Mvio022644.1
Basic Information
- Insect
- Megathymus violae
- Gene Symbol
- ZNF131
- Assembly
- GCA_003671415.1
- Location
- PDGT01000008.1:478264-489447[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.00032 0.029 15.4 5.0 2 21 166 185 165 186 0.94 2 27 1.9 1.7e+02 3.5 1.7 1 23 219 242 219 242 0.91 3 27 0.0023 0.21 12.7 5.3 2 23 248 269 247 269 0.95 4 27 0.19 18 6.6 3.0 2 21 273 292 272 293 0.92 5 27 0.008 0.73 11.0 0.4 2 23 337 359 336 359 0.93 6 27 0.0015 0.14 13.3 0.8 1 23 392 414 392 414 0.98 7 27 0.00076 0.07 14.2 1.5 1 23 420 443 420 443 0.97 8 27 0.04 3.6 8.8 0.2 1 23 452 475 452 475 0.89 9 27 0.049 4.4 8.5 2.6 1 23 487 509 487 509 0.98 10 27 0.0087 0.79 10.9 2.1 3 21 620 638 618 639 0.92 11 27 0.0092 0.84 10.8 2.0 1 23 670 693 670 693 0.96 12 27 0.025 2.3 9.5 0.4 1 23 698 720 698 720 0.96 13 27 1.4 1.3e+02 3.9 5.1 1 21 723 743 723 744 0.93 14 27 0.00041 0.037 15.1 1.4 1 23 760 783 760 783 0.95 15 27 0.0041 0.37 11.9 0.2 1 23 789 811 789 811 0.95 16 27 0.075 6.8 7.9 0.4 1 23 845 868 845 868 0.94 17 27 0.056 5.1 8.3 1.1 1 21 876 896 876 897 0.94 18 27 0.0019 0.18 12.9 1.0 2 21 1004 1023 1003 1024 0.93 19 27 8.9 8.1e+02 1.4 0.2 3 23 1031 1052 1030 1052 0.94 20 27 0.00024 0.022 15.8 0.1 2 23 1058 1080 1057 1080 0.95 21 27 9.4e-05 0.0086 17.1 0.5 2 23 1086 1107 1085 1107 0.96 22 27 0.39 36 5.7 1.6 2 21 1111 1130 1111 1131 0.92 23 27 1.3e-05 0.0012 19.8 0.7 1 23 1157 1180 1157 1180 0.95 24 27 0.00045 0.041 14.9 0.5 1 23 1186 1208 1186 1208 0.95 25 27 0.1 9.2 7.5 0.1 1 23 1214 1236 1214 1236 0.97 26 27 0.0053 0.48 11.6 0.3 1 23 1242 1265 1242 1265 0.94 27 27 0.021 1.9 9.7 2.1 2 23 1272 1294 1271 1294 0.95
Sequence Information
- Coding Sequence
- ATGACGAGGGAAGTTAATATCAAGGCTCTTGTGTCGCATGTAGTAAACGGTGACGGAATTCACAAATGCAGAATTTGTATGGGAGATACTTCTGAAGGACAAGTCTATTTAGGTGATACCGTGATGATGGATGGTGATAAACCTGTAACTCTATCAGAATTACTGGAAGTAATAACTGGAGTTGAGGTGCAGCTGGAAGACGACATGCCAGCTGGCCTGTGCACCGTCTGTTCCACGTCAGCCCTCAACGCGGCTCACTTTCGAATGTTTTGCAGACAAGCCTCGGAACAATGGCAGACGGCTCTGTTGCTTCTAGCAAACATAAGCTCTGTATCTATTAAGGCGAACAAAGCCATACTTATTATACTCGGTCAGAATAAAATGACAATAGTTGATAGATTTCAAAGAGAGGAGAAAAGGTCAGATATAGAAAAAATAGAGTCAAAAGTAAAGTCTAAGTTATTTAAAAGGGAAAAAAGGATAGTTGCAGGATGCCAATGCTCTGATTGTGGAAAGAAATTTAAATATCCACAACATTTGCATCAACATTTAAAAGAGTCCACAGATTTTAAACGTGCATGCCATATATGCGCCAAAATTATGGCTAGAGATGACTTAATATCGCACATGAACAATGATCATGGTAGAAAGCCTTATGACTGCAAAAAATGCCCTGCTTTGTTACATTCCTATAGTCAGTTTAAACGACATGAAGTCAAAGCACATTCTAAAGGATCTTGTTTTTGTGGAGACTGCGGGAGAAGCTTCAAATCTCTACACGCATTTCACGCACACCAGTCGGTTCACAGGCTCAAGACATGTCCAAGATGCGACAAACTTTTCCGCAACCAAACTTGTTACTTATATCACGTTAAAAAGTGTTGTAACTTGGATAGTAATAGACAAGATACGCATCGCACAAAGCATAAAGTCTTCGTGGAAGTTGAAAATCGTGTTAGCGACAAAAAAATAAAAGTTGGACTTCGCGGTAGCGCGGACAAGCAATGCATTTGTGACTACTGTGGAAAAAAGTTCGCCGGGAAGAAGTTCGTGGGCGCTCACATTCAAATCGTACATATGAAAAACACTCATAAACCTTGCGTTTACTGCGGGAAGTTACTAGCTGCTGCTCATATGACTGAGCATGTAAAGAGCCATGAGATGGTGAGAATCTTCACGTGTGAACATTGCGGCATAGTTTTGAGAACGAAACTTGGGTACATTCAGCATCTGCGATTGCACACTGGAGAGAAACCGTACAAGTGTCAGTATTGTGGAGAAACATTCTCGGCTTCATCACGAAAATCAGAACACATCAGAAAGAATCACAAATCTTCGGAAATTGAACTGAAACACGCTTGCGAGCTTTGTCCTGCTCGATTTCGTCTTCCTTATAGGCTGAAGAAGCATGTTGCAGCTGTCCATAAAACGCAGCCAGAAGATAAGATGAAGTTACTCTTTCAATGTGAGGATTGCAGCGACAAATTTGCTTCGTACAGAGGCCTGTTGCACCATAGTCGGAAACATCAAGATCAATTTAAGGTGTGGGAGGAGGCCGAGTTGCCGCGAGGAACATGCCGCGAATGTTATCAGACAGCTGTCGCAGCCATCCACTTCAGGCAATTGGTCTGGGAGTCGGCTCGGCAGTGGTCGTCCGTCGTAACCACGCTTTCCCACGTCCCGAACCCCATTAATGATGGAGCATACTACATTTGCTACGGCGAAACCACCACTATAATACAAGACCAGGCAAAGAGAATAATCGATGTCTCCCAAGCAGCTAAGAGACTTAATTGTGAAAGCAGCCAGAAAATCAGAAAACTTCGAAGAAAGTTTACCGGTGCAACTACGATAATATGTCGCGATTGTCACATGCAGTTTCCAACGCCACATCATTTGAACCAACATTTCAAGAGCTCAATGCGCCGCGTTTGCACGAAGTGTTCTCTTTTAATGCGAAAAGAGAAACTAGCTAAACACTTGCTTAATGCACATAATAAAAAGGTTTTCTCGTGCAAATTGTGTCATCAGCTTTTCGATGAGTCAAAGGCTTTAAACCGACACGTTCAAGTGTTTCACGGGCCTGGTTCACATCAATGTAAGGTCTGCGGAGCTGGGTTTTTGAACGCAAGAGCTCTCCGAGCACACAGTTATACTCACACACTGTTTAGCTGTTCCTTTTGTAACGCAAGCTTTGAAAATCGTAAATGCTACAAATATCACAAAAATCAGTGTAATTACAAGGATTCGGACAGTAAAGAATATCAGCCTGAAATGTATGAATGTCACGACTGTGGAAGCAAGTACACAAAGAAACCTTCCTTAAGGATCCATATTATTCAAAAGCATTTGAATGTTCTTCCATTTATTTGTCAAGTTTGTGGCAAGCGCAGTTCTAATGCCGGCCATGCTAAGGCGCATGCCACTATACATATGACCGAAAGGAAGATATATCAGTGCTACTGTGGAGCGAAAATGCGAACGCAAATAGGTTATCACATGCATCAGAGGATCCATACTGGGGAGAAGCCTTATCAGTGCAGTGACTGTGGGGACAGATTCATATCAGCTTCGAGACGGCTAGATCATGTAATGAGAAGACACAGAAGTACCAAGGATATGAAACACAGCTGCAATTACTGCAGCGCAAGGTTCTTGAGACCTTTCGAGCTGAAAAAACATCTACTAAATGTTACAGAAGAAACATCATTTCCTCGAGGATTATGTACCGAGTGCACTACCACGGCAGTTTCTGCCTTTGAATTCAAAATTTTCGTTCAAAAATCCCATGTACTTTGGACTACTTGTTTAAACACCCTGTCGATATTGCCAGGGACTCAAAGCTCTAAGTCCTTATACGCAATCGTCGGAGAAGATTTGTCACTACAAACTGTTGGGGACTTTACCGGAGACGCCAAAGTTTTGCTAGACTTACTGTTAAATAAGTTGAAGAAAAGGCAAAAAACAGAAAAACGGGCGAAAGGCAAAGGACGCACAGGTCCGCCATGCAAGTGTACAGATTGCGGTAAAGCCTTTCTTAGCCCTTACTATCTCAACTTACACTTGAAAAATAGCGGCCAAAAGGAAGCGTGTTGGTTTTGCGGTGTTGTACTTATGAGAGGTAAAGAAATGAAGGATCATCTTTTGAAAAAGCACTACTTAGAAGTTCTTTCGTGTCCCGATTGCCCTAAGCTTTTCACCCAGGAATTAGAGTTGAAAGTACACATAAAAAATAATCACAAAACCGGAGCTTTAACTTGTGGCGACTGCGGAAGATCATTTCCAAGGCATGCATCTTTTGAAGCGCATTCTCAAATGCATGCGGTAAGAACTTGTCGCGCTTGTGGTACTCAATTTACTAGCCGCGGATGTTACAGAGAGCATAGAAAAATATGCGAACCAGATGCAAAACCAGACATGAGAATGATACCGGCGAGTAAACGATCGAATGTCAGAGACCCCTCGACATACACTTGTGATTACTGCTCAAAGACGTATCGATCACGACCTCAGCTGAAGAATCACATAATATGGATTCATATGGACGTCCGCCCCCACCAGTGTCAATGGTGTGGAAAGAGGTTTTACACGCCGGCTCGTCTAGCAGAACATACGGTGGTACACACCAGAGTGCGGAACTTCGAATGTGACATTTGTGGTGCGAAGTTAGTTTCCAAAATGGCTGCGGTATACCATAGACGTAGACATACCGGGGAAAAGCCGTATGAGTGTGAAGACTGTGGAGAAAAATTCATATCTGCGTCTCGGAGATCCGAGCATGCAAAACGTAGGCACGGGAAAGGGTTACGCATGCAATGTATGTATTGTCACGCTAATTTTGTAAGAGGCCACGAACTACGAAAGCATGTAGAAAAAGCACATAGTTAA
- Protein Sequence
- MTREVNIKALVSHVVNGDGIHKCRICMGDTSEGQVYLGDTVMMDGDKPVTLSELLEVITGVEVQLEDDMPAGLCTVCSTSALNAAHFRMFCRQASEQWQTALLLLANISSVSIKANKAILIILGQNKMTIVDRFQREEKRSDIEKIESKVKSKLFKREKRIVAGCQCSDCGKKFKYPQHLHQHLKESTDFKRACHICAKIMARDDLISHMNNDHGRKPYDCKKCPALLHSYSQFKRHEVKAHSKGSCFCGDCGRSFKSLHAFHAHQSVHRLKTCPRCDKLFRNQTCYLYHVKKCCNLDSNRQDTHRTKHKVFVEVENRVSDKKIKVGLRGSADKQCICDYCGKKFAGKKFVGAHIQIVHMKNTHKPCVYCGKLLAAAHMTEHVKSHEMVRIFTCEHCGIVLRTKLGYIQHLRLHTGEKPYKCQYCGETFSASSRKSEHIRKNHKSSEIELKHACELCPARFRLPYRLKKHVAAVHKTQPEDKMKLLFQCEDCSDKFASYRGLLHHSRKHQDQFKVWEEAELPRGTCRECYQTAVAAIHFRQLVWESARQWSSVVTTLSHVPNPINDGAYYICYGETTTIIQDQAKRIIDVSQAAKRLNCESSQKIRKLRRKFTGATTIICRDCHMQFPTPHHLNQHFKSSMRRVCTKCSLLMRKEKLAKHLLNAHNKKVFSCKLCHQLFDESKALNRHVQVFHGPGSHQCKVCGAGFLNARALRAHSYTHTLFSCSFCNASFENRKCYKYHKNQCNYKDSDSKEYQPEMYECHDCGSKYTKKPSLRIHIIQKHLNVLPFICQVCGKRSSNAGHAKAHATIHMTERKIYQCYCGAKMRTQIGYHMHQRIHTGEKPYQCSDCGDRFISASRRLDHVMRRHRSTKDMKHSCNYCSARFLRPFELKKHLLNVTEETSFPRGLCTECTTTAVSAFEFKIFVQKSHVLWTTCLNTLSILPGTQSSKSLYAIVGEDLSLQTVGDFTGDAKVLLDLLLNKLKKRQKTEKRAKGKGRTGPPCKCTDCGKAFLSPYYLNLHLKNSGQKEACWFCGVVLMRGKEMKDHLLKKHYLEVLSCPDCPKLFTQELELKVHIKNNHKTGALTCGDCGRSFPRHASFEAHSQMHAVRTCRACGTQFTSRGCYREHRKICEPDAKPDMRMIPASKRSNVRDPSTYTCDYCSKTYRSRPQLKNHIIWIHMDVRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFECDICGAKLVSKMAAVYHRRRHTGEKPYECEDCGEKFISASRRSEHAKRRHGKGLRMQCMYCHANFVRGHELRKHVEKAHS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01438240;
- 90% Identity
- -
- 80% Identity
- -