Msti003513.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Megastigmus stigmatizans
Gene Symbol
pnr
Assembly
GCA_900490015.1
Location
UELV01122393.1:17343-27143[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.00049 2.8 8.5 4.6 1 26 562 587 562 588 0.87
2 2 1.7e-19 9.8e-16 58.0 6.4 1 35 621 654 621 655 0.98

Sequence Information

Coding Sequence
atgaatcTAATATCAATTGAAACGATGAAGGAAAACTTGCTCAAGCAAGAGGTGAAACTGGAGTGGGAGAATCACCGCCCAGAAACAACCTCCCCACGCCAGTTATCCCGTCCCACAATGGAggaacagcagcaacaacagacACCAGTCGATAATCCGCGCAGCGTAATTACGAGCCGACGGCACGTGCGCACCATCACAACGGCCGGACACATCACGGAGACTCTCGCCGAGGTCGAGCCCAGTTCACCGGACAACGGACAGCCCGAGCTACAACATCAACACATTGTCcagcatcagcaacagcagcagcagcatacgACGAGGAACATCAAGCAGGAGATGCAGGAgcagccgccaccgccgccttACGTCGACGAACAGCAGCATCAGTATCACATTCATATGTCGCACGAGCACAGTCCAGAGGATCAGCATAGAGTAGCtgaacaacagcagcaacaacatcAACAGCAGCATGTCATTTATACCACAGCAAATGGTCAGGAGATGCAGGTCGATGCGCAGGAGACTGCCGAGTCGACCATTGCTTTGACTGTCGAGGAGCCGCCAAGGTACGAAACGCCAGCACCGGCTCGCGTCGAGGTTGATCGCGTGACCTACGTGGCGTACGCAGAGGATCCAGAGCTGAGACGGGACGCACACGTGATAGCCGTGCAGGATCACCAGCGCCAGACGATCTCGGTGCAGCAGGGACCAGCCCAGCAGCGATTCAGTCCTCACGAACCGGTGCAGagtcagcaacagcagcagcagcagcagagtcgCTATCAGACCTCGCCCAACGGTACACCGGCAGAAGGTTACGAGGGCCAATCGATGGTCAGCCAAACTGGTGGTGGCGCGATGCATCTAAGTCCTCAAGCTCAGAACTTCTCGCCGCCGTTGGACGTTATCAGGCCTactcaacagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaacagcagcaacagcaacaacaacagcaacatcaacagcaacagcaacagcaacaccTGGTCGCGACGACCTACGCCGATGCCACGATCAAGTGCAGCGCTGATGCCGGTGTCGCCGCTGAGAATCTAAAGGCATCCAGCACCTACACGACTTTGGAGACTGTCCCTCTGCCGCCGACTCAGGCTGTTCCCTACACCCAGTACATAACCGCCTCCGAGGGTTTTCAGCCGGCGCCCACCAGCTACACTTACCCCAAGCACCAGGAGATCTACATATACCCGGCATCTAGTCAAGCTTCCCGAACCGGTGAGGTCGAGCATTCGGCGAGCGTGTACATAAAGAGCGACCCAACACTGACCTCCTCCTCGCTGATGCGTCAATCCTTCCAATACGAGCAGCCACCCTCGCCATCCCAGGTCAACATGTACACGGGCAGCACCGTGACGGCCTACTCGTTCAAGCCAAGCAACGATCAGTATTGGCCAACGACGAGCGGTGCACCTTCGCCACCGGGCTTCGATTATGGCCAGGGTTACGCGGGTGTACCGGCGATAGCGGTGAGCGACGGCAGCGGTATGATCTTCTCGGGTGGACCTTACGTGGCGAACGGGCCAACCTCGCCCTGGACCACTGTCCCATTGGCCAATGCCGAGGAGGCCTTCGACGCCACGTCACTCAACAGCGAGCCCAAGGAGTGCGGAAATTGCGGCGCCAATACAACTACCATCTGGCGCAAGGACGGCCTCTTTCTCAGTCACATATGCGCGATCTGCTGCAAGAACACCGGCATGAGCAGGCCAACGGCTCAGCGCGCCAAGCCCAAGACCTCCGTACCCCCGGCAAATACTGGTGGCAGAAGGTTAGGCGCAAGGTGCGCAAATTGCGGAACCACCACGACGACCCTTTGGCGACGAAACAATAGCGGCGAACCGGTGTGCAACGCTTGCGGACTGTACTACAAACTTCACGGTGTAAATCGACCAATGAGCATGAAGAAGGACGGCATCCAAACGAGAAAAAGAAAGCCCAAAAATCACGGCAGTGTAAATAACAATCATGGAGTGTCGAACGCCATTCACAAACAAGAAATCAAGTCCAGCCTACTCGGTGAGTCTCTGGTGCAGTTGAGCATGTACGCAAATGGAGGTGGGGACGGTGGGGCGGCCGAAGAGCATTACATACCGGCGAGTAGCTCATTGTCGAGCGCGCAATTACCTATGGCATTGCCGTCTTACGGTGCCTCGCACTCGCCCCTAACTTTACCTTCCGCCGGCGCACTGAATCGTCAGACGACAATTACcGTGCCACCGTTAGAACCAGTCACTAGTCGACCAAATGCAGACTTGACATCAGTGATAATGTCGACAACGGCTGCGCACACGACTGAGAAGTCTTAA
Protein Sequence
MNLISIETMKENLLKQEVKLEWENHRPETTSPRQLSRPTMEEQQQQQTPVDNPRSVITSRRHVRTITTAGHITETLAEVEPSSPDNGQPELQHQHIVQHQQQQQQHTTRNIKQEMQEQPPPPPYVDEQQHQYHIHMSHEHSPEDQHRVAEQQQQQHQQQHVIYTTANGQEMQVDAQETAESTIALTVEEPPRYETPAPARVEVDRVTYVAYAEDPELRRDAHVIAVQDHQRQTISVQQGPAQQRFSPHEPVQSQQQQQQQQSRYQTSPNGTPAEGYEGQSMVSQTGGGAMHLSPQAQNFSPPLDVIRPTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQHLVATTYADATIKCSADAGVAAENLKASSTYTTLETVPLPPTQAVPYTQYITASEGFQPAPTSYTYPKHQEIYIYPASSQASRTGEVEHSASVYIKSDPTLTSSSLMRQSFQYEQPPSPSQVNMYTGSTVTAYSFKPSNDQYWPTTSGAPSPPGFDYGQGYAGVPAIAVSDGSGMIFSGGPYVANGPTSPWTTVPLANAEEAFDATSLNSEPKECGNCGANTTTIWRKDGLFLSHICAICCKNTGMSRPTAQRAKPKTSVPPANTGGRRLGARCANCGTTTTTLWRRNNSGEPVCNACGLYYKLHGVNRPMSMKKDGIQTRKRKPKNHGSVNNNHGVSNAIHKQEIKSSLLGESLVQLSMYANGGGDGGAAEEHYIPASSSLSSAQLPMALPSYGASHSPLTLPSAGALNRQTTITVPPLEPVTSRPNADLTSVIMSTTAAHTTEKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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