Murs020865.1
Basic Information
- Insect
- Megathymus ursus
- Gene Symbol
- -
- Assembly
- GCA_003671415.1
- Location
- PDGT01000113.1:466032-466364[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-15 2.1e-12 46.9 0.0 1 43 15 58 15 60 0.95
Sequence Information
- Coding Sequence
- aTGGTGAAAACATACAAAAGAAAAACCAACAGAGGAGAATGGTCTgaagaaaacatgaaaaatgCGGTGGAGTCTGTGATGCAAGGTACAATGGGTTGCTATCGAGCAGCAAAGACATATGGAGTGCCCCAAACTACGTTGGAAAGAAAAGTTAAGAAAGTTCGTGAAAGTACGGAAGAAAATGCTTTAGGTACAATTAAAATGAAGGTAAAATTATGTCCTAAAACAAATGTGTTTTCTTTTGATGAAGAGAAAGAGCTTTGCgattatatattagatatggAGAGTAGGCTTTACGGATCCAAAGATCTGAGATCTTTCCAAAAGATCTGA
- Protein Sequence
- MVKTYKRKTNRGEWSEENMKNAVESVMQGTMGCYRAAKTYGVPQTTLERKVKKVRESTEENALGTIKMKVKLCPKTNVFSFDEEKELCDYILDMESRLYGSKDLRSFQKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00971157;
- 90% Identity
- iTF_00971157;
- 80% Identity
- iTF_00971157;