Basic Information

Insect: Megathymus violae
Gene Symbol: Znf526
Assembly: GCA_003671415.1
Location: PDGT01000173.1:83617-96608[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.7e-05 0.0034 18.4 3.3 1 23 295 317 295 317 0.99

2 10 2.9 2.7e+02 2.9 0.1 1 23 324 346 324 346 0.91

3 10 0.17 15 6.9 0.2 1 23 350 373 350 373 0.97

4 10 0.15 13 7.0 1.0 1 13 380 392 380 394 0.91

5 10 0.0002 0.018 16.1 3.5 1 23 520 542 520 542 0.98

6 10 0.00052 0.048 14.7 1.9 1 22 548 569 548 573 0.93

7 10 0.00017 0.016 16.3 0.9 1 23 581 604 581 604 0.93

8 10 0.0007 0.064 14.3 0.0 1 23 610 633 610 633 0.98

9 10 5.4e-06 0.00049 21.0 0.7 1 23 642 664 642 664 0.98

10 10 5.5e-05 0.005 17.8 0.3 1 23 670 693 670 693 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.7e-05	0.0034	18.4	3.3	1	23	295	317	295	317	0.99
2	10	2.9	2.7e+02	2.9	0.1	1	23	324	346	324	346	0.91
3	10	0.17	15	6.9	0.2	1	23	350	373	350	373	0.97
4	10	0.15	13	7.0	1.0	1	13	380	392	380	394	0.91
5	10	0.0002	0.018	16.1	3.5	1	23	520	542	520	542	0.98
6	10	0.00052	0.048	14.7	1.9	1	22	548	569	548	573	0.93
7	10	0.00017	0.016	16.3	0.9	1	23	581	604	581	604	0.93
8	10	0.0007	0.064	14.3	0.0	1	23	610	633	610	633	0.98
9	10	5.4e-06	0.00049	21.0	0.7	1	23	642	664	642	664	0.98
10	10	5.5e-05	0.005	17.8	0.3	1	23	670	693	670	693	0.95

Sequence Information

Coding Sequence: ATGGATACGAGTAATTTAAATGAGGAAATAAATCTTAAATTTGATTTACCTGAAATGGACGCCTCGAAGTCGATATGCCGATGCTGTTTGATCAGTAAAAGTAATATGAGCAGAATTACTTTCTTCAGTCAGTTTATGTACGATTTAGCCAATATTACTATATCAGAGTCGGACGGCCTGCCGCAGTGGCTGTGTGGGGAATGTGCGATGCTGCTGCACAAGTCTGTGCGCTTCAAACAGAAGATTCTGCGAGCCCACGCCATGCTCAACGACTATTTAAACAGATGTGCCCCGTTCCCCATAGACCCCCAGGACGCGGAACTGAAGAAATATGAATCACCACATCTGTGCATCACGGACACCCTGGTCGTTGACTCGGTGAAATCCAAGCTGGGCTACCATAAACCTTTAGAGCACGGGAAGCGGCCGGCGCCGGCCGAGCTGCTGGCGTTCCGGCTGCCCCCGGAGGTCGGCGCGGACGGGGCGCTCGGCTCGGTCAAGGACGAGGCCGCCTTCTCCGACCTGGAGGACGACCTGCCCCTTGAGGAGTACAGATCGAATTTGAACGAGGACGACACGGAAGCAGCTCTGTCCAACGAGACGCTAGCGACGATAAAGACCGAGGAGAGGAAGATTAAGAGGAAAAAGAAGTTAAAAGAAGGAAGGAAGGGCAGGGTCGTGAAGGTCGAGAATCAGGAGGGCGACGCGCCGCCGGAGGGCGCTCCGCCGCCGTCTCCACCGCCGCCCGCGCCCCGGTCCAGAGCGTGCTCCGTGCGCAGGGCGCCCGAGATCGACACCACCAAGATAAAGATAGTCGTACTGAACCCCGAGGAGCAGGTCAAGCAGAGGCAGGAGGAGAGCCGCGCCGCGCTCAAGTTCCCGTTCCAGTGCAACCTGTGCTTCAAGGGGTTCAACTTCGAGTCCAAGCTGCAGAATCACATGAAGAAGCACAGCCCGTCCCGCGGGCCGTTCAAGTGCGAGCTGTGCACGATGTACCTGCCGAGCGCGTACAGCGCGTCCGTGCACGCGCTCATCCACACGCGCCGCTACGAGTGCGCGCGCTGCGGCCGCCGCATGGTCGACCGCGGGTCCATCTTGGAGCACTACCGGTCCCAGCACGAGGGCCTGCTCACGCTGTTCACGTGCCACCTCTGCGGCAAGGTCTCCAAACACAAGGTGTTCACATTTCGCCCACCGCGGTTCACGACAGCGTTTGGTGTTGAGACATACGTGTTTCCTACTGCGATGTGGATACTATTGTCATATAAAGTATCTGGTGATAGCCAACGAGTCTGCAGCGGGTGGAGTGCCCACAACCCGCGATATTCACCAAAGGAGGGGGTGCCTCCGGAAGGTCCAACCCGTCAGCGGCACGTCGCCGCGTCTGCCACGTCTGCCGCGACGGACAGCGCTGGGAGCGTTCGAGCACGCTGCCGCAGTGCGGGCCGTGTGGCGGACGGTCGGGGAAAGGGTCCCGTATCACTGCACGCACGGAACTTTAAACACAAGGGTTCAGTGAACGCTCGCGTCCCCAGGATCCACCAGGGCATCAAGAACTACACGTGCGAGGTGTGCGGCGGTAAGTTCCGCACCAGGAACCAGATGAAGCACCACCAGCTGAAGCACTCCGACGTCAAGGAGTACTACTGCGTCGAGTGCGACGTCAGGTTCAAATCGGCGCACACCCTCCGGCAACACCTGCAGAAGAGCTTGAAGCACAAGGACACGCAGAGTCTTAAGTTCCCGTGCGAGCGGTGCGACAAGCGGTTCGAGACGCAGCCGGCGCTGCGCCACCACGAGACGGTGCAGCACGACGGGGTGCGCGCGTACAGGTGTCCGGAGTGCCCGGCGGCGCTGGCCACCGCCAACTCGCTGGCGAAGCACGCGCGCGTCGTGCACGCGGGCCGCCGCCCGCCGGCGAGGCACGTGTGCGACACGTGCGGGAAGGTGTTTAGGGGCAAGAGCGTGCTGGTGAACCACGTGCGCACGCACACGGGCGAGAAGCCGTTCGCGTGCGCGGAGTGCGGTCGCACCTTCACGCAGCGCACGGCGATGCGCACGCACGTGAAGCTCGTGCACCTCAAGCTGCAGCCGCGGGGCAAGATCAAGGCGGAGGCGCCGCCCGCGCCGGCAGCGAAGCCCGAGTTCGGCAAGGAGGCCCCGCTGTTCGAGTGGCGCCAGCCGAGCTGCGAGTACTTCATAGTGACCGCCGGGCCCTAG
Protein Sequence: MDTSNLNEEINLKFDLPEMDASKSICRCCLISKSNMSRITFFSQFMYDLANITISESDGLPQWLCGECAMLLHKSVRFKQKILRAHAMLNDYLNRCAPFPIDPQDAELKKYESPHLCITDTLVVDSVKSKLGYHKPLEHGKRPAPAELLAFRLPPEVGADGALGSVKDEAAFSDLEDDLPLEEYRSNLNEDDTEAALSNETLATIKTEERKIKRKKKLKEGRKGRVVKVENQEGDAPPEGAPPPSPPPPAPRSRACSVRRAPEIDTTKIKIVVLNPEEQVKQRQEESRAALKFPFQCNLCFKGFNFESKLQNHMKKHSPSRGPFKCELCTMYLPSAYSASVHALIHTRRYECARCGRRMVDRGSILEHYRSQHEGLLTLFTCHLCGKVSKHKVFTFRPPRFTTAFGVETYVFPTAMWILLSYKVSGDSQRVCSGWSAHNPRYSPKEGVPPEGPTRQRHVAASATSAATDSAGSVRARCRSAGRVADGRGKGPVSLHARNFKHKGSVNARVPRIHQGIKNYTCEVCGGKFRTRNQMKHHQLKHSDVKEYYCVECDVRFKSAHTLRQHLQKSLKHKDTQSLKFPCERCDKRFETQPALRHHETVQHDGVRAYRCPECPAALATANSLAKHARVVHAGRRPPARHVCDTCGKVFRGKSVLVNHVRTHTGEKPFACAECGRTFTQRTAMRTHVKLVHLKLQPRGKIKAEAPPAPAAKPEFGKEAPLFEWRQPSCEYFIVTAGP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00970646;
90% Identity: -
80% Identity: -