Mvio020916.1
Basic Information
- Insect
- Megathymus violae
- Gene Symbol
- JARID2
- Assembly
- GCA_003671415.1
- Location
- PDGT01000004.1:4951511-4967634[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9 1.4e+04 -2.8 0.1 62 88 281 307 248 308 0.49 2 2 2.9e-21 1e-17 64.9 0.0 6 89 736 816 733 816 0.93
Sequence Information
- Coding Sequence
- ATGTTTACAAGGAAATTCCATGATCAGCGCAAGTTTGCTGAAGGGGTTCCCATCTCTCCCAATAATGTAAGTAATTCCGAACCGAAAATAGGCGTAGCTCCAAAGAAGAGAAAACAAAATAATGTACGTAAGAACAATAAGGAACATGATAATGTGTCGATTAGAGGTTTAAATACTAATAAGGAGCCCTTGGTGTTGCTGGAAATGTTGACAAACAGTCAAAATAGTACTAATACCATGAATCAAAGACCATACGAAGAACCACATGATCCACCCAAAAATCACAATTCTAATAAAAATCCATCTGACATAACTTCTGATAAACATTTAAATAAATTAAAAATGATTCTCCGATCACGTGTCGCTAATCAAAATAAAAATCAAGAAAAACACGTTTCAATGGATATCGTTGAACCACAAGAACCTACTACTGAATCTCATGTATTCAAGCAAAACATTAACTCTGCGGAGTGTATAGATCATAATCAGTTTGGAACTGACAATGTGACTCTAACTAGTATCCCGAATATGGAAAATTTTGGTAACGCAAATGATGGTCGCAACTCTGACTTGAATGTCACGACTGAAATCAGGCCCGTACCAACCTCAAAACGTATTAACCGTAAGAATACAATTGATATATCTAATTTAAATGAGGTCTTGAAAGTAACATCCTTTGCTTCAACCTCGAAATCCATTAGCAGTAATATGTCGAATTTCTCTATAGATGAAGATCAGCCACTATCACATTATTGCGAAAAGAATGTACTAGTGCCAACAACAAGGCAGAAAGTAGTTAACATAAGAACACAAAATAAGGCTGTGAAAAAAACAAACACCTTGAAACATAATACGCGGCGACAACTAAAAAAATGTGTTACTGATGTTGAAGCACAATATGCAAAAGCTATACTGGAGTATTTGGAAAAGCACTTCTATCTTTTGTCTTGTAACAAAGAAAACATTAAGTTCGAAATTGATAATGAACGAGTCTGTATAGGGAAGAATAAAATGTTATCTATAACTAACATCAACCCATCAGAAGTTGCAAGTTTGAAGAGTCCTGTAATCTGGAAATCAGATAATGAAGAGTTAAATAAACGAGATGAATTGGATCCCAACGACATTGTAAAAGATGAATCAACAGATGGCTTTGACAATGGTAACTGCCTAAGAAATGATAATGAGTTATCGGTACCTCAAACGTCTAATACAGCACCTATGATGTGTGATCAAGAAAATGATAATAGCCAACTACCAACACCCATGCAACCAAAGATGAGCCACATGTACACATATTCACGTGGTGACCAAAGTAGCGTAAGAATAATATCTGATGTTTTGGTATATCAACCATCAGATACCAGGGAAACGCCAATTGAACCTCAGTCCACAGGGCCAACAGTCAGTAATGTCCACAGTGAAAATTTTTCGCTTCCTCAACAGTCCATTCCTATAAATGATTCCACTGAGGAAAATAAAAATATACCTACAGATGGTTCCAAAAATCAAATATCACCTACAAGTAACCATATCGATTCAAATTTCAATTTTTATTCTCCTGTGAGCAATTCTCGGATTGGATGGGGAAACACGTCGTTTATACAGCGAAGTATACCTACAGACAATGTGATTGAAGAAAGCAACCTTAACCAAATGAATATCAATACCGTTTCAAGTGTCACCGTAAATCCAGAATACAGCAGGGCATCCGGAAGCAAAAGAAATGCAACCCCCGACACAAGTAGCGTTCAAGAATCTGTCTCCGGGTTAACATCAAAATCATTAACAGTTGGGTTATGTGATATAACATCACAAAATAATATGGAGATTTCTGATAATGAAGATACATCTACGAATTGTAGTACCCCAATAGATACATCAACAAATATATGTAAACCATCAACATCGGCATTTATAAACAAAAACAGCTTGTTAAGATCAAAACCTGTTAGCCATTTGCAGCCCGCTACAGGACAATCGTTTTTAAATGCACCTGTTTTTACTCCTACTGCTGCAGAATTTGATGATCCAATTAATTATTTCGATTCCATTATGCCTATCGCCAGCAAATACGGTATCTGTAAAGTAGTACCGCCCAAGGACTTCAAACCCTCATATGTTTTAAATGAGGAAGTTGTGATCAACGTTACAAACCAATACATAACTCGTCTATATAGTAGGTGGGGTCCGGGCTCAAGAGAAATGTCAGCAATTAAAGCATTTTTAGCCTCACAGAGCGTGTTTTTGAAGGGAGCTCCTTTGCATGAAGGTATAGAAGTGAATTTACCAAAATTACATCAACTTGTGCAGCGACATGGCGGCTTGCAGAAAGTTATAGAACGCAAATTGTGGAATCGTGTAGCTGAAGAAATAGGTTTCACGAGAGGATGTAATTCAGAAAAAAAGTTAAAAAAAATATATCATAAATATCTACTTCCTTATGACAATTTATCATCCATGGAGCGGGCAGAAATTATGTCCCGGGTAGAGCACGCTTGGTGTGAAAAATATCGTAAAATGACGGAACGTGCGATTGAACCATTAAACAAACAAAATAAGCTTCTTGAAGGGGATTCTTCAGAAGAGGATGAAAGCGAATCTAGCGAGAACGATCCACACATTACAAAAGCACTTAACGAGGCAGAAGAATGTGTCACAGAAGGACGAAAGATGAATGTGACTACTTTCAAAAAGCTGGCATTAAGAGCACTAGCAACATTATTTCCAAATATGAAAATTCCAATCGAACTTCATAAACTAGAAAGGTATTACTGGCGACTGCTGCTAACTGAATTTGAACATTTATGTGTAATGTCTGCCAGTATTGATAGTGGCACCGCCGGATTTGGTTTTACCGACGACGGATATGGATCATACGAAAGTCACCAATGGATCCTCAAGAACCTGGTTTTCAACGCCAATAACATTTTACGATACCTCGGCAGCGTACTTGGTGTAACAATTCCCAAACTAAATTTAGGTATGATATATTCAACAACTTGTTGGCATAGAGCACCTCATGGATTGCCGTGGATGGAGTACATGCATGACGGTGCTCCAAAACTATGGTATGGTATTCCTGATGAACAAAGCGAGAGGTTCCGAAAAGCCGTTCAGTCACTTTGCCCGGCGTCGTGCCAAAATAAGACAATTTGGTTGCCATCGGATATTGCTATGATCCCTCCGAACCTGCTCCGCGAGCAGAACGTGATTCTATCACGCGTTGAGCAAAAACCAGGAGAATTTATTATTGTTTTCCCAAATGCATATTCATCTTCTATATGTACAGGATTTACTGTGTCCGAAAGTGTATATTTTGCTTCAAAATCATGGTTAAGAAGTGCTTTACAATTTTTCATGGCTTACGAAGTTTCTAGAAGGGTGGCCGACCGTTACGGTGAGGCAAACAATAGAGGCAATAAAAGAGAAATCCAGGTAGTAATAAAAACTACCTGGGTCACTCCAGGCCAATCTGGCCCGTATACCTCAGGCAAAAGGGGCGAGATTAGCATAGATGAGGGCCGAAATGGGGTTGTTTACCTGACCCGCTATTGTTATGTCGATTTCCGGGAATTCCTGTTGTTGTTGTTTACTTCAACGAAGGGCGTGGAAGGATCTGGAAGCCCGGAAATGGATATAAATAGCGGGCAGGGTCGGCCACAAGGCATTCGGTCTCCGGATACGAAGCGAATACCTGCGATCTACGAGTGTAACTGTGATTGTGAAGAGTGTGTGAAGTAA
- Protein Sequence
- MFTRKFHDQRKFAEGVPISPNNVSNSEPKIGVAPKKRKQNNVRKNNKEHDNVSIRGLNTNKEPLVLLEMLTNSQNSTNTMNQRPYEEPHDPPKNHNSNKNPSDITSDKHLNKLKMILRSRVANQNKNQEKHVSMDIVEPQEPTTESHVFKQNINSAECIDHNQFGTDNVTLTSIPNMENFGNANDGRNSDLNVTTEIRPVPTSKRINRKNTIDISNLNEVLKVTSFASTSKSISSNMSNFSIDEDQPLSHYCEKNVLVPTTRQKVVNIRTQNKAVKKTNTLKHNTRRQLKKCVTDVEAQYAKAILEYLEKHFYLLSCNKENIKFEIDNERVCIGKNKMLSITNINPSEVASLKSPVIWKSDNEELNKRDELDPNDIVKDESTDGFDNGNCLRNDNELSVPQTSNTAPMMCDQENDNSQLPTPMQPKMSHMYTYSRGDQSSVRIISDVLVYQPSDTRETPIEPQSTGPTVSNVHSENFSLPQQSIPINDSTEENKNIPTDGSKNQISPTSNHIDSNFNFYSPVSNSRIGWGNTSFIQRSIPTDNVIEESNLNQMNINTVSSVTVNPEYSRASGSKRNATPDTSSVQESVSGLTSKSLTVGLCDITSQNNMEISDNEDTSTNCSTPIDTSTNICKPSTSAFINKNSLLRSKPVSHLQPATGQSFLNAPVFTPTAAEFDDPINYFDSIMPIASKYGICKVVPPKDFKPSYVLNEEVVINVTNQYITRLYSRWGPGSREMSAIKAFLASQSVFLKGAPLHEGIEVNLPKLHQLVQRHGGLQKVIERKLWNRVAEEIGFTRGCNSEKKLKKIYHKYLLPYDNLSSMERAEIMSRVEHAWCEKYRKMTERAIEPLNKQNKLLEGDSSEEDESESSENDPHITKALNEAEECVTEGRKMNVTTFKKLALRALATLFPNMKIPIELHKLERYYWRLLLTEFEHLCVMSASIDSGTAGFGFTDDGYGSYESHQWILKNLVFNANNILRYLGSVLGVTIPKLNLGMIYSTTCWHRAPHGLPWMEYMHDGAPKLWYGIPDEQSERFRKAVQSLCPASCQNKTIWLPSDIAMIPPNLLREQNVILSRVEQKPGEFIIVFPNAYSSSICTGFTVSESVYFASKSWLRSALQFFMAYEVSRRVADRYGEANNRGNKREIQVVIKTTWVTPGQSGPYTSGKRGEISIDEGRNGVVYLTRYCYVDFREFLLLLFTSTKGVEGSGSPEMDINSGQGRPQGIRSPDTKRIPAIYECNCDCEECVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00970189;
- 90% Identity
- iTF_00970189;
- 80% Identity
- -