Basic Information

Insect: Megastigmus stigmatizans
Gene Symbol: Rreb1
Assembly: GCA_900490015.1
Location: UELV01134317.1:19369-27218[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00012 0.016 16.5 0.1 1 23 39 61 39 61 0.97

2 14 0.00069 0.091 14.1 0.1 1 23 76 98 76 98 0.98

3 14 2.3e-06 0.0003 21.9 3.1 1 23 104 127 104 127 0.98

4 14 1 1.4e+02 4.2 1.1 2 23 257 279 256 279 0.93

5 14 3.3 4.4e+02 2.6 0.3 1 19 335 353 335 355 0.93

6 14 0.011 1.5 10.3 0.1 1 23 468 490 468 490 0.97

7 14 1.7e-05 0.0022 19.2 0.4 1 23 499 521 499 521 0.98

8 14 0.00039 0.051 14.9 2.5 1 23 527 550 527 550 0.97

9 14 0.082 11 7.6 1.9 1 23 939 962 939 962 0.95

10 14 0.0045 0.6 11.6 0.1 3 23 1213 1233 1211 1233 0.97

11 14 0.00023 0.03 15.7 2.4 1 23 1239 1262 1239 1262 0.97

12 14 0.0094 1.3 10.6 3.6 1 23 1300 1324 1300 1324 0.97

13 14 0.85 1.1e+02 4.4 1.4 1 23 1517 1540 1517 1540 0.94

14 14 0.32 43 5.7 0.4 8 23 1580 1595 1574 1595 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00012	0.016	16.5	0.1	1	23	39	61	39	61	0.97
2	14	0.00069	0.091	14.1	0.1	1	23	76	98	76	98	0.98
3	14	2.3e-06	0.0003	21.9	3.1	1	23	104	127	104	127	0.98
4	14	1	1.4e+02	4.2	1.1	2	23	257	279	256	279	0.93
5	14	3.3	4.4e+02	2.6	0.3	1	19	335	353	335	355	0.93
6	14	0.011	1.5	10.3	0.1	1	23	468	490	468	490	0.97
7	14	1.7e-05	0.0022	19.2	0.4	1	23	499	521	499	521	0.98
8	14	0.00039	0.051	14.9	2.5	1	23	527	550	527	550	0.97
9	14	0.082	11	7.6	1.9	1	23	939	962	939	962	0.95
10	14	0.0045	0.6	11.6	0.1	3	23	1213	1233	1211	1233	0.97
11	14	0.00023	0.03	15.7	2.4	1	23	1239	1262	1239	1262	0.97
12	14	0.0094	1.3	10.6	3.6	1	23	1300	1324	1300	1324	0.97
13	14	0.85	1.1e+02	4.4	1.4	1	23	1517	1540	1517	1540	0.94
14	14	0.32	43	5.7	0.4	8	23	1580	1595	1574	1595	0.77

Sequence Information

Coding Sequence: ATGGACCCTTCTTCCCTATTGACCGCGGAGACTGCACCTGATCAACGCGACGGCTACAACGAGAGTCAAACGGATGTTGAATCACCACCAACGGTTAATCAGCCGGAAGGTACCCACCCGTGCCCGGTTTGTCTTCTCGTATTTGCTACCTCACGAGAACTGACCAATCACATACGCGGCCACAACTCGCCCCGCAGCGCCACGGACGGAAGTGGCGAAGAAGACTACTCCTGCGGCGTCTGCCGCAAGGTCCTTAGCTCAGCGAGCTCCTTGGATCGCCACGTTCTTGTCCACTCGGGCGAACGTCCCTTCAAGTGCAAACACTGCCAGATGGCATTCACCACCAATGGCAACATGAACAGGCACTTAAGAACCGCTCACAGGACGATCTCACCCGCCAACAGCTGTACTGATTCCGAGGTCAGCAGTGACTTCGAGAAGCTGCGCGACTGCCGTGTCATTGAGGAGGAGTACAATAACAATGAAATCGCCAAGAGGATCTCGCGTGGGTTCATCACCGGGGAGATGAGATCGAGGACACACTCGGAGCCCCCGATGCGCAAACGCAGACGGCTCGACTACGCGGACGAGGCCGACAGCCAGAAAAAACACAAGATACTGCTGAGAAACGCGAAGACCGAGGTACATGGCAGCCACACGGAGTCGAGTCAGATAGCCCACGGCTGCACCTTCTGCGGCCGTCTCGACTTCCCCAACGTCGACCTTCTCGAGTCCCACTTGGTGAGCAGCCACATCGACCAGCCCACCGAGTGCCTCATCTGCCAATTCCCTTGCAAGACCATACAGGAGCTCAATCTCCATCGGCTGTTGAGCCACTTGCACGAGTTGCCGATCGCCTTCCACGGCAAGAACACCCGCAAGTCCGTGATTGGCTTCAATGACCTAACCTTCACCGACTTCACCTCCAAGAAGTTCACGATGATCGCCAGGGCCGCTTGCGAGGAGTCCCTGCATCGGCACACCTCCGACGAGACGTCCAAGTTCCAGTGCTTGAAATGTCTGCGAGCCTTTCCCTGCCTATCGGCCCTCGAGGCACACGAGACGGATTGTGGCCTACTGCCGATCGTCAATCACTGTACGACCGACCAGCAATCCGACAGGGAGTACTTCTTCGCCGGCCTCAATCTGCAGAACAAGGCCGCTCTGGCCGAGGCCAAGGAGGGCAAGGATCTTGCCGACATCTCCAGCATACTGTCATTGACGTCTGGCCCGATAATGCAGGGAATGTCCAGATCGGACGCCAGCACCCCGGACAATTGCAAGATCAAGCAGAGCTTCGGCTCATCCGGATCCTCCGGCACTCCCTCGTCCGAGTATCACGAAGATGAGACTCAGGACGTCTTCGCGGCCGAGTTCAGAAAGATGAAACTGAAGGGCGAGTTCCCCTGCAGGCTGTGCAATGCTGTATTCCCGAATTTACGCGCGCTCAAGGGCCACAATCGGGTGCACACGAACGTCGCACCCGGTATGCCGTATCCCTGCAACATGTGCCCGTACAGTAGTACGGACAAGGCTACCCTGATGAGACACTTGCGCTCGCACAACGGCGACAGACCCTACGAGTGCTCGATCTGCAATTATGCATTCACCACCAAGGCCAATTGCGAGAGACACGTGCGCAATAGGCACGGCAAATTGTCTAGGGAGGAGATCAAAACTGTATTGATCTATCATCCGAATGAGGACTCGACGAACGACAGTCTCGAGCATACCTCGCCTCGTGGACTGATGCGGGAGGAGATTCGCAAGTCCATTGTCTATCCGAACAAGCGCGACGATCTTACACCGCAGCACATGCACTATCCAGGTGAGATCAGGCTCAAGGACGAGTCCAAGCTTCGTCATCCCGGATATTCGGTCTCGCACATATTCTCGGATCCGCCTAGGATGCAGCCCATAGCATTGATCAAATCTCAACGGAACATGAATCACGTCAATGACGATCTCGATTCTAAGTCCTCGGAAGACAGTGTATCTCTGGTCATCAGTGAAACCAAAGTAGAGCTACACCAAAGAATTGAAGATAGCTCGATGGATCTGCAGCAATCGAGCGCCAACGAATTGTCGCGCGTGCAAAGTGCAGGCGACGAGAACGCGCCATTGGACCTAACAATGTACGTGTTAGACCTGAGCAAGAAGACAGCACCTGTAGCCACTGTAGCTAACgcagccgccaccgccgccgccgccgccaccgctgccgccgccaccgccgccgccgccgccgccactccAGCAAATGAAAATAGGACCAGACACTGGAATGGCAACACCGTCAATCTCAATGGTAACAATCAAAATTTTTACGCCGCTAATCAAATGCTGCTGACGCAGGCGCTTCTGAGTTCTGGCCAAGTTAACGCTCAGTCGTTACCGATGCAGGCATTCTACGCCAAGGCCATACTTTACCAAAATTTGGCATCGCTCTCTACGTCTAGTGTGCTCCAACCGTATGTTCCATCCGTGTTGCCTCCCCTATACAATCAAACTTACGCAATAACAAACAAGCAGCAGAACGAATTGGTACGCGGTCTTCAAACCAGCGGAGGAAGTCTTGTGGAGCCTTCTGCTCCAGGCTACGGTACTAGCTTTCTCCAGGCCAGAAATCCTGTGGCAAGCAATACCGTCAGCGATCAAAAAGCTGCTCCCGTGCCTTCGGAGCTCGTGCGCAAAAGCATATCCCCGCGGAATAAAGTGCAGAACTCGCGGTCCTCCAGTTCCGTAAAGATGGTCCTTAAGAACGGGGTGCTAATGCCGAAACAAAAGCAACGACGCTACAGAACCGAGCGACCCTTTTCCTGCCCGCTATGCTTAGCGAAGTTCACACTTCGAAGCAATATGGACAGGCATGTCAAGCATCAGCACCCCAAGACCTGGAATGAGCGAGCAAGAGGTGCCCGCTCGAACAGAGGCAGACCACCTACCAATCCAGTACCATTGCTAAAAAATCTAACACAACCAGCAAATCGCGTATCCTTCAATTATCGTCAGTCCTATTCGAATATCCCCCCTGAGCACAATCAGCCATCTACTTCGGGTTATAACAACCATCCCATTTCTGATCATGTCAAATCTGCAATTTTAGCACAACAACTGAAAGGTGGCAACAAACAGCAAGAAGCCGAAAGCGACAAGGAGGCTAGGAAACCCGCAGCTAGAGAGCCGACTAAGAGGACGCCGAGTCTTTTGAGAGGCAAGTTGGAGGCTCACATCGTATGTAAAACAACTGAAAACGTTCGTAAAGAGGACAGTTCAATAGAAGAATTGAAAAAGCAACAGGAACAGCAAAAAAACGTAAAACAGGAATCAAAGTCCCACGACGAGACTAATCAAAACAAAGATGATGCTGGCGATTCCAATAAGGAAGAAAAGCCCTTCAAACCGAAAGAGACTGTTATCAAAATAGAATTTCAGGAAGAAAATAATCAAACCGAAGATTCGGCTAGTGTGCCAGAAACAGTGGACAATACCGCGCAAAACGATCAACAATGTCAATCACAGTGTGACTGCAACGTATCGGGTAGCGACGAAAAGTCGGACGACTCTTCCTCTTCCGAACAAAAGCAGTTAACGAAAACGATGTCCGCCTACTCGATGGCTCCGAACCGTGTCATTTGTCCATTCTGTAAACGTCCCTTCCCTTGGGAATCTTCACTCAAGCGACATGTACTAACTCACACGGGCCAAAAACCGTTCCAGTGCATGCACTGCGCCTTACCGTTTACTACAAAGAGCAACCTTGACCGTCACCTCCTGAGGAAGCACAAAGACCTCGTGGGCCAACCAACAGGAACACAAAGTATCTCATCACCCGAGCCACAAGAAGTACCCAATAATAATAGTCAATTCGCTATGAGAAACGTGCCCGAGAGGCCCTTTAAATGCCACCAGTGCCCAAGCTCGACCTTTTCAACGTTGggcaatttaaaaaaacaccAATCGATGAAACATTGCTCCGACGAGTCGAGGTCCGTCTCACCACCGAGTGTTCCGCAAAACAGTCCCCAACCGGAGGAGGAGAGTCCTCAAGACTACTCCCAGGAATGTCCACAAGAGAACGTACAAGATTGCTCACATGAGGACTCACCGCAAGAGGACCCTCAGCATTACCACCAAGATTCTGATAAGCAACAAAACCAAAGTGGATACGATAGCCAATCTTCGGGCGTTTCAGATAATATGGATAGCGCGAATTCGGCCTCAATAGAGCTAGCAAGGAGATCAAACGATAACAACAATCCAAGCACATCGAATGATGGCAACCATCCAAGCACATCAAACTATGACAACCATCCAAGCACGTCTGGTTATGATAAGAATCCAAGCTCGTCGAGCAATGTCAACAATCCAGGCTCGTCGAACGATCCAAGCCCATCGGGTTATGGTAACAATCCAAGCACATCGGGTTATGGCAATAATCCAAGTTCATCGAGCGACAGCAACACTCCAGGCCCGTCGAACAACGGTAATTCCAGGTCGAGAAAACGGTCACCCAGGTCACTACCAAGACCTGGCACCAAAGCTAGCTTCAGGTGCTACCTATGCCATGCAAATTTCTCCGAGAGGCAGGATAACCTCGATCACGTCAGAGACGACCACCCAGATGACTGGGCGAACCTGATGGAGAGGGACGCTCTAAATCAAAATGATGCTGAGTCCGGCGAGAGGAGAGGTCCCGACTACGTCCACAGAAAGATGATCTGTGCTTTTTGCATGAACCGTTTTTGGTCAGCCGAGGACCTGCGCCGTCACATGCGCAGCCATACCGGCGAGCGTCCCTTCACCTGTACCGTTTGCTGCCAGTGCTTCACACTGAAGCACAGTATGGTGCGCCACCACAAGGGGCACACTATGCCGAGCGACCATAAGAAGCACAAGTCCGTAAAGTCGGCCATGTTCGTGGGCATGGGCGGCAACGAGGGCAACGCCTCCATGATTCAGCAGCCCGCGATAACGCCCAGGTCACAGGATCAGCCTTCCACCAGCAGGGCCGCCGACATTCAAGAGCGGGCCTCGCTGCCCCAAGTGGCCAGAGTGGCGACCGGTGACGCCGCACCCAGTGGATTGATGAGATTCAATCCCTACGACGACATGGCATCGATGACCGGTGCTCGGAGCGAAAACAACGCCAGCGAAAACAACACCAGCGACAACTACAACAACATCGACAACGATGACAACAACAGCGATCTGATCTCAAACCTGTTGGGCATCGATGATAGTGCGATTGTCGATCATATGCTTGAATCGTCGGTAGACGACGCCGCCAAAATCTTGGGAGTCAATCAGAGACCAGAAGGGGACTTTTCGGAGCAATAG
Protein Sequence: MDPSSLLTAETAPDQRDGYNESQTDVESPPTVNQPEGTHPCPVCLLVFATSRELTNHIRGHNSPRSATDGSGEEDYSCGVCRKVLSSASSLDRHVLVHSGERPFKCKHCQMAFTTNGNMNRHLRTAHRTISPANSCTDSEVSSDFEKLRDCRVIEEEYNNNEIAKRISRGFITGEMRSRTHSEPPMRKRRRLDYADEADSQKKHKILLRNAKTEVHGSHTESSQIAHGCTFCGRLDFPNVDLLESHLVSSHIDQPTECLICQFPCKTIQELNLHRLLSHLHELPIAFHGKNTRKSVIGFNDLTFTDFTSKKFTMIARAACEESLHRHTSDETSKFQCLKCLRAFPCLSALEAHETDCGLLPIVNHCTTDQQSDREYFFAGLNLQNKAALAEAKEGKDLADISSILSLTSGPIMQGMSRSDASTPDNCKIKQSFGSSGSSGTPSSEYHEDETQDVFAAEFRKMKLKGEFPCRLCNAVFPNLRALKGHNRVHTNVAPGMPYPCNMCPYSSTDKATLMRHLRSHNGDRPYECSICNYAFTTKANCERHVRNRHGKLSREEIKTVLIYHPNEDSTNDSLEHTSPRGLMREEIRKSIVYPNKRDDLTPQHMHYPGEIRLKDESKLRHPGYSVSHIFSDPPRMQPIALIKSQRNMNHVNDDLDSKSSEDSVSLVISETKVELHQRIEDSSMDLQQSSANELSRVQSAGDENAPLDLTMYVLDLSKKTAPVATVANAAATAAAAATAAAATAAAAAATPANENRTRHWNGNTVNLNGNNQNFYAANQMLLTQALLSSGQVNAQSLPMQAFYAKAILYQNLASLSTSSVLQPYVPSVLPPLYNQTYAITNKQQNELVRGLQTSGGSLVEPSAPGYGTSFLQARNPVASNTVSDQKAAPVPSELVRKSISPRNKVQNSRSSSSVKMVLKNGVLMPKQKQRRYRTERPFSCPLCLAKFTLRSNMDRHVKHQHPKTWNERARGARSNRGRPPTNPVPLLKNLTQPANRVSFNYRQSYSNIPPEHNQPSTSGYNNHPISDHVKSAILAQQLKGGNKQQEAESDKEARKPAAREPTKRTPSLLRGKLEAHIVCKTTENVRKEDSSIEELKKQQEQQKNVKQESKSHDETNQNKDDAGDSNKEEKPFKPKETVIKIEFQEENNQTEDSASVPETVDNTAQNDQQCQSQCDCNVSGSDEKSDDSSSSEQKQLTKTMSAYSMAPNRVICPFCKRPFPWESSLKRHVLTHTGQKPFQCMHCALPFTTKSNLDRHLLRKHKDLVGQPTGTQSISSPEPQEVPNNNSQFAMRNVPERPFKCHQCPSSTFSTLGNLKKHQSMKHCSDESRSVSPPSVPQNSPQPEEESPQDYSQECPQENVQDCSHEDSPQEDPQHYHQDSDKQQNQSGYDSQSSGVSDNMDSANSASIELARRSNDNNNPSTSNDGNHPSTSNYDNHPSTSGYDKNPSSSSNVNNPGSSNDPSPSGYGNNPSTSGYGNNPSSSSDSNTPGPSNNGNSRSRKRSPRSLPRPGTKASFRCYLCHANFSERQDNLDHVRDDHPDDWANLMERDALNQNDAESGERRGPDYVHRKMICAFCMNRFWSAEDLRRHMRSHTGERPFTCTVCCQCFTLKHSMVRHHKGHTMPSDHKKHKSVKSAMFVGMGGNEGNASMIQQPAITPRSQDQPSTSRAADIQERASLPQVARVATGDAAPSGLMRFNPYDDMASMTGARSENNASENNTSDNYNNIDNDDNNSDLISNLLGIDDSAIVDHMLESSVDDAAKILGVNQRPEGDFSEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -