Mvio019291.1
Basic Information
- Insect
- Megathymus violae
- Gene Symbol
- RCOR3
- Assembly
- GCA_003671415.1
- Location
- PDGT01000003.1:1319136-1327071[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.8e-10 1.3e-06 29.0 0.0 3 46 133 176 131 176 0.97 2 2 0.046 66 4.3 0.0 3 19 401 417 399 420 0.91
Sequence Information
- Coding Sequence
- ATGGTTTTGGCTGAAAGAAGTAATGATGTACGAAACGGGAAGCGGTCGAGAGGGCCAAGCCCCAATGGCCATGGAAGTCCTGATTCGAGTTCTGAAGATGAAAACGCAGTAGTGCCATTTGCAGCTGAGAAAATAAGGGTGGGGCGAGATTATCAGGCTGTGTGTCCTGAATTGGAACCAGTAGAACAGCGGAAGCCAGATCTGATCTCTGATAGGGCACTTCTGGTCTGGTCTCCTACTACGGACATTTTAGATTCCAAATTGGATGAATACATAACAACAGCAAAAGAAAAATATGGATACAATGGAGAACAAGCTCTAGGAATGTTGTTTTGGCACAAACATGACCTCACTCGGGCTTCTATGGATCTAGCAAATTTTACCCCTTTCCCAGACGAATGGACCGTTGAGGATAAAGTGCTCTTTGAACAGGCATTTCAGTTCCATGGCAAAAGTTTCCATAGAATAAGGCAAATGTTACCAGACAAATCAATTGCATCGTTAGTCAAGTACTACTATTCCTGGAAGAAAACTAGAGCACGTACATCCTTAATGGATGTGGTAGGTGAGGGTCGCAATGCTGCTGGATCAGGTACAGGCAAGAGGGAATCTGGCGTAGGATCTGAGCCGGGCGGCTCAGACAAGGAGTCTGATAATGATGAGAAGAAGTGGACTATCCACCGCGGTATTGTCCGCGGGGGCAAGGCCGCGGCCGCCGGCGGGCCCGCGCTCCGAGCCGGACACACGAGCGAGGGCGAAGGCGGCGCACGCGGGGAGGCGCGGTGCACTGTGTGCGGCATTCTGTGCAACCAAACGACGCAACACAACTCGCACAAGTTGTGTCAGGCATGCCTCGTGCACGCCAGACGCACCGGTACCATGAGGCCGCTATGCGGGCCGTCCGGCAGGCGCGGGCCCGGCTCCAAAAACCAACGGTACAAGCACCGGCTGCCGCGGGGCATTTACATCAATCACGACGATCTGGTCGCGATGGCCACTGGCCCCCAGCCCGGCGATCCCCCTCAGCCGGGCCTTATCAATCAGGGCGAAGCCATTCTCAAGGCAATGGATAGAGAAATTATATCCCTCAAGAGACAAGTCCAACAGAACAAGCAGCAGTTGAGCGCGATGAAGAGAAAGGTGGGCGACGCCGGCGTCGAGGAGTTTCGCCCCGGCGAGCCGCCCGCCAAGATCAACTCGCGGTGGACCAACGACGAGATATTGATGGCGGTCACCGCTGTCAGGAAATACGATATGGGCGCCGCCATTCCAATCGCTAGCGGCGGCGCGCTGACGATTTTTCGTCGGCGGCGGCGTAGCGCCGGCGACGTGGATTATTATTTTTTTTTAAGAAAATCTTTATTTATCTAG
- Protein Sequence
- MVLAERSNDVRNGKRSRGPSPNGHGSPDSSSEDENAVVPFAAEKIRVGRDYQAVCPELEPVEQRKPDLISDRALLVWSPTTDILDSKLDEYITTAKEKYGYNGEQALGMLFWHKHDLTRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVGEGRNAAGSGTGKRESGVGSEPGGSDKESDNDEKKWTIHRGIVRGGKAAAAGGPALRAGHTSEGEGGARGEARCTVCGILCNQTTQHNSHKLCQACLVHARRTGTMRPLCGPSGRRGPGSKNQRYKHRLPRGIYINHDDLVAMATGPQPGDPPQPGLINQGEAILKAMDREIISLKRQVQQNKQQLSAMKRKVGDAGVEEFRPGEPPAKINSRWTNDEILMAVTAVRKYDMGAAIPIASGGALTIFRRRRRSAGDVDYYFFLRKSLFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00970356;
- 80% Identity
- -