Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_003671415.1
Location
PDGT01000001.1:16477280-16482245[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-06 0.0023 18.4 0.0 2 35 294 330 293 335 0.87
2 2 8.6e-11 1.1e-07 32.2 0.1 2 43 374 420 373 422 0.87

Sequence Information

Coding Sequence
ATGCATTTATACGTTGTGGTTTTATTGTCTTGTGCTCTGAGTGCAGCGGCGTGGGATGACGACGATTTAGAAGTGTTTGACGTGGTTGAAGAAGTCAATCAAAATTTCTATGAGATTTTAGGGGTATCACAGgatGCTACTTCAGCCGAAATTAAAACAGCTTTTAAGAAGCTGACTCTAAAATTGCACCCGGATAAGAATGATGCCCCAGATGCTGATGTACAGTTTAGAAATCTAGTGTCTGTGCACAATGTTCTGAAAGATCCAGGGAAGAGAGAGAAATACAATGAAGTGCTCAAAAATGGTCTTCCAAATTGGCGTTCAGCAGTATATTATTACCGCCACGTTAGAAAGATGGGACTGGTGGAGGGCTCCATTAtactattcattattatcacaTTCGGACAATACTGTGTTGGTTGGGCAGCCTACATCGAGAGGCGGTTCACAGCTGAACAAGTCCTAAACAGCAGAGGAAAAAAACATGCAAAGaaaactggtttcgataccggGTTGTCAGAAGTGTTGGATCAATTGCCAAAGCCTAGTATTAAAGATACACTGCCCTTCCAAATACCCAGAATGATGTGGTGGTCTGTGACGGCGATACCTCGTATAGTGGTGGAGATACATAGGCGAAGGAAGGAAAAGGAGGAAGAAGCGAGACGAAAGAAGAGgaaAGAGGAAGAGGAGGAACGGTTGCGGGTGGAACGAGAGGCGGCGGCGGAGGCGCGGGCCGCGAGCGGTGCGGGCGCGGCGCGTCGCCGACGCGGCTTCGTGCCGCCCGCGCGGGACCACTGCCTGCTCGACGCTGCCGACGAGCCCGTACACGACGATGCGCCAGCCGTTAAAAAGCCGGTGCCGCCGCCGGTGTCGGGCGGGCTGTGGACGGACGACGATCTGGCCGAGCTGGTGCGGCTGGTGAAGAAGTACCCGAGCGGCGTGGCGGAGCGCTGGGAGCGCGTGGCCGAAGCCATGGGACGTTCCGTGCCCGAGGTCACGCACATGGCCGCCAAGCTCAAGGACAACTGCTACCGGATCCCCGGCCAAGAGCCCCCCGAACCGGTCGTCGAACCACCTAAGAAGGTAAAAACACGTAAGACGGAGGAAGTGAGCGGTGGCAACTGGTCGCAGAGCCAGCAGAAGGCGCTAGAGGCGGCACTGGCCAAGCACCCCAAGGGCGGCGCCGGCGACCGCTGGCAGAAGATTGCAGCTGTGGTGCCGGGGAAGACCAAAGAGGAATGCATGCAAAGGTGTAAATACTTATCGGAACTATTGAGGAAACAGAAGCAGAAAGAACAAGAAGAGTCAAACAAGGAAGAGAACGGGGAAGCCGTCGACGAAGACACCGTGCCGGACGACGAGTGA
Protein Sequence
MHLYVVVLLSCALSAAAWDDDDLEVFDVVEEVNQNFYEILGVSQDATSAEIKTAFKKLTLKLHPDKNDAPDADVQFRNLVSVHNVLKDPGKREKYNEVLKNGLPNWRSAVYYYRHVRKMGLVEGSIILFIIITFGQYCVGWAAYIERRFTAEQVLNSRGKKHAKKTGFDTGLSEVLDQLPKPSIKDTLPFQIPRMMWWSVTAIPRIVVEIHRRRKEKEEEARRKKRKEEEEERLRVEREAAAEARAASGAGAARRRRGFVPPARDHCLLDAADEPVHDDAPAVKKPVPPPVSGGLWTDDDLAELVRLVKKYPSGVAERWERVAEAMGRSVPEVTHMAAKLKDNCYRIPGQEPPEPVVEPPKKVKTRKTEEVSGGNWSQSQQKALEAALAKHPKGGAGDRWQKIAAVVPGKTKEECMQRCKYLSELLRKQKQKEQEESNKEENGEAVDEDTVPDDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00971181;
90% Identity
iTF_01082391;
80% Identity
iTF_00971181;