Basic Information

Gene Symbol
-
Assembly
GCA_003671415.1
Location
PDGT01000028.1:1121530-1123836[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1e-11 1.5e-08 35.2 0.3 1 45 261 307 261 308 0.94
2 4 1.4e-07 0.00021 21.9 0.1 2 44 315 361 314 363 0.93
3 4 1.4e-08 2e-05 25.2 0.0 1 43 367 409 367 411 0.96
4 4 1.4e-07 0.0002 22.0 0.0 4 46 420 464 418 464 0.95

Sequence Information

Coding Sequence
ATGAGTGACTCCGAAATGGATATGGAATTTGATAGTGAAGAAGAGTTAGAGCAAATGCGAAAGATAAGACGAGTAATGGCGTGTGATGATTATACGTCATCGTCACCACCGAGTACAATATCAACCGGTCAGCAGTTGCAGGTATCAGAAGGCGGCAAAGAGTCGACATTTCGTTATGTAGATTTTACTTTATTGCTCAACACACAAGTAATTGTTAAGTATAATCAGTTCGAGAATAATATGGACCGTAATTTAATTGATTGCCACGATAAGCTTAAAAAAGTTTCCGGTCAAAACAAGTCTGATGCAGAGAGAGCTGAATCATTTAGGTATATTAATTGTGGCAGGCCTTACTTCAAAGATAAAGAAAACTTTCCAGCTCCTGATAATGAAGATACGTTGATCATGGCTAAGAATCATATGTATGACTTCTCTTCCATCACTTCAGTACCTGGGTGGACAATGCGGGATAAAACTCAGCTTTGGAACCAAATAGAGAAAATGACAAAGGATATGAAGAAAAAAGAATTACTATCGACAATAACTGGACTGAAACGAGATGCAAAAAGAAAGAATTTGAATGAAAAGAAAATTATTGAGAAACAAATCAGTACAATTAAGAAGGAAATAAATAAGCTTGCTAATAAAAAATTAGATGATATAGCTTTGCCTATTGATGAGGAATATGACTGGGAAGAAGTGACATATTCATTGGATCGTAGGCACAGTGCTGCCGAATATCAATCGTTATGGAAATTGTATTTGCATCCAAGTATAAATAAATCTAACTGGTCAAAAACTGAGCATCAATTGTTACAAAAAATAGCTTATGAGCATGACTTACGGGACTGGGAGCGCATAGCTAAAGAAATGGGCAATAACCGTACAGGATACCAATGTTTTGTTTACTTTCGCACAAATATGAATAACACTTTTACAGGAAAGAAGTGGTCAGATGAAGAAGTGGATTATTTGTTGAGATTAATCGAGTACTACAGGGAAGAGCACTACATTCCTTGGGTCAAAGTGGCAGCCTTGATGGAAAATCGTACTAAAATCCAGATTTATAACAAATATATTAGGCTAATGGAGCATAGAAAAGGCAGGTTTTTATTAGAAGAAGATGCTGTCATACTTACTTGTGCTGATGCCTTTGGTTCAGACTTTAAGAAAATGGCTCAATTTCTGCCTGGACGGTCAATAGCCCAGATTCGTGTTCGATATCAAGCATTAACCAAAAAAAGAGTTTCAGCAGTATGGACAGTAGAAGAAGATAGAAAGCTACTTCAGTTGTTGTGTCATCAAGACAGTGCAACAAATTATGCTAGTATAACTAAATATTTTCCAGGCAAAGACCGAATTCATATAAGGGCTCGGTACGTCACTTTGCTTAAATGGATGAGAAGAAACCCTAATGCTGATATTATCAAAGCCCCCAGGCGAGGTGCACGCCGTCTAGGGCATGGTAAAGCTTCTGAGAACTTAAATGTAGCCATTGAGAGTTTAAAGATTCGTATACAAACTGAAGCTAATAAGAAAAGAACTAACAGAATTAATGAGGATTCAACAGAAGATGCTATAGAAGATAGTATTGTTGCTACATTAATTAATGAAAACATTTGCAGTGAAACATTAAAGAATGATAGCTATGGTTCAGATCATTTAACAATTGTTGACAATGATTCTAACATTGTGTTTGATGCAGTAAATGAGGGTAATTTGCAGAAAATACTTCTTATATTGAGAGCGAAACTAAATAAAGAGCTTTTTGAAAAACGTCACATTGAACCCAATAAGTCAAAATTAAATACACCAGACCATCAGACATTCGTAGTAAAAGTAAAATCTTATTCAAAACAGAACAAAATAAAGAGTATAGAAGTTAATGCACCTCCTGACATTTGGGGAAACCACACATTCAAAAGTCTGGAGTATGTGTTACCACCTCAATATGCTACAATCACTGGCTGCAAAATTTTAATGACATTTGTAGCAACCAAACAAAAGATGGACGACAAGCAAATGGATATGTTAAATTTTTCTGTAATGGGGAGAAGAAATGTGATTTTACGTGAACAGTTAGATATTTTGATGGAAAGATTCAATACATTGTTTTTATGGCCAATGTTGCTTTCTAATGAAGGTCCGAATTTGGATACCGTTCGTGGTGGGCGCTGTACCACAATGAACACATATATTGGATTATGCTCTGATAGAGACAGTGACAATTCTGAGGGAGAAGTATATGAAACTCGTGAAAGAGATGTTACTATAGATATTACTTCAGAACCAGAAGACACTAATTAG
Protein Sequence
MSDSEMDMEFDSEEELEQMRKIRRVMACDDYTSSSPPSTISTGQQLQVSEGGKESTFRYVDFTLLLNTQVIVKYNQFENNMDRNLIDCHDKLKKVSGQNKSDAERAESFRYINCGRPYFKDKENFPAPDNEDTLIMAKNHMYDFSSITSVPGWTMRDKTQLWNQIEKMTKDMKKKELLSTITGLKRDAKRKNLNEKKIIEKQISTIKKEINKLANKKLDDIALPIDEEYDWEEVTYSLDRRHSAAEYQSLWKLYLHPSINKSNWSKTEHQLLQKIAYEHDLRDWERIAKEMGNNRTGYQCFVYFRTNMNNTFTGKKWSDEEVDYLLRLIEYYREEHYIPWVKVAALMENRTKIQIYNKYIRLMEHRKGRFLLEEDAVILTCADAFGSDFKKMAQFLPGRSIAQIRVRYQALTKKRVSAVWTVEEDRKLLQLLCHQDSATNYASITKYFPGKDRIHIRARYVTLLKWMRRNPNADIIKAPRRGARRLGHGKASENLNVAIESLKIRIQTEANKKRTNRINEDSTEDAIEDSIVATLINENICSETLKNDSYGSDHLTIVDNDSNIVFDAVNEGNLQKILLILRAKLNKELFEKRHIEPNKSKLNTPDHQTFVVKVKSYSKQNKIKSIEVNAPPDIWGNHTFKSLEYVLPPQYATITGCKILMTFVATKQKMDDKQMDMLNFSVMGRRNVILREQLDILMERFNTLFLWPMLLSNEGPNLDTVRGGRCTTMNTYIGLCSDRDSDNSEGEVYETRERDVTIDITSEPEDTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00970354;
90% Identity
iTF_00970354;
80% Identity
iTF_00970354;