Murs011546.1
Basic Information
- Insect
- Megathymus ursus
- Gene Symbol
- -
- Assembly
- GCA_003671415.1
- Location
- PDGT01000012.1:2712017-2712625[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.4e-14 8e-11 41.8 0.0 2 37 14 49 13 58 0.89
Sequence Information
- Coding Sequence
- ATGGGAAAGAAAAAGGCTGCAGATCCAAGAAAATGGAGAGaagaaaatatgataaaagCAATAGAAGATGTCACAAGCAAGAAAATGGGAGTGAATGAGGCTAGCCGAACGTATGAAATACCTTCACGAACCTTACATAGACACATCATAAAAGGCTGGAACAGCAAGCAGAACATAGGTAGACCTTCTGAATTAGGTTATGAAAATGAATTGGGAGTCGTAGCTCACATTAAACGTCTCGAAGCTATAGGATTTCCTCTGGAACAGTCGAGACCGCAGTCTATTGCTTATGACTTTGCAGATAAACTAGGATTGCCTCATCGAttcaataatgataaaaagCAAGCAGGCTGGGATTGGTTTCAAGTATTCATGAGGCACCCACATCTAAGTAAAAGAAAAGCTGAAGGCCTGTCTCTGGCGAGAGCTATTGGTATGAATCGAAAAGACGTCGATAGTTatgttgaaatgtttttgaaagtATTAACTGATAATGATTTGATTGGTAAACCcgaaagaatttataaaatggaCGAGAGTGGTATTCAAGTGAACAATAAAACTAGACGGGTAGTAGCCAGTAAATGTGCAAATGCAAAATGTGTTTAA
- Protein Sequence
- MGKKKAADPRKWREENMIKAIEDVTSKKMGVNEASRTYEIPSRTLHRHIIKGWNSKQNIGRPSELGYENELGVVAHIKRLEAIGFPLEQSRPQSIAYDFADKLGLPHRFNNDKKQAGWDWFQVFMRHPHLSKRKAEGLSLARAIGMNRKDVDSYVEMFLKVLTDNDLIGKPERIYKMDESGIQVNNKTRRVVASKCANAKCV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00971160; iTF_00147227; iTF_00113250; iTF_00415921;
- 90% Identity
- iTF_00971160;
- 80% Identity
- iTF_00971160;