Basic Information

Insect: Megathymus violae
Gene Symbol: -
Assembly: GCA_003671415.1
Location: PDGT01000174.1:85822-91713[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.015 1.4 10.1 0.9 3 23 34 54 33 54 0.98

2 18 0.0002 0.018 16.0 2.5 1 23 91 114 91 114 0.97

3 18 0.0003 0.028 15.5 0.6 1 23 116 138 116 138 0.98

4 18 0.031 2.8 9.2 0.3 1 23 173 195 173 195 0.98

5 18 0.047 4.3 8.6 3.1 1 19 252 270 252 274 0.90

6 18 3.8e-05 0.0035 18.3 0.1 1 20 280 299 280 300 0.96

7 18 0.024 2.2 9.5 0.4 1 23 314 337 314 337 0.96

8 18 0.00012 0.011 16.8 1.5 2 23 344 367 343 367 0.95

9 18 3.7 3.4e+02 2.6 3.9 3 23 375 395 374 395 0.96

10 18 0.15 14 7.0 0.7 1 23 400 422 400 422 0.96

11 18 0.00027 0.024 15.6 1.8 3 23 430 450 428 450 0.95

12 18 0.00017 0.016 16.2 4.8 1 23 456 478 456 478 0.98

13 18 1.7e-05 0.0015 19.4 1.3 1 23 484 507 484 508 0.97

14 18 0.046 4.2 8.6 5.4 1 23 705 728 705 729 0.92

15 18 4.3e-05 0.0039 18.2 1.4 1 23 800 823 800 823 0.97

16 18 0.0003 0.027 15.5 3.6 1 23 882 905 882 906 0.97

17 18 7.7e-06 0.0007 20.5 3.0 1 23 973 996 973 996 0.98

18 18 0.017 1.5 10.0 3.8 1 23 1058 1081 1058 1081 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.015	1.4	10.1	0.9	3	23	34	54	33	54	0.98
2	18	0.0002	0.018	16.0	2.5	1	23	91	114	91	114	0.97
3	18	0.0003	0.028	15.5	0.6	1	23	116	138	116	138	0.98
4	18	0.031	2.8	9.2	0.3	1	23	173	195	173	195	0.98
5	18	0.047	4.3	8.6	3.1	1	19	252	270	252	274	0.90
6	18	3.8e-05	0.0035	18.3	0.1	1	20	280	299	280	300	0.96
7	18	0.024	2.2	9.5	0.4	1	23	314	337	314	337	0.96
8	18	0.00012	0.011	16.8	1.5	2	23	344	367	343	367	0.95
9	18	3.7	3.4e+02	2.6	3.9	3	23	375	395	374	395	0.96
10	18	0.15	14	7.0	0.7	1	23	400	422	400	422	0.96
11	18	0.00027	0.024	15.6	1.8	3	23	430	450	428	450	0.95
12	18	0.00017	0.016	16.2	4.8	1	23	456	478	456	478	0.98
13	18	1.7e-05	0.0015	19.4	1.3	1	23	484	507	484	508	0.97
14	18	0.046	4.2	8.6	5.4	1	23	705	728	705	729	0.92
15	18	4.3e-05	0.0039	18.2	1.4	1	23	800	823	800	823	0.97
16	18	0.0003	0.027	15.5	3.6	1	23	882	905	882	906	0.97
17	18	7.7e-06	0.0007	20.5	3.0	1	23	973	996	973	996	0.98
18	18	0.017	1.5	10.0	3.8	1	23	1058	1081	1058	1081	0.97

Sequence Information

Coding Sequence: ATGGCTTCACTCACCAGTTTACACCGTAACATACATCAGAGATCAATAGATTGCAGCGGCCCGAAACAAACTACAATCGATTTGGTTGGCGGCATCCTCTGCAAAATATGCCGGCTGACTTTTGCAACGAAACAAAGCTACGACAGCCACTATCGTGCCCACGGCGCTTCCACGGACATCGTTTACACATGCAACATTTGTTACAAGGAGATCGTTGGCTATCCAAGTTTCCGTGGTCATTGTTATACAAGTCATGTAATCAAAGAGCGATTCCAATGTGAACATTGCTTGAAACAATTCTCAAAAATCAGCAACCTGAAGGACCATGTCAACAGAATACATAAATTCAAATGCCCTACGTGCAGAAAAGAGTTCCCCAGTAAGAAAGAAATGCTGCTACACCAGATCATTCACAATAGCCTTGACTATCCTCCCTATAATTGTAATACTTGTAAAATCGAAATCGACACAGCCGACGAGTGCAAAGAACATGTAGAAAAGCACTTGAAATTTTTGTATTCCTGTCCAATTTGCAACGATCACATATCGGACAAAGAGAATGCCGCTGATCACATGAAGAAACATTTCGGCGACGTACTTAGTGAAGACAAAAATAAGGAAACTCTTCAGTCATCAGAAGATACATCTGAAGAATTCGGTGGTATAATGTGCCAGTTTTGTTCCTTAATTCTTGAGGACAGAGTCAAATTTGATGCCCATTTCTCGTGTAAACATGGCGACGAAGACATAGTGTACATGTGCGTGGAGTGTGGAAAGAGCTTTGAAAAATATTCTGTATTCAAAAATCACTGCAATGATCACACTTTAAGAAATAAATACAAATGCGAAATTTGCAAGAAGTCTTTTCCGCGCCTGTCTATGCTCGCGGCGCACACGGCAGCTTGCCAGGCGGCGGGCTCGTTGCGGGGAAAGAAGGTGTTTGCCTGTCCATCGTGCAGCCGCCGCTTCGCCAGCATGGGGCGCTGGCGTGAGCACTTGCGAATGAGGCACGACATCCATAACCACCTGCCGTGCCCGCACGACCACTGCGATCGCACTTTTGACACTCCGAAACAGCTGATTCTCCATCAACAATCGCACGAAATTACGAATCAGAACTTTTGCTGTCAATGCAGGCTTGTTTTCTCGGACGTATCCTCTTGCGAGCGACATATAGATATGCACAAAAAAAGGGTGTTCTTTTGTCCTATATGCAAGCGGAATGCAAAAGATAAAAAAGTCATAATGAATCACATATCGAAACATTTCGAAGTCGTTTCCCATCTCTGCCGAATTTGTGGTAAAATCTATAATTCTAAAAAAAGTTTAATCGATCACTTGAAATCGCATAAGAAGGTAAAAAGTTACTCTTGCACTCACTGCAATAAAAGTTTTTTAAAACCGTCCCATTTGGAACAGCATGTAAACACGCATACTGGCGTTAAGCCTTACAAATGTCCCATCTGTGTAAAGTCATTTTCAAACTATCCAAATTGGGTTAAGCATGTACGCAGAATGCATCACGAAGAGAGTATTTACATCAGAAATCCGATTATTGATTCTACAGATGCAGATAGTATTGATAAGGAGGATTCCATAATGGAAAAGGTAGTTAATGAAAAAGATTCTACAAAACCTATTACTCTTTTCAACAAAAACATTTATGCTGATTACAAAAAAGTTAACAATAATTATCAAGTGTCGAATATAAACGAACAAATTTCTAATGTGAATGTCGAGTTAAATATCACTGAGGTACATCAGATAAAGAGAATTGATATTAAAAGTGTAATAAATGATGAAACAGTGACTGTAAATAACAAAGAATCTGTAATGGATATAGCAGATGATGAAAAGTATGACATATGTAACGATACTACGAGAAAAGCTGATAGAAAAAATATTGATACTGTTGAAGTAAACCATATAAAGAGTATAAACATTTTAAATCAGATAATTGATCACACGGTGGGTATTGGAAATGAAGCTTCTCTAATATTAACAGCAACAGGTAAAGATAACGAGATAACTAAAGATATTCAAAAGGAAGATGTGCAACAAAGTTCAATTGCAGATGAACAAATTTCTAACACACATGTTTGCGACAAACCTCATAAGTGTCCTATATGTGAAAAGTCATTTGCAAAATACTGTTATATGAGCAAACATGTAGGTAGAGTACACCACATTAGGAGTATTGACATAAAAAATCTCATAATAGATCACAAAGATGATGTTTGTGACGAGGGCTCTGTCATGGAAACAACGATGAATGAAGAAAATGAGACATCTACCGATAATTCAAAAGGTGAAAATGGTGAACAATTTCCTAATTCTGACGTACTCAAAATACAGATGAACTCAAATAACGAATATCATCTCGATGGTTTCAAGCCACATAAATGCCCCATTTGCGACAAGTCGTTTGCAAAGTACCCTTATGTGACAAAACATGTTCGTAAAGTACATAATAAAAAAAGAATTGATATAAAGAATCCTTTAACTGATCATAAAAAGTTTATTGTTGATGAGATATTAGCAATGGAAACGGGAGTTGATGAAGAAAATGAGACACCTATGGATATTTCAAAAGATAACAATGATCACTTTTTAAATTCAGATAATCAAAATGTAGATAAACCTCATAAATGCCCTATATGTGAAAAATCATTTGCAAAATATCCATACATGACCAAACATGTTCGTAAAGTGCACCACAAAAAGATTATTGATATTAAAAATGCTATTATTGATCACAAGGAAGCTGTTAATGAAGAGATATCCGCAATGGAAATATCTATCGATGGGGAATGTGACATATCTATAGATAACATAAAAGATGATAATGGTGTCCAGTTTCTGTATACAGATAAACCGTCAAATGTAAATCATTCCGCGAACATAGAATTCAAATCTTATAAATGTCCTACATGTGACAAATCATTCGCAAAACATTCATATATGAGTAAACATGTCCGTACTGTACACAACAAAAAGGGTATTGACATTAAAACCTCAACAGACGACCATAAAAACAGCGTTGAAGATGAAGGGTCTGTAATGGAAACAGTGGTCGATGAAGAAAATGATATATCGACGGATCATTCAAAAGACGACAATGATGATCAAATATCGAATGCAGATCATCATACGGATGATAATTACAAACCCTACAAATGTCCAATGTGCGAAAAGACATTTGCAAAAGACCGCTATTGTAGAAAGCATGTTCGCAGAGTACACTATAAAAATGGTATCAAGAGTCCCACATTTGATCCTACTAAGGGCTCTGTAATAGAAACATTAACCGAGAAAGAAAACCAAATAGTAGAATCACAAGATTACTTGAAAAATGAAATATCCAGCATGCATTCAATTGCTAGCATTGTTAATGAAGTAAATACCACGGATTGTCTCAATGATATTGATGATGCTAATGCTAGTATGGACTTCGCGAACGTCAAGTTAGAAAACTATATTTTTAGCGTACAAAGAGATAGCCCGATAGACATTGTTGCTTCGATGCCGGATGGAAAATATTTGCTCAACAATAATAATGACGGCAGTATTACGATTAACAAAGATTTTTTCAAAGATAACAGTGACGATAACGCTTCGATTGCTAAAGATATAATGTACGAGAACAAGGGAAATGCACCAATTGGAACGGAACTGGTTAATGAAAATGGCGAAGCTATCGGTCTCGTTGAGAAAGATTTGTTTACTGCGAACAATAAAGAAACTGCATCGATTGGTAAACACTTGTTTACCGGTAACAGCGAACGAAATGATAATCCCATTGATATCCTTGAATACATCGCGGAAATGCCTGAGAATAACTCGTTGTTTGTCCCTGTGATCAGTCAGGAGGCCCTGTCCGGGAGCGTGCAGCCGCCGGCCGAGGCGGTCTCGTACCCGTGCGAGTACGGTCCCGAGTTCAGCGTCGGCTTCGATCCCGCCTCCACCTCCGGGTTCATCGACCTCGACGACCACATGCTGCCACACATCGACCCGCTGCTCACCATCAACAACCAAACGTGCGTACAGATGCAAACCAACTACCAAAACTACGACTACAACGTCATCGACGCGGCCGACCTCCTCGCGCTGGGCAACGAGGCGTGCAGCAAGATGTGCGCGCAAAACGACCAGACGTACAACGAGTATGTGACGGTGGCGGCCGCCGGCTACGAGCCCGGCTGGGACCCGCCGGTTATCACCAAACTGTGCGACCAATACTCCTACGGCTACGGCGAGATGCCCGAGGCCAGTAGGGTGCCCATAATGAACACGGATATATTTTGA
Protein Sequence: MASLTSLHRNIHQRSIDCSGPKQTTIDLVGGILCKICRLTFATKQSYDSHYRAHGASTDIVYTCNICYKEIVGYPSFRGHCYTSHVIKERFQCEHCLKQFSKISNLKDHVNRIHKFKCPTCRKEFPSKKEMLLHQIIHNSLDYPPYNCNTCKIEIDTADECKEHVEKHLKFLYSCPICNDHISDKENAADHMKKHFGDVLSEDKNKETLQSSEDTSEEFGGIMCQFCSLILEDRVKFDAHFSCKHGDEDIVYMCVECGKSFEKYSVFKNHCNDHTLRNKYKCEICKKSFPRLSMLAAHTAACQAAGSLRGKKVFACPSCSRRFASMGRWREHLRMRHDIHNHLPCPHDHCDRTFDTPKQLILHQQSHEITNQNFCCQCRLVFSDVSSCERHIDMHKKRVFFCPICKRNAKDKKVIMNHISKHFEVVSHLCRICGKIYNSKKSLIDHLKSHKKVKSYSCTHCNKSFLKPSHLEQHVNTHTGVKPYKCPICVKSFSNYPNWVKHVRRMHHEESIYIRNPIIDSTDADSIDKEDSIMEKVVNEKDSTKPITLFNKNIYADYKKVNNNYQVSNINEQISNVNVELNITEVHQIKRIDIKSVINDETVTVNNKESVMDIADDEKYDICNDTTRKADRKNIDTVEVNHIKSINILNQIIDHTVGIGNEASLILTATGKDNEITKDIQKEDVQQSSIADEQISNTHVCDKPHKCPICEKSFAKYCYMSKHVGRVHHIRSIDIKNLIIDHKDDVCDEGSVMETTMNEENETSTDNSKGENGEQFPNSDVLKIQMNSNNEYHLDGFKPHKCPICDKSFAKYPYVTKHVRKVHNKKRIDIKNPLTDHKKFIVDEILAMETGVDEENETPMDISKDNNDHFLNSDNQNVDKPHKCPICEKSFAKYPYMTKHVRKVHHKKIIDIKNAIIDHKEAVNEEISAMEISIDGECDISIDNIKDDNGVQFLYTDKPSNVNHSANIEFKSYKCPTCDKSFAKHSYMSKHVRTVHNKKGIDIKTSTDDHKNSVEDEGSVMETVVDEENDISTDHSKDDNDDQISNADHHTDDNYKPYKCPMCEKTFAKDRYCRKHVRRVHYKNGIKSPTFDPTKGSVIETLTEKENQIVESQDYLKNEISSMHSIASIVNEVNTTDCLNDIDDANASMDFANVKLENYIFSVQRDSPIDIVASMPDGKYLLNNNNDGSITINKDFFKDNSDDNASIAKDIMYENKGNAPIGTELVNENGEAIGLVEKDLFTANNKETASIGKHLFTGNSERNDNPIDILEYIAEMPENNSLFVPVISQEALSGSVQPPAEAVSYPCEYGPEFSVGFDPASTSGFIDLDDHMLPHIDPLLTINNQTCVQMQTNYQNYDYNVIDAADLLALGNEACSKMCAQNDQTYNEYVTVAAAGYEPGWDPPVITKLCDQYSYGYGEMPEASRVPIMNTDIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00970606;
90% Identity: iTF_00970606;
80% Identity: iTF_00970606;