Msti001070.1
Basic Information
- Insect
- Megastigmus stigmatizans
- Gene Symbol
- -
- Assembly
- GCA_900490015.1
- Location
- UELV01164769.1:1-10478[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 7.9e-06 0.001 20.3 1.0 1 23 174 196 174 196 0.98 2 31 0.0034 0.45 12.0 1.9 1 23 219 242 219 242 0.96 3 31 0.00017 0.022 16.1 0.5 2 23 249 271 248 271 0.96 4 31 0.0025 0.33 12.4 5.0 1 23 291 314 291 314 0.97 5 31 0.003 0.4 12.1 0.0 2 23 421 442 420 442 0.97 6 31 0.05 6.7 8.3 0.1 1 23 448 471 448 471 0.95 7 31 0.00015 0.02 16.2 0.1 1 23 540 563 540 563 0.96 8 31 0.01 1.3 10.5 0.4 1 23 569 592 569 592 0.96 9 31 0.15 20 6.8 1.5 1 23 605 627 605 627 0.97 10 31 4.5e-05 0.0059 17.9 0.9 3 23 671 692 670 692 0.96 11 31 0.31 42 5.8 0.8 2 23 753 776 752 776 0.94 12 31 3.9 5.2e+02 2.3 0.0 2 23 785 807 785 807 0.84 13 31 0.25 33 6.1 0.1 2 23 814 836 813 836 0.93 14 31 1.6e-05 0.0022 19.3 1.2 1 23 844 866 844 866 0.98 15 31 7.1 9.5e+02 1.5 1.5 2 23 917 940 916 940 0.91 16 31 0.00026 0.035 15.5 3.3 1 23 943 966 943 966 0.97 17 31 0.0044 0.58 11.6 0.4 2 23 973 995 972 995 0.95 18 31 0.00089 0.12 13.8 4.8 1 21 1035 1055 1035 1056 0.94 19 31 0.0034 0.45 12.0 1.8 2 23 1070 1091 1069 1092 0.93 20 31 1 1.3e+02 4.2 2.6 1 23 1095 1117 1095 1118 0.95 21 31 0.031 4.1 9.0 0.8 2 23 1125 1148 1124 1148 0.91 22 31 1.2 1.6e+02 3.9 0.2 2 23 1156 1178 1156 1178 0.95 23 31 4.6 6.1e+02 2.1 0.0 2 23 1185 1207 1184 1207 0.87 24 31 0.28 38 5.9 2.7 2 23 1216 1238 1216 1238 0.96 25 31 0.021 2.8 9.5 0.9 2 23 1244 1266 1244 1266 0.93 26 31 0.043 5.8 8.5 0.1 1 23 1334 1357 1334 1357 0.96 27 31 0.038 5.1 8.7 2.0 1 20 1386 1405 1386 1407 0.91 28 31 0.4 53 5.4 1.9 2 23 1503 1525 1502 1525 0.94 29 31 0.6 80 4.9 0.5 2 23 1532 1554 1531 1554 0.95 30 31 0.21 28 6.3 1.8 1 23 1565 1587 1565 1587 0.97 31 31 3.2 4.3e+02 2.6 0.8 1 20 1594 1613 1594 1614 0.92
Sequence Information
- Coding Sequence
- ATAGCGGAAGATGACCGGCTGCCGAAATGCCTCTGCTACAGATGCATGTACAATCTGGAGAATTTTTACGACTTCAGGACGGCCTGCGTCAATGCGGTCGCGCTACTCGAAAGATGTTTGCCACCGGAAGAGCAGAAGATGGAAATCAAGCAGGAGAGCGAGGAGGTGGAGCCTTACTCGGAGCTGCGCATGGAGCTGCTCAAGGAGAAGGAGAACATGCCTATGCTCATACCCGAGGCTCCTGTAGTCAATCCAAACGCTGCACTCGGCACACCGCCTAGACTCACCTCCGATGGTGAGCACGAGCTCGAGGACCTAGGCCACGAGCCAAATGCCGCCGATGAACAAGATCACGACAAATCGGATGAGTACGAGATGGACATGGAGACGAATCCCTCGGATTTCCTGGAGATGAGCGCCGTGGTGCCGGAGGAGGAGAACATCCTGCCACAGCCGGTCCATCATCATCAACAACAGGACACCAAAGTATTTCAGCACCGCAACGAGCAGCACGAGGTCTACGTCTGTTCGCTCTGCAACAAAGCATTCAGCTCGAAGGGCCATCTGTCGCTTCACGCGAGGATACACGTAGGCGCCGGGGACGTGATAGGCGAGAAGGTCATCACGGACGATCACACCTCGTACAAGAGGCCCTACCAGTGCGATCTCTGCAACAAGTCCTATTCCACCGCCAAGCATCGATGGGGTCACGTCTCCACGACGCATCGAGGCCATCCAGCTGTGACGTGCGGCTACTGCTCGCGCATCTACTCGACGCGCACGAATCTCGAGGAGCACATTAAGTCACGACACGCCGGTCTACCGCCACCGCCCGATGCCCCCATGTCCTACGTGCAGCCAGACTCGCGGCATCAGTGCAAGACCTGTCCCAAGATGTACACCAACATTACCGATCTCAACAAGCACAGCAGAATCTGCCATGGCGAGAATCGCAAAGAGTCGGCGGCCAATAGTTACGGCGCCAATTTCAACAAGAAAGGCGCGACCTcTAAGCTTAAAAATGCTTTGGATCCAACTTCAGACTTATCGAGTATTGACTCAGATTatgaaaataaagattataagaGTGCTGAAGCAAAACTTGCCAAAAATCCTCAGTTAACCATTCTTAAGCAGGCTCTGATTAAGGGCGAGAGTGTAAAGAAGGAATACGAAGAAAGGCAGAAAATGTTGAGCAAAGCAAAGAAACAAGCCAATGCAGTTAATAAAGATTTGACTGATCCAGATCCCAAGAGATGGTACTGCGAAGTCTGTCCCGTTAACTTCGCGAGCGTCGACGAATTGAGGCAACACGAAAAGACTCACGACGCCGACAAGCCTTACATATGCGTTTTATGCGAGAATGACTTTGTTCTTAAGTCATCCTTGAGCAGGCACATACTCTTGTCTCACGGTGTCGATCCGACGCCTCTTGTCGAGAGTGACCAATGTCTGAAGAAATCGTTGCAGGTTGCGAGTATGCAGCCCCTCGTAATAAAGGAGGAACAGATCGTTACCAAAGAAAATTCCATATCGCCATTTTCTGCTGATAATTTGGAGAATGACGATGCCGAACATGAGAACGGGACCGAGAACATTCTCGAAATGGAAACTGTTTTTGTGTGTGAAATCTGTACGCGTGACTTCAACGATAGAGCGTCACTATGGTTACACATTCGAGCTACTCACAAAGAATACGCAGCGTTCGCCTGCGGAGTTTGTCTGAAAATTTGTTCGGATAATGCACAATTATTAAATCACGTTAATATGTATCACGGAGGCTCAAAACTTTTGATGTCCGAGCAAAGAAGGTATAGCTGCACAATATGTGGTAGGCAGCATGACTCACGGAAGAAACTCATAACGCACGTGTCAATTCACAACGTCGATCTGAGCTACGATCCGGCGAATTTCGTACAATTAAACACTAACTACTATAATGAGAATGTGAACAGTAACGAGGGAAACGAACTCATTATGGACTGCGACGATGACAGCGAAAAGGTAGACTGTTACATTTGCTACAAATCATTCCCCAACGAAGATCATCTAATACGCCATCAGCGAAATGCTCATAAATCGGAGCAAACCGTTCAAGTGGGTGAATACGCGGGTGGATCGCCCGGACAGAACGGTACCGGCAATCGTGCTCAGTATCATCTTTTCTTCGTCTGTGAGCTTTGCGGCAGTTCACATCCCAGTAAATGGGAACGATGGCTCCATGTCAGCAGTACACACAGCAATGAACCTTCTATCAAGTGCGAGCGTGACGACTGCGCCAAGATCTTTGCGACGAAGAGTTTGCGTAACGAACATGCACAACATCATCAGATGCAGGGCAGCTCGCCAAACACCTGCGAAATCTGTGGCAAACTGTGGGGCAGTCGCGTCGACTATTGGAAGCACGTGATGGGTGTGCACTCGGACACGGTGCCCCTTATTTGTGGAGTGTGTCTGAAGGTGTTCCCGGACGTGTTGCAACTCAGTCAACACGTCAAACTGAAACATTGGCCGCTGACAAATGGAGACTTTAGCTGTGACATATGTGGCAGGCCATACTCGAACAAGAGTAAAATGTCGAGGCACAGGAAGATACACGGACTGGATGGCGAGGCTTACAATCCTGCCGCTAACAACAGTAGCCTCATTATGAGTGATGCGTCTATGCACGACATGACCGGTCTGCCCATGCCCCTTCAATTAGATAATGGACTTCCTCAACCAATCGAACCACCCTCGCAAGATTTGAGTTGTGAAATATGTGGCGATCTCAAGTTCCCCTGCCTCGAGGATCTCTGCAATCATCGACGCATGGCTCATAGTCTCTTCCCTTGCGATCTCTGCAACAAGTGTTACGGGCGAACCTCGCATCTATGGAAGCACGTCAATCGAGTGCACAAGGGTCACGAAGACGTCACCTGTCGCTATTGTCTCAAAACGAGTGCCTCGAAAGATCATCTGGCCGCTCATATCGCTAAAATACACAGATACGAGCCAGAAGTAAAGAACGAATTCAGGGACATGATGAGCTACAAGAGCATCGCTTACaatgcggctgctgctgctgcggccgctgccgctgccgccgagGAGGATGTGCTGCACTTCTGCGAGAAGTGTAATAAGTCGTTCCACAAAAGGTACCTGCTGCGTCGTCATATGAAGGGCTGCCAGAACTATCGTAAGGACCCGGGTGCCCTGTTGACGCGTTGTCGCGCCTGCGAGCGCATCTTTAAGGATCGCGCGAGTCTGCAAAAACATATCGAGAATCATCACAGCTCGTACGAGTGTCACCTCTGCAAAGAAACCATTACCTCGAAACTTGGCATAATGACGCACAATAGGGTACATCACATGCGACATCCCGATCTCACTTGCGAGCTCGAAAGTTGCCGAAAATTGTTCAGGACAAAGGAGGACCTCGAGTCTCATCGTAAGGATCACAAGCATCACGGCAGTCCAAACGTGTGCGATTTTTGCGGCGACACAGTGGAGAACAAGCTCAAACTCAAGATGCACATACTCAGCCTGCACAGAAACGAGATTGGCGTCTCGTGCGGTGTCTGTCTGATACCTATGAAGGATCCTAAAGATTTGAAAAAGCACGTCGAGGACGTGCACGAGCACATACTGAATAAGCCAAATACTTGTCAGGTGTGCGGTAAGCAGTACGCCTCCAAATGGAAAGCCTTCGACCACACGAAAAAGTGCCACGGCAAGGTGTTCCGCACCTGCAAGCAGTGCCTCGCCGTATTCACGTCCAATGAAGATTTACGTGACCACTACGAGCACATTCACAACATCCCCAAAGATCAGCTGGATGCATTCCAGTATCGTCTCGAAGTTGCGGGCAATAAAATGGACGATTATGATTTGGGACCGCTTGAGGTAGTAGTCAAGGAAGAGCCCGAGGAGCTCGATTTTGACGTTGAGCCCTTTGCCGACGAAGACAACTGCAACTCGAACGACTCGAAACGTCGACGCTCGATGACCGACACCTTCGATTGCGAAATCTGTCCCGAGATGTTCCTCAACGAGGAGCTGCTCTCCTCCCATTACCGCAACGTCCACAATACCGATCCCTCGCGCATGTTCAAGAAGGTCAAGCTCGATCTGTCCAGCAAGGCAAAAAAGAAGATGCGCGAGCGCGAGAATTACGAGTGCAAGAATTGCCAGAAACAGTTCTGCACCAAGACCTTGTACCTCGGCCACGTGAGCGTCTGCACGCGCAAAAGTGCACCCGCGGCCATGATGATGCCTGCCACGTCGATTCTGGAGGCCCACTTGAAGAACAACAATCAGATAAAGCGCGAGGAACCGGAGCCCATACTTTGCGAAACCAATCTCAACATACCGGACTTCAATCTGTTCGAGGACATCAATATGCAGCTGTCGGGTCAGAAACCGGTGCCAAATCTCATGCCCATGGCCCACTCCTCCAAGTCATCCAAGTACTCGCGCAAGGACTCGCGCAAAGTCTACGACGAGTCGACCAACACCGAGTGCACCTGCGAGGTCTGCGGCAAACAGTGGCCAGCCAAGAAGCACCTCTGGCAGCATCTCATCAGATTCCACAGAGCCGAGGCTGCCGTCACTTGCGGCGTCTGCCTGAAGCTTTGTGCCAACTACGACGATCTGTCGGAGCATCTGAAGAACCTTCACCCCTCGATCCTCTCGACGGCTGGTAACAATTTCACTTGCAAGATCTGCGGTAGGTACCACAATGCCCGCAGCAAACTGCTGCTGCACATGAGCATACACATCGACTGCAAGAACAACTTTATGTGCCAGCGGTGCAACTGTAGCTTCTTGAACGAGGAGAAACTGAACGAGCACGTCGCGGCGTGTATCGGTCCTCACGAGGAATCGGAGAACCAGATGCTCAGTGTGAAAGAGGAGAACGAGGAGAACGAGGAGAAGGGTAGCTTGATAGGTgacgaggaagaggaggaggaggaagaggaagaggaggaggagcacCCACACGAACGCGAGCAGGAGCACGATAGGAACCAGTATGAGTCCGAGGAGGAGAATTCGGATAGCAGCTCGGACAAATCCAACGACTCGGATAGTAATAGCAGTAGCAATAGCtcgagcgacgacgacgatagCGACGAGGACGAAGACGATGAGGCAAGGTCGAGAAATATCGAAGAGAGTAGCAATAGCAAGGACTCGGACAACATGGACAACATGGAAAACATGCAAGCGCAAAACACCGTGAAGAGGGAAATGATAGAAGAGAACGAAACGATGAGCCTTGGCGAAGAGGATGAGGAGGACGAGGAGAACGAAAACGAGGAAAAAAGTAGGAGGTACGAGCAGATGTCGGAGTCCGAGGACGACGAGTACCAGAAGAAGAATCAGGAGGAGCAACATCAACAGCAGGAGCGCGCGATGGAGGATCGTTACGAGGTGCAGAGGAAGGATCCTATGTTGGTCAATTATTCGGACGATGAAGAACCGCCGGCTTTGAGTCCGATGCTACCGGTCGCCGTGAAGTCTGAACAACATAGCAGCCAGGAAGAGCTGAACAATCGTAGACAGGCGTTAGAAGAGGATTCGCTTGCGGAAAAGAAGGACGAGAGCGAGGAAGAAAGCAGCGATGAGGAGAACGAGGATTCCGATGACGAGGCGGTGCAGCAGGCCGAGGTCGTCGATCCCAATAGTGATTTTCATGCTGATAACAATTCGAGGAGTAGCAATGAAGgatGTGAGGATGAACAACAAGAGGTTGAAGAACAAGAAGTTGAAGAAGAGCAGGAAGAGGCAGAAGAGGAgcaagaagaagaggaggaagaaggagAAGGACACGAAGGACAGGGAGGTGAAATCGGAGAAGGACAAATGCAAGAATGTATAGAAGTAGAGGAACAGGAAGAGCATGAGATACAGGAAGTTGAGGAGGAGGAAGATGACGAGAACCTTGAACATGGCATGAACGAGGGCGAGGTGCTTGAGGTTGACGAAAACGAGATGCACAATCTTAATGGTACTGTCTTAATGCTCGCAAATGATGCTGACGGCAATCAGATCCTCATAGAGCGTAACATGGCTGATCTTGAAAATGACGACTCAGTCCACGACATGGCGCAGTACGTGTTCCAGGACGGCACTGGTTTTGCTCTCGAGGACTACGAGGCCATCGTCGAGAGCCAAGGCGATGAGATCGACGAGGATCAACAGCACCATGGCTTCGAGATGGAAATAGAGAATGCCCAAGAGGAAGAAGAAGTCGAGGAACAAGAAGAGGAGGATGGTAACGGTGTTAGGGAGGAGATaatcgaagaagaagaagtagaggaagtaGAGGCGAACGAAGTAGAAGAGCAGGTAGAAGAGGCGGATGACGATGAACTCAGTTCCAGTGCCAAAAGCTAA
- Protein Sequence
- IAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPEEQKMEIKQESEEVEPYSELRMELLKEKENMPMLIPEAPVVNPNAALGTPPRLTSDGEHELEDLGHEPNAADEQDHDKSDEYEMDMETNPSDFLEMSAVVPEEENILPQPVHHHQQQDTKVFQHRNEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPPPPDAPMSYVQPDSRHQCKTCPKMYTNITDLNKHSRICHGENRKESAANSYGANFNKKGATSKLKNALDPTSDLSSIDSDYENKDYKSAEAKLAKNPQLTILKQALIKGESVKKEYEERQKMLSKAKKQANAVNKDLTDPDPKRWYCEVCPVNFASVDELRQHEKTHDADKPYICVLCENDFVLKSSLSRHILLSHGVDPTPLVESDQCLKKSLQVASMQPLVIKEEQIVTKENSISPFSADNLENDDAEHENGTENILEMETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNVDLSYDPANFVQLNTNYYNENVNSNEGNELIMDCDDDSEKVDCYICYKSFPNEDHLIRHQRNAHKSEQTVQVGEYAGGSPGQNGTGNRAQYHLFFVCELCGSSHPSKWERWLHVSSTHSNEPSIKCERDDCAKIFATKSLRNEHAQHHQMQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVLQLSQHVKLKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEAYNPAANNSSLIMSDASMHDMTGLPMPLQLDNGLPQPIEPPSQDLSCEICGDLKFPCLEDLCNHRRMAHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRYCLKTSASKDHLAAHIAKIHRYEPEVKNEFRDMMSYKSIAYNAAAAAAAAAAAAEEDVLHFCEKCNKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYECHLCKETITSKLGIMTHNRVHHMRHPDLTCELESCRKLFRTKEDLESHRKDHKHHGSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHEHILNKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSNEDLRDHYEHIHNIPKDQLDAFQYRLEVAGNKMDDYDLGPLEVVVKEEPEELDFDVEPFADEDNCNSNDSKRRRSMTDTFDCEICPEMFLNEELLSSHYRNVHNTDPSRMFKKVKLDLSSKAKKKMRERENYECKNCQKQFCTKTLYLGHVSVCTRKSAPAAMMMPATSILEAHLKNNNQIKREEPEPILCETNLNIPDFNLFEDINMQLSGQKPVPNLMPMAHSSKSSKYSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCANYDDLSEHLKNLHPSILSTAGNNFTCKICGRYHNARSKLLLHMSIHIDCKNNFMCQRCNCSFLNEEKLNEHVAACIGPHEESENQMLSVKEENEENEEKGSLIGDEEEEEEEEEEEEEHPHEREQEHDRNQYESEEENSDSSSDKSNDSDSNSSSNSSSDDDDSDEDEDDEARSRNIEESSNSKDSDNMDNMENMQAQNTVKREMIEENETMSLGEEDEEDEENENEEKSRRYEQMSESEDDEYQKKNQEEQHQQQERAMEDRYEVQRKDPMLVNYSDDEEPPALSPMLPVAVKSEQHSSQEELNNRRQALEEDSLAEKKDESEEESSDEENEDSDDEAVQQAEVVDPNSDFHADNNSRSSNEGCEDEQQEVEEQEVEEEQEEAEEEQEEEEEEGEGHEGQGGEIGEGQMQECIEVEEQEEHEIQEVEEEEDDENLEHGMNEGEVLEVDENEMHNLNGTVLMLANDADGNQILIERNMADLENDDSVHDMAQYVFQDGTGFALEDYEAIVESQGDEIDEDQQHHGFEMEIENAQEEEEVEEQEEEDGNGVREEIIEEEEVEEVEANEVEEQVEEADDDELSSSAKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00969016;
- 90% Identity
- iTF_00969016;
- 80% Identity
- -