Mvio010378.1
Basic Information
- Insect
- Megathymus violae
- Gene Symbol
- tfap2e
- Assembly
- GCA_003671415.1
- Location
- PDGT01000030.1:1296789-1304777[-]
Transcription Factor Domain
- TF Family
- AP-2
- Domain
- TF_AP-2 domain
- PFAM
- PF03299
- TF Group
- Basic Domians group
- Description
- Activator protein-2 (AP-2) transcription factors constitute a family of closely related and evolutionarily conserved proteins that bind to the DNA consensus sequence GCCNNNGGC and stimulate target gene transcription [PMID: 2010091, PMID: 1998122]. Four different isoforms of AP-2 have been identified in mammals, termed AP-2 alpha, beta, gamma and delta. Each family member shares a common structure, possessing a proline/glutamine-rich domain in the N-terminal region, which is responsible for transcriptional activation [PMID: 2010091], and a helix-span-helix domain in the C-terminal region, which mediates dimerisation and site-specific DNA binding [PMID: 199812]. http://www.ebi.ac.uk/interpro/entry/IPR013854
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-82 1.8e-77 260.3 0.0 1 196 19 211 19 212 0.97
Sequence Information
- Coding Sequence
- ATGAAAGGGCGAGACGGGCTGGGCGGTGCCGGGTCGTGCGCACCCAACGACGTGTTCTGCTCGGTGCCCGGCCGACTGTCGCTGCTCTCGTCCACTAGCAAGTACAAGGTCACAGTGGCCGAGGTCCAGCGTCGGTTGTCTCCACCCGAATGCCTCAACGCCTCCCTACTAGGGGGTGTATTGAGGAGAGCGAAAAGCAAAAATGGCGGTCGGTTACTGCGGGAAAAATTGGAGAAGATAGGCCTTAACTTGCCAGCGGGGCGGCGGAAAGCTGCTAACGTCACACTCCTCACGTCACTAGTGGAAGCGGAAGCAGTACACTTAGCACGCGACTTCGGTTATGTATGCGAAACAGAGTTTCCAGCGCGAGCACTGGCGGAGTACCTCGCGCGGCAGTACGCCGAACACGACGCCAGGCGACGCAGGGACCTGCTGCAAGCCACCAAACAGGTGACCAAGGAGCTAATGGACCTGCTAAACCAAGACCGGTCGCCGCTGTGCAACACGCGACCACCGCACCTGCTGGAGCCGGCCATCCAGCGCCACCTTACGCACTTCTCACTCATCTCGCACGGCTTCGGCGGCCCGGCAATAGTCGCCGCCCTCACTGCTATACAGAACTTCTTGAACGAGTCCTTGAAACACTTAGATAAGTTGTATCCTCAAAGTGGTATGGTATCGTCATCGATGGACAAGACAAAAATGGACCCCGATATAAAGAAGTAA
- Protein Sequence
- MKGRDGLGGAGSCAPNDVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRLLREKLEKIGLNLPAGRRKAANVTLLTSLVEAEAVHLARDFGYVCETEFPARALAEYLARQYAEHDARRRRDLLQATKQVTKELMDLLNQDRSPLCNTRPPHLLEPAIQRHLTHFSLISHGFGGPAIVAALTAIQNFLNESLKHLDKLYPQSGMVSSSMDKTKMDPDIKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00922598; iTF_00076135; iTF_01155977; iTF_00112202; iTF_00825260; iTF_01158416; iTF_00044145; iTF_00277074; iTF_00408082; iTF_01142100; iTF_01429620; iTF_00150166; iTF_01082103; iTF_01154712; iTF_00341017; iTF_00942495; iTF_00197056; iTF_00649696; iTF_00113025; iTF_00113832; iTF_01387309; iTF_01340833; iTF_01316014; iTF_01331118; iTF_01333407; iTF_00840024; iTF_01138649; iTF_01542618; iTF_00696190;
- 90% Identity
- iTF_00651415;
- 80% Identity
- iTF_00076135; iTF_00277074; iTF_00408082; iTF_01082103;