Mvio009797.1
Basic Information
- Insect
- Megathymus violae
- Gene Symbol
- GATA6
- Assembly
- GCA_003671415.1
- Location
- PDGT01000084.1:99922-104916[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-17 3.4e-13 49.5 3.3 1 35 432 465 432 466 0.97 2 2 8.8e-18 3.4e-14 52.7 6.8 1 35 493 526 493 527 0.97
Sequence Information
- Coding Sequence
- ATGGAAAACGTGTCGACCATGGTCCGCGCCGAGGAACAAAGGGAAGAGGTGCACGGCGAAGCGCTGCAGCTGGTAAAGAACGAGGAGCGCGCCAACGAACTGGCGGTGGAGGGGTCCGGTGGTGCGGAGGGGCCGGGCGAGCCCGAGTCCGAGCAGCACTCGGTGATCACGTCGCGCCGCACGCTACGCACCATCACCGCAGCGGGTCACATCACCGAGGACGCGCACGACGAGGGCGTTAAGGACGAGCCACCAGAGCAGGTACTGGAGCACGAGCAATATGCCAAGGAAGAGCGGCATTACGATGAAGAACGACTGCGGCATGCGGAGGTAGAAACGGCGCGCTATCTGTCCTTTAAGCAGGAACCGTACCGTGCGCCGCCGCAGGACAAAAGGATGCAACCACAGTATGCGCGGGCCGCCCCGCCTCGCACGCCCTACAGTCGAGGCCTGGCGCTACGTTACGGGACGCCGCACCACGTTATTGTCACGCAGGAGGGCGAGCCGGACGAGCACGGCCCCGAGGCGTTTCTACAAAAAGAGAAAGAGCAGCTGCAGGTGTACACGGGCGAGGGCGACGGACGGTACGGTGCCGTTCTGGCAGACCAGGTGGCGGCGTCCACCGCGCTCGAGATGATCCAGACTACGTCGCTCACCAACCAGCAAGCGATCGGCGTGGCCTACCAGCAGGTGAAGTATGAGTCGCGTGGCGAGGGCGAGCCGCGGCCGACTACGTATGCTAGTTTGCAACCCGTGACGTCAGTGCACGGCGGGTACTATGCGGGCCAAAGCCCGCAGTACGGGGGTGGCTCGTATGGTGCGTACGGCGGGAACAAGGAGCTGCTGACGTTGTACGGCGCGGGTGGTGCAGCGGGAGCGAGCGTGGCGGCCGGAGGAGGAGCGGGCGGCGCAGGCGCGGCGNNNGACGAATCCCCGCCGGGGCAACTCTTGTACCGCAGCGACCCCACGCTGTCGTCGTCGTCGCTGAACGCGCGCGGCGCCCACGTCGTATATGGCCCAGTGGTGCCGCAGTCGCAAGCGGTGTACGAAACGCCGCCCAGTCCGAACTCACAGCAGGTGACGCTGTATACACACGGGAACGCGGTGCAGTACAAGGTGGGCGGCGAACATTACCTGAGTCAGCCGGGCGGCGTGGAGTATGTACCGGTGTCGGGGTACGAGGGCGGACTGCTGGTTGAGAGCTACCCCGCGCAACCCTGGCCGCCGCACAACCTGCTGCCCATCGACGACGGCTTCGACCCCAGCATGGCTGGCATGGGTGAAGTGAAGGAGTGTGTGAATTGCGCGGCCGCCACCACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACACGCATCAACGGCGTCAACCGCCCGCCGCTCAAGGGGCAGAAGACAAAACCGCAGCAGACGCTGCCGACGAACGGCAACCGGAGGGTGGGCGTGACGTGCGCCAACTGCCGCACCTCCAACACGACGCTGTGGCGTCGCAACAACAGCGGCGAGCCCGTCTGCAACGCTTGCGGACTCTACTACAAACTGCATAACGTGAACCGACCGCTGAGTATGAAGAAGGACGGGATCCAGACGCGGAAACGCAAGCCGAAGAGCATGGGAGGGGGCCACGGGGGCGGCATGGCGCGCGCGGGGGGCGCCGGCGGCGCGAGCGGCTTGACGGTGGAGGCACACTCGCACAAGGTGCTGCCTCCGCTGTACGCGGCGGTGGAGGGGACCGCGGGGGGTGCGGGGGGCTCGCCGCTGCTGCTGTTGCCCGCCCGACACCAGGCTGACATGTTACCAGCGGTAGAGCGTGCGGGGGGGACTGCAGCGTCGTCGCCGCTGCACTACCGTCCTCCATAA
- Protein Sequence
- MENVSTMVRAEEQREEVHGEALQLVKNEERANELAVEGSGGAEGPGEPESEQHSVITSRRTLRTITAAGHITEDAHDEGVKDEPPEQVLEHEQYAKEERHYDEERLRHAEVETARYLSFKQEPYRAPPQDKRMQPQYARAAPPRTPYSRGLALRYGTPHHVIVTQEGEPDEHGPEAFLQKEKEQLQVYTGEGDGRYGAVLADQVAASTALEMIQTTSLTNQQAIGVAYQQVKYESRGEGEPRPTTYASLQPVTSVHGGYYAGQSPQYGGGSYGAYGGNKELLTLYGAGGAAGASVAAGGGAGGAGAAXDESPPGQLLYRSDPTLSSSSLNARGAHVVYGPVVPQSQAVYETPPSPNSQQVTLYTHGNAVQYKVGGEHYLSQPGGVEYVPVSGYEGGLLVESYPAQPWPPHNLLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKTKPQQTLPTNGNRRVGVTCANCRTSNTTLWRRNNSGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGGGMARAGGAGGASGLTVEAHSHKVLPPLYAAVEGTAGGAGGSPLLLLPARHQADMLPAVERAGGTAASSPLHYRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01438560;
- 90% Identity
- iTF_00970903;
- 80% Identity
- iTF_00970903;