Basic Information

Insect: Megastigmus stigmatizans
Gene Symbol: -
Assembly: GCA_900490015.1
Location: UELV01092721.1:6762-8846[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0035 0.46 11.9 1.3 1 23 288 311 288 311 0.96

2 10 6.9e-06 0.00091 20.4 0.5 1 23 317 339 317 339 0.99

3 10 1.3e-07 1.7e-05 25.9 0.3 1 23 345 367 345 367 0.99

4 10 0.15 20 6.8 0.4 1 23 373 395 373 395 0.98

5 10 5.9e-06 0.00078 20.7 0.2 1 20 401 420 401 421 0.96

6 10 0.033 4.4 8.9 2.4 1 23 430 450 430 450 0.94

7 10 1.4e-06 0.00019 22.6 0.5 3 23 458 478 457 478 0.98

8 10 0.00014 0.019 16.3 1.4 1 23 484 506 484 506 0.98

9 10 0.0028 0.37 12.2 2.6 1 21 512 532 512 535 0.96

10 10 0.19 25 6.5 2.1 1 20 541 560 541 562 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0035	0.46	11.9	1.3	1	23	288	311	288	311	0.96
2	10	6.9e-06	0.00091	20.4	0.5	1	23	317	339	317	339	0.99
3	10	1.3e-07	1.7e-05	25.9	0.3	1	23	345	367	345	367	0.99
4	10	0.15	20	6.8	0.4	1	23	373	395	373	395	0.98
5	10	5.9e-06	0.00078	20.7	0.2	1	20	401	420	401	421	0.96
6	10	0.033	4.4	8.9	2.4	1	23	430	450	430	450	0.94
7	10	1.4e-06	0.00019	22.6	0.5	3	23	458	478	457	478	0.98
8	10	0.00014	0.019	16.3	1.4	1	23	484	506	484	506	0.98
9	10	0.0028	0.37	12.2	2.6	1	21	512	532	512	535	0.96
10	10	0.19	25	6.5	2.1	1	20	541	560	541	562	0.93

Sequence Information

Coding Sequence: ATGACCAACACGCAGGAGACGATTTTGGAGTCAGCGGTGGATCAGCCGCAAGAAGAGATCCAACTTACGGAGTTGAAACCGGTCGAACAGTCGCGGATAGACGTGACCGTTGATGATAGGGATGTCAACATTACAGATGGTCTCAGAGCCCTTAGAAGTTTCTCCCACAGACAGGTTGACGAATTCGATCAGTTCGGATCCGGTTACCCAAGAAAGAGGAAAGCCGAGAGGTGGAAGCATCTGGATGAGGTCCACGAATTCGAACTGGATGGCGAAGTGAAGAACTGCATGAAGAAGATAAATAGCATCGAATCTAGTAAAAATGACAGTAAGAATACTAGTTCGGTTGATCAACTTCACAGCGACGAATTTGAGATGGATGAGGAAGAGGATTTTTACGGTGTCAATGGGGATTTTGAGTATATGGAAGAGAGGAACGATGATGAGATCTATGTGTATCGTCAGCTAGACTCTTGTTCTAGTCCGGAGGTTGATAATGGAGTCCAGAGTATCGAGGAACAGGAGAAACTAATCGTAATCCAGGAGAAAATTGAAGAGCCACCCaaagttgaaaagaaaaaagttgaaaagCCCGTGGCACCTCGACCAAGAGGTAGACctagaaagaaaaaattcaacagaaagaaaaaaactgaaGTGGATAAGAAAGCCACAGAGCCAGAGCCCACGCCGGAATCGCCAGTTCACTCAGAAGAGGAGCTCCAGAGTAAGATAAACGATATAATACAAGCGAACTACCTAATGGAGCAAGAAAACAACAACATCGTAGAGGAGGCACACACCAAGATCCAGGGGGACAAGTCTCATAAGGACAAAAGCACCGAAGAGCAACCAAAGAAATATTGCTGTGTTATGTGTAAGGCGAGATTTAAGGGTAGCGGTGGCCTGCGCAATCACTACAAAGTGGTTCATGCTACCGGTCCCTTATTCAAGTGCGACGAGTGCGGCAAAGAATTCCCCTTGAAGGAGCGTCTCAAGCTTCACGTCCGCACCCATACAGGCTTTAAGCCTTACAAGTGCCCCGAGTGCGATAAAAGCTTCGCCAGGGGTGGCCAACTGGTCCAGCATCGACGCACTCACAGTCAGGTCAAACCTTATAGCTGTGATCTTTGCGCCGGTACCTTCACTTGCGCTGCAAATCTGGCCCTGCACGTGAAACGTCACAATGGCCAGAAAGATCACAAGTGCGATATCTGTGGCAGAGGATTTGTTCGCCGAGACGCTCTGAAGAAACACTTGGAGTGCCTGCACAGGGACGTCAAGTCTTTCCTCTGTGTCATCTGCAACAAGACCTTCAAGGGACACTTGCCGCAACATATGCGAACCCATGTACAAGACAGGCCACACGGTTGCGCCACTTGCGGTCAGCGCTTCGCTCAAAAGAGTCAGTTAACGGTCCACCAGAGAACCCATTCTGGTCAAAGGCCTTTCAGATGTCTCGTCTGCTGGCAGGCTTTCGCACATTCCACAGCCCTGAAGCTGCACACCAGGAGGCACACTGGGGAACGACCCTTCAAGTGCGCCGAGTGTAACGCCGGTTTCACGCAGCTTCCACATTGGAAAAAGCATATGAAATGTATCCATGGCAGGAGCGAGCCGTACTGCTGTCGCAAATGCAATAACTTCTTCAGAATCAAGAATGATCTCGAAGCCCATGAGAAGGACTGTACGGCTGAGGCCAAGTACGAAACAACCGGTTCAGATCCGGGAAACTCTAGAGACGGAACTGAGGGGATGTCGGCCAGTGCACTAGCTAGATACAGAAACATGTCGATAGAGAAGATGAGACTGCTCCTCGCTGTACTACTTAAAAGGATCTCAAAGCCCGAGAGACTGGATGAATTGGGATTCGGCAAGAGGCTCATCGACGAGGTCTTGGTTGACTCATTGATCGCTGCTGGCAAGGAGGCAGTCAAAGCCAATGGAGAGACGCCGGAGTTCGAGGCATTGAGGAAGAATTTAGCAGTATTCTTAGAGTGGACGGTACCCAAAGAGCATTGGGAGAACTTCCGGAAGATGAAGAAGACGCCGGAAGAAGTGCTCGAGACCCTCACTGCCACGTAA
Protein Sequence: MTNTQETILESAVDQPQEEIQLTELKPVEQSRIDVTVDDRDVNITDGLRALRSFSHRQVDEFDQFGSGYPRKRKAERWKHLDEVHEFELDGEVKNCMKKINSIESSKNDSKNTSSVDQLHSDEFEMDEEEDFYGVNGDFEYMEERNDDEIYVYRQLDSCSSPEVDNGVQSIEEQEKLIVIQEKIEEPPKVEKKKVEKPVAPRPRGRPRKKKFNRKKKTEVDKKATEPEPTPESPVHSEEELQSKINDIIQANYLMEQENNNIVEEAHTKIQGDKSHKDKSTEEQPKKYCCVMCKARFKGSGGLRNHYKVVHATGPLFKCDECGKEFPLKERLKLHVRTHTGFKPYKCPECDKSFARGGQLVQHRRTHSQVKPYSCDLCAGTFTCAANLALHVKRHNGQKDHKCDICGRGFVRRDALKKHLECLHRDVKSFLCVICNKTFKGHLPQHMRTHVQDRPHGCATCGQRFAQKSQLTVHQRTHSGQRPFRCLVCWQAFAHSTALKLHTRRHTGERPFKCAECNAGFTQLPHWKKHMKCIHGRSEPYCCRKCNNFFRIKNDLEAHEKDCTAEAKYETTGSDPGNSRDGTEGMSASALARYRNMSIEKMRLLLAVLLKRISKPERLDELGFGKRLIDEVLVDSLIAAGKEAVKANGETPEFEALRKNLAVFLEWTVPKEHWENFRKMKKTPEEVLETLTAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00969040;
90% Identity: iTF_00969040;
80% Identity: -