Basic Information

Gene Symbol
Kdm5
Assembly
GCA_003671415.1
Location
PDGT01000006.1:6599897-6645483[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.7e-25 1.6e-21 76.8 0.0 2 89 200 283 199 283 0.93
2 2 5.9 1.7e+04 -3.4 0.0 45 64 1391 1411 1379 1421 0.70

Sequence Information

Coding Sequence
ATGGCGCGGCACCGTTCGGACAGTGGAAACACGCCCAGCAATGTAAACTTCTGTCTATTCACAGAATTAAACGCTAACAAGCTCCAGTTCGTCCAGCGACGAGGGCCTCGCTCTGGCCCGGGACAAAAGGCCAAGCAATATGCGGGCGGAGGACTGCTCCGAGGTGGAAAATCCATAGAGGAGCAGGCGCTTGCAGCCGAAGAGGGTCGCAAAGCGTTGGGCGTGGACACAGAGGAGACACGCACGACCAACGCTTTGGTGAAACAGGTCGCCACAGATGTCGACATTATCTGTGAGATGGGAAAATGTGACGAAAATAATGTGCAAGTGAATATGGGGGACTCGGCGTCCCCCATGAAACCTGACAATTTCTCGTTTACCGTGCCTCCAGAGGCCCCTGTGTTCGAGCCCACCCCGGAAGAGTTCCTGGACCCGTTGGCGTACATTAGCAAAATAAGACCAATCGCCGAGAAGTCAGGAATATGCAAGATAAAACCCCCCGCGCACTGGCAACCTCCCTTCGCGGTGGACGTGGATCGGTTGCGGTTCACGCCTCGGATACAAAGGCTCAACGAATTAGAGGCGATCACTCGCGTGAAGTTGAATTTCCTGGACCAGATCATCAAGTTCTGGGAGCTGCAAGGCTCCGTGCTTAAGATACCGACCGTCGAGAGGAAGCCGCTCGATCTATATGCACTTCATAAGATTGTTAAAGAAGCAGGTGGTTTCGAAGCATGCTCGGCGGAGCGGAAGTGGTCGAAGATAGCCCGTCGGATGGGCCACCCGCAAGGGAAGGGCATCGGCTCCATCCTTAAGAACCACTACGAGAGAATATTGTACCCTTACGATGTGTTCAAGAACAATGGTGCCGTCGGAGATAATAAGGAGACGAAGATCGAAGTGAAAGGCGAACAAACACCGGAGAAGATAAACGGAGCTCGCAGCAGGTCCTCCAGCAAGCCGCCAGCGGCGACTCCGCCCCCGGCCCGCCGCTTCAAGAGCTCCGAGCCCGAGGCCGCCGAGGGCAGCCAGTCGGAGGGCGCCATGTCAGGATTTGACGAAAAGAAAACACCTATCAAGGAGGAACCCGGAGAGACTAGGCGCAGTCCCCGCGAGAACAAGTGGATGTCGACCGGTGGCAGCTGCGGTGCGCGCGCGCGCGTGCTGCGCTCGACGCGGCTGCGCGAGCATCGTATGAGCAACATGACGGTGTCGGTGACGCCGGCGCCGGCCGCCGCCGCGCTCGCGCCGCACCCCGACGACCCGCTCGCGAAGTACATGTGCCACGTGTGCGGGCGCGGCGACATCGAGGAGCAGATGCTGCTGTGCGACGGCTGCGACGACTCGTACCACACGTTCTGCCTGGTGCCGCCGCTCGCCGACGTGCCCAAGGGCGACTGGAGGTGTCCGGTGTGCCTCGCCGAGGAGGTGTCAAAGCCGACGGAGGCGTTTGGCTTCGAGCAGGCGTCGCGCGAGTACACGCTCCAGCAGTTCGGGGAGATGGCGGACCAGTTCAAATCGGACTACTTCAATATGCCAGTACACATGGTGCCGACGTCTACGGTGGAGAGAGAGTTCTGGCGCGTGGTGTCATCCATAGACGAAGACGTCACCGTGGAGTACGGTGCCGACTTGCACTCTATGGACCACGGATCCGGATTTCCAACAAAGTCCAGCGCTCACCTGTACCCCGGGGAGCAGCAGTATGCCGAATCCAGCTGGAACCTGAACAATCTTCCGGTGCTCGAAGGATCGGTACTGGGACACATCAACGCTGACATATCTGGCATGAAGATACCTTGGCTGTACGTGGGCATGTGCTTTGCTACATTCTGTTGGCACAACGAGGACCACTGGTCTTACTCTATCAACTACTTGCACTGGGGGGAGCCCAAGACATGGTACGGCGTGCCGAGTTCGAAGGCGGAGCAGTTCGAGGCGGCGATGAAGGCGGAGGCGCCCGAGCTCTTTCAGCTGCAGCCGGATCTGCTACACCAGCTGGTCACCATCATGAATCCCAACGTACTTATGAAGGCCGGCGTGCCGGTTTACAGAACGGACCAACATGCGGGTGAATTCGTGATCACGTTCCCGCGAGCCTATCACGCGGGATTCAACCAGGGTTACAACTTTGCAGAGGCTGTCAACTTTACACCCGCCGACTGGCTCAAGATGGGCCGCGAGTGCATCGCGCATTACTCGACGCTGCGTCGTTACTGCGTGTTCTCTCACGACGAGCTAGTGTGCAAGATGGCGCTGGACGCGGACTCGCTCAGCGTCACCGTAGCGCTGGCCGCCTACCGCGACATGCGCGTCATGCTACACGACGAACGCAAGCTACGGAAGGCGTTGCTCGACTGGGGCGTGACAGAAGCGGAGCGCGAAGCGTTCGAACTGCTGCCGGATGACTCGCGGCAGTGCCAGCTGTGCAAGACTACGTGCTTCTTGTCGTGCGTGACGTGCGCGTGCACGCCGCACGTTGCGTGCCTGCGACATTGTCGCGAGCTGTGCGCGTGCGCGCCCACCAGCCACAAGCTCAGATACCGTTACACGTTGGACGAGTTGCCGGCTATGCTAGAGCGGTTGAAACGAAAGTCGGAGCAGTTCCGAGAGTGGGCGGAGGCCGTGCAGAACGCGCTCGACCCCGACACACCCAAGACCTGTGACCTGGATGGGCTGCGAGCGCATCTCAAGAGGGCACATGATCTCAAGATGCACAAGACGGAGCTGGTCCGTGCGCTGGAAACAGCTATCGAGGACGCAGAGAAGTGCGCATCGGTGATTCAACAGTTAGATCTAAACAAGATGCGTACACGCACGCGTCACCACGACCCCAAGTACCGACTGTCTATCCACGAGCTAACGCTGTTCGCTGCGGAGATTGACGGACTCGCTTGCGTGCTTCCGGAAGGTTCGGCTGTCAAAGAGGTTCTCCGTCAAACTGCTGAATTCGAAGACCGTGCGACAGAATTGCTGAACAAAGATCTAGAAGATACAGACGCTGCATCCGTTAGAGAGTTAGAAGAAGTGGTGGAGCTGGGCTCGCGGTTGTGCATTGTGTTGCCGCAACTTAGCGCATTGCATGCACGACTACAGCAGGCTCGCTTCCTGCAAACAGTGGAGGCGCACCGCGACGACTGTGCCACACTCACGCCCGAGGTCATCGATAAGTTGCTCGCAGAGGGCGCCACCGTCGTGCCCCATCGACGCGTCGAGGCTGAACGGGCGCATCTCTATAAGTTGAAGGGCCAAGTGGAGGAATGGGAACGCAAGGCTCGTGCAGTGCTGATCGAAACAACCCCGCCACGGTCCCGCGAATCAAGCGTGGAGCCCGAGGAGCAGCATACGACGCTTGCCGAAGTGGAAGCGCTGCTGGCTGAGGGAGACGAGATTGAAGCAGCGCTACCATCGCACCATGCACTCCACACGGCGGCTGCACACGCGCGCGACTGGCTCGCTAAGGTGGAAGAGATGCAGTCGAAGGAACTGTACCCGTACATGCACAGCGTGGAGGCGTTGGTGAAACGTGCCAGCCAGATCCCGCTGGCGCTGTATGAGAAGCAGCAGCTGGCAGCCGCGTTGCAGTCCGCACGGGAGTGGAAGAAGGGTGCGGCCGAGATGTTTCTCAAGAAGAATTGGCCGTACACGCTATTGGAGGCGCTGTCACCTCGCACGGAGTGTCCCGGTGCTGGCGCAGGCGCAGGCGCGCGACGTCGCGGCCGCACCGCCGACACCGCGTCGTTGGAGGCTGTCACTCTGCTGCGGCACTTTAGCGAAGATGCCACGCCCACCGAGATCGTAGCAGCGTTCAAGAGCGCCGAACATCGTGAGCTTGCTGCCATCAAGGAGCTCAGAGCTCGTAACCTACGCAAGGAAGTTCGCGCGCCGCCCACCAACGGTGTAACGTTCTGTGTGTGCCAGAAGCGGCAATACGGCGTCATGTCGCAGTGTGAGCTCTGCAAGGACTGGTTTCATTCGTCGTGCGTGTCGAATCTACGCGAGCGGTCGCCGCGTGGCGACACGCCCGAGCCCACCGACCAGCCGTTCCCGTGCAGCGAGCCCAAATTCCTGTGTCCAGATTGCGTGCGCACACGCCGTCCGCGTTTGCATCGGATCCTCGCACTTTTGGTGTGGCTACAAAAGTTACCCGTCCGGCTCGCTGAAGGCGAAGCTCTACAATGCGTTACGGAGCGCGCGATGGCGTGGCAGGATGCCGCGCGCGCGCTTCTCAGCAGTCCGCAGCTCGCCACGCTGCCCCAGCAGCGCTTGCCAGAGAGGAAAGATCATACACATGGCTCTAGgTCGTCTGCGAGCGTCGAGCACGCTTACAGCGCAACCCCGCGGTCGCCGAGCACTCGAGTAGCTCCCGGCCTGCTGCAAAAATTAGAGGATCTTATGTTAGAGGGGGATCTACTAGAGGTGCGCCTCGAAGAGCAGTCGATGGTATGGGGCGCGGTGGTGGCGGCACGCGCGGCTGAGGGGCGGCGCGTCGGTCGCGTGCTGGACGCCGGGCGGCGGAAACGCGCGCAGCGCACGCCGCGACCGCACCACCAGCTTAAGAGGACGCGGCCGCACCATGTTCCGACAACAACCAAGACCACTATGAAACGTGGAGCATCCAATACAACAAACTATTTAAATAGGAAACAGGCAGTATCATCAGGCTCCGGACTAATGATGCGTAAGCACTACATGGCGCGCCAGGAGCGGCGCAAGCGAGGCCTGGCCGCCACCACGCGAGGGAAACATCCGCGACAGTCCAGACTAGAGCACGACAGCAGCGAGCGCGacggcggcgcggcgcgcggGCAGCAGCAGCACTTGCCCTTCGTCTGCGGAGGACGACGAGGACTGCGCCGCCGCCGCCTGTCTCCGGCCCACTGGTCGGTGTTGGTCATTCACCTCGACGAATCGAGTGTTCCCGGTTTTTCCTTCATTATAGTATTACCTGTATTCGCCAATGGCATAGACACCCAGTCACCATTAGTTGCAAGGCTGGAGCAACGGCGGCTAGTCGGCAAGGAAGTAGACTGGGTGCAGTGCGACGGTGGCTGCGACCAGTGGTTTCACATGCATTGCGTGGGCCTCAACCGAGGCGCTCTCCGGGAAGACGACGACTATGTATGCGGCTCGTGCGCCGACCGCAGGCCTAGGGCTTCAGATCGACATTGA
Protein Sequence
MARHRSDSGNTPSNVNFCLFTELNANKLQFVQRRGPRSGPGQKAKQYAGGGLLRGGKSIEEQALAAEEGRKALGVDTEETRTTNALVKQVATDVDIICEMGKCDENNVQVNMGDSASPMKPDNFSFTVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEACSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKNNGAVGDNKETKIEVKGEQTPEKINGARSRSSSKPPAATPPPARRFKSSEPEAAEGSQSEGAMSGFDEKKTPIKEEPGETRRSPRENKWMSTGGSCGARARVLRSTRLREHRMSNMTVSVTPAPAAAALAPHPDDPLAKYMCHVCGRGDIEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRYCVFSHDELVCKMALDADSLSVTVALAAYRDMRVMLHDERKLRKALLDWGVTEAEREAFELLPDDSRQCQLCKTTCFLSCVTCACTPHVACLRHCRELCACAPTSHKLRYRYTLDELPAMLERLKRKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLKRAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSIHELTLFAAEIDGLACVLPEGSAVKEVLRQTAEFEDRATELLNKDLEDTDAASVRELEEVVELGSRLCIVLPQLSALHARLQQARFLQTVEAHRDDCATLTPEVIDKLLAEGATVVPHRRVEAERAHLYKLKGQVEEWERKARAVLIETTPPRSRESSVEPEEQHTTLAEVEALLAEGDEIEAALPSHHALHTAAAHARDWLAKVEEMQSKELYPYMHSVEALVKRASQIPLALYEKQQLAAALQSAREWKKGAAEMFLKKNWPYTLLEALSPRTECPGAGAGAGARRRGRTADTASLEAVTLLRHFSEDATPTEIVAAFKSAEHRELAAIKELRARNLRKEVRAPPTNGVTFCVCQKRQYGVMSQCELCKDWFHSSCVSNLRERSPRGDTPEPTDQPFPCSEPKFLCPDCVRTRRPRLHRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDAARALLSSPQLATLPQQRLPERKDHTHGSRSSASVEHAYSATPRSPSTRVAPGLLQKLEDLMLEGDLLEVRLEEQSMVWGAVVAARAAEGRRVGRVLDAGRRKRAQRTPRPHHQLKRTRPHHVPTTTKTTMKRGASNTTNYLNRKQAVSSGSGLMMRKHYMARQERRKRGLAATTRGKHPRQSRLEHDSSERDGGAARGQQQHLPFVCGGRRGLRRRRLSPAHWSVLVIHLDESSVPGFSFIIVLPVFANGIDTQSPLVARLEQRRLVGKEVDWVQCDGGCDQWFHMHCVGLNRGALREDDDYVCGSCADRRPRASDRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01438675; iTF_01437748;
80% Identity
-