGTTGGCGCTGGCGCTGCAGATCCGCAACCCGGACGTGTCGGCGAAACTGGCGCCGCGGTACAGCGAGCACGTACGCGCCACGGCCGCACGCGAGCCCGCGTTCGCTCATCACGTGCACGACCGGCTCGCCGAGCTCGTGCAGCGCGCAAAGAACTCGAAACAAAAAACCCGTTCGCATTCGTTCCCGTCGATGAACCGACAGAAGAGGCAGTTCATACACGAGATGTGTGAACACTTTGGCTGCGAGAGCGTTGCGTACGACGCAGAGCCCAACAGGAACGTCGTGGCAACGGCCGACAGGGAAAAGTCTTGGCTGCCTGCGATGAGCGTTATGGAGGTGTTGGCCCGAGAAGCGGGCAAGCGGCGCGTGCCGGGCCCCGTGCTGCGTGCGCCCGCAGCTACGGCCGTCAGCGCCGCAGCTGCATCCACACCGCTCTCCACTGCCAAATCCACTGGCGGTTGGGCCACGCTGACGTCTACGAACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTAAAATTGACTACTTTGACAACCCGCCCGACAACTAA
Protein Sequence: MAQWNNSYAYNNQYQGQNTWNGDMSGQYQAYFPNRQFDTSNQYVSFNEFLAQMQSVGVPQTNSVTYNNIQYPNYPNNQYSYENIPSQTAQIDHSYGANAPNNIVSLNNAEPPPQAYQLDTHQQKQYDSAIAETNKYNEMVFNSKLTPTATEFVPKSSVVDTGTNSSNISQLNKPSTSKIFKESLNITNSSSQSKPPSSETNWRERPQTSQQNDGSNVEDVDRQVKYYKGQNRNGSVNNFTNNHNNDYSNFNQDSYYCNQESNKSNHISDEHNQDGNSSRCANDTNSDSSETNTRQQERNKRINDPNSYQRSNNQYYDTNNREQNRNTDTYHEGQSRPNSKQSSNKNKETDVGRMFYNSSMPKGSQDVRNGRGDGSGRRGWAGSQRVRTNERNTVEDEQYANTYLQYREDKLNKEPKASPVRTKNSKNGTNNGANTEMTQRERLSDQLDRGTLECLVCCERVKQTDPVWWCSNCYHVLHLKCIRKWALSSVIEGKWRCPACQNASNEIPTENYCMCGAVRNPEYQRGASGAHTCGRACQRPRTCPHPCTLLCHPGPCPPCQATVNKHCGCGTETRSILCSSKLPQVCGRVCQKKLDCGAHTCQRECHEGPCDECKETNTQVCFCAVPKSRVVPCERGVKAHWTCGSDCGRVLKCGAHVCRRQCHAPPCAACPLRPENVPTCPCGKTKIQKGQRKSCTDPIPLCDNICAKPLRCGPDDERHFCKEKCHEGDCPVCPDSTHLQCRCGHSTREVPCRDLPEARNSVTCQRKCNKKLSCGRHRCREVCCAGGEHICTVVCGRSLFCQQHRCEAYCHPGHCAPCPRLGFEELRCECGSXXXXXXXXXXXGVRRAVRPRASVRPPAAPLVPRHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKICHKGPCDTGKCTQPCTEKRPSCGHACAAPCHAGAEGACPSTAPCRRSVRATCPCGRRSAERACCDNARDLARIMSQLAVSKMQEGGSVDLSDVQRPVNMLKTLECDDECRQEARSRQLALALQIRNPDVSAKLAPRYSEHVRATAAREPAFAHHVHDRLAELVQRAKNSKQKTRSHSFPSMNRQKRQFIHEMCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVMEVLAREAGKRRVPGPVLRAPAATAVSAAAASTPLSTAKSTGGWATLTSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00970915;
90% Identity: iTF_00970915;
80% Identity: -