Murs018509.1
Basic Information
- Insect
- Megathymus ursus
- Gene Symbol
- -
- Assembly
- GCA_003671415.1
- Location
- PDGT01000103.1:126648-131459[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-12 4.4e-09 36.2 0.0 3 37 157 191 155 198 0.94
Sequence Information
- Coding Sequence
- ATGTGCCCCGGTCGGACCAGACACGTTCCGTTCTACCGCGGGACGGGACGGGAGGAGGAGGAGAACAGGGCGAGGAGGGCCCTTTCCCCGACATCGATTGCATCGACAGAACCGTGGCGTCGAGATCCTCCAGTGCCCAGCCGCCGTCGCATCGCAGACGACCGATCCACAAATATCACGGACGCGACCGGCGACGGACGCGCAGCCTGGCCGCCGGGCACTGACGACGACGCGACACGACACGACTCTACGGACCCACCCACCTACGTACCTACTGGTCAGCGCACTGCGATTGGTCGCCCCGCCCTCGGCACCGCCCCCGGCCCGGCCGTCACCGCTCGCGGCACGGTCTCGCCTCACTCTATCAGTTCAACTGGCGATAGTGTTACATCACATCCTATCGTATCCAATGTGTTAATTAGGGATAGAcgttacaaaagaaaaacatgcaGAGCATCGTGGACGGTTGAAGCTCTAAATGAAGCGATGTCAAAGGTCACCAGTAAAGAGTTAGGGATCAACAAAGCTAGCAGGGAGTATGGCATTCCCAGTCGAACACTTCGAAGACACCTTGCATCAGGCAAAGGTAAAGGTAATTAG
- Protein Sequence
- MCPGRTRHVPFYRGTGREEEENRARRALSPTSIASTEPWRRDPPVPSRRRIADDRSTNITDATGDGRAAWPPGTDDDATRHDSTDPPTYVPTGQRTAIGRPALGTAPGPAVTARGTVSPHSISSTGDSVTSHPIVSNVLIRDRRYKRKTCRASWTVEALNEAMSKVTSKELGINKASREYGIPSRTLRRHLASGKGKGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00971165;
- 90% Identity
- -
- 80% Identity
- -