Mvio026959.1
Basic Information
- Insect
- Megathymus violae
- Gene Symbol
- Gata5
- Assembly
- GCA_003671415.1
- Location
- PDGT01000021.1:2082315-2088197[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7e-18 2.7e-14 53.0 3.0 1 35 440 473 440 474 0.98
Sequence Information
- Coding Sequence
- ATGATATCACAACGTGATATGAAGCGAGCTAGCGCCTCATTGGATGTCCTGAGCATAACCGCGGACAAGTTGGAGGAAATAATCAAACCGTTGAACGATAACGAATATGAGCACGCGAGCAAAGATAAGTACGCCGAAATCGGCTCGCCAGACTCCACGGAAGAAATGAAAAATTTGGAAAGCCGACAAGCTGCAGTCACACTTTTGCAGATAAAGAATCACGATCCTAGTAAGTACGCGGTCAAAGTGGAAGAAGGACATCACATAATGTTTAACAGCGTCCCGGGTCTGCCGCCGTCGGATCGAGCGAGAGAGGTGATGCATTGTAATGCCGTCATCGATATTATAAGCAAGGCTGTGGCGGTCGCGCAGCGGGAAAACGAGGAATCTCAGAATTTCGCGCCAAATTATACTAGCGTCATTGATAGGACGCACGCACCCAACGCCGACGTCGTCTATTCGCAAGAGTACCCTGAAGATCAGTACGCGGCCTACAACACGGCCCAAAGCGCCACCAGCCCCGTCAGCAATGACGAACGCACGAACAAAGAAATGGACCTGTCGTTGTACGGCTCCATCAAGAACGAATCGGCTGAACCTAGTGAGCAGCCAGACCGCGAGTCTACGAGCACGTACTTACACAGAACGCTGACGAACAACAGATCGTCTACCTTCGTCGATGAATACAAACAACATGTATTCGGCCGGACGGGCAAAGTGAAGCAGTCGAAAGACAACTCGTCCGTATATGAAGAATGCAGTCAGAGTAGTAGTGGGTCGGATCCTGACAGATTACAGATGGATATATCCGAAATGTCACAGGATGACCCCGAAGAGACCCAGTCCGTACCGTCAGCCCAGTCTTCCCCTAAGCCAGCACATGAGAGCGAAAACGACAAGGAGTCACTGTGGCAAGCACTCCATAGGCAAAACGGTCGCGGGGGTGAAGCGACACAATTGCTGCGACGACTCATCAACAGCAAGCACCTCGGTATGACGGTGTCTCCTCTGAGGGCCACCACATCCCCTGTACCCGCCACCGTGTTGCAGTCCAACGGGGCCGTGTCGCCGAATGGTGAATGGTCAAGTTCACGCGGCGCGAGCGGTGGGAGCGTAGCGGCAGCGGGCGCGGGGGGCGCGGGCACGGCGCGGCGCAAACAGAGCTGTCCGGTGCGTGCGCAACCCGCGCTAGATCCACACCCCGCGCAGTGGACCGCTGCGACAGATCAAGAGGCGGAAAGCGGTGTTGGGGGCGTTTCCCGAGGGGGCTCCGCCTCGTGCGGCACGGGCGGTACGAGCGCACGCGTCGAGCTGTCGTGCAGCAACTGCGGCACGCACACTACCACGATCTGGCGTCGCGACGCTCGCGGCGAGATGGTTTGCAACGCGTGCGGACTGTACTACAAACTGCATGGCGTGCCGCGACCCACGGCCATGCGCCGCGACACCATACACACGAGACGCCGCCGGCCGCGTCATGACGCCAAGCATGCAAGGAATAGTATGTATACGTACTGA
- Protein Sequence
- MISQRDMKRASASLDVLSITADKLEEIIKPLNDNEYEHASKDKYAEIGSPDSTEEMKNLESRQAAVTLLQIKNHDPSKYAVKVEEGHHIMFNSVPGLPPSDRAREVMHCNAVIDIISKAVAVAQRENEESQNFAPNYTSVIDRTHAPNADVVYSQEYPEDQYAAYNTAQSATSPVSNDERTNKEMDLSLYGSIKNESAEPSEQPDRESTSTYLHRTLTNNRSSTFVDEYKQHVFGRTGKVKQSKDNSSVYEECSQSSSGSDPDRLQMDISEMSQDDPEETQSVPSAQSSPKPAHESENDKESLWQALHRQNGRGGEATQLLRRLINSKHLGMTVSPLRATTSPVPATVLQSNGAVSPNGEWSSSRGASGGSVAAAGAGGAGTARRKQSCPVRAQPALDPHPAQWTAATDQEAESGVGGVSRGGSASCGTGGTSARVELSCSNCGTHTTTIWRRDARGEMVCNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHDAKHARNSMYTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00796153; iTF_00673986; iTF_01438563; iTF_01439564; iTF_00025711; iTF_00288533; iTF_01360269; iTF_00970904; iTF_01082969;
- 90% Identity
- iTF_01439564; iTF_00970904; iTF_01082969; iTF_01438563; iTF_00796153;
- 80% Identity
- -