Msti005641.1
Basic Information
- Insect
- Megastigmus stigmatizans
- Gene Symbol
- ZBTB41_1
- Assembly
- GCA_900490015.1
- Location
- UELV01000435.1:11443-15675[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.0011 0.14 13.6 0.2 2 23 54 75 53 75 0.95 2 21 1.3e-06 0.00017 22.7 1.3 1 23 81 103 81 103 0.99 3 21 3.8e-07 5e-05 24.4 0.5 1 23 109 131 109 131 0.98 4 21 0.015 2 9.9 4.3 3 23 139 160 138 160 0.96 5 21 0.00076 0.1 14.0 1.9 1 23 165 187 165 187 0.98 6 21 1.1e-05 0.0015 19.8 1.0 1 23 196 218 196 218 0.98 7 21 9.3e-06 0.0012 20.0 1.2 1 23 224 246 224 246 0.97 8 21 1.1e-05 0.0015 19.8 0.8 2 23 253 274 252 274 0.97 9 21 4.2e-06 0.00055 21.1 1.6 1 23 280 302 280 302 0.98 10 21 0.41 55 5.4 3.0 3 23 418 439 416 439 0.93 11 21 0.96 1.3e+02 4.2 2.1 1 23 468 492 468 492 0.93 12 21 0.0011 0.15 13.5 8.1 1 23 512 534 512 534 0.98 13 21 0.0027 0.36 12.3 4.8 3 23 541 561 541 561 0.99 14 21 0.0012 0.16 13.4 0.1 1 23 566 588 566 588 0.97 15 21 2.7e-06 0.00036 21.7 1.0 1 23 596 618 596 618 0.98 16 21 0.016 2.2 9.8 2.8 1 23 624 647 624 647 0.93 17 21 0.00025 0.033 15.5 0.3 3 23 660 680 658 680 0.96 18 21 2.3e-05 0.003 18.8 1.4 1 23 686 708 686 708 0.96 19 21 3.7e-08 4.9e-06 27.6 0.2 1 23 714 736 714 736 0.98 20 21 3.5e-07 4.6e-05 24.5 0.7 1 23 742 764 742 764 0.98 21 21 0.00027 0.036 15.4 1.1 1 22 770 791 770 791 0.97
Sequence Information
- Coding Sequence
- atgAAAAGACGCTCTGCTGATCGGAATCCGCTCGGTTTGGACTTCATAAAGGATGAGATATTTGATACTCAGATAGAGCAAAATTCCAATCCATTGGCACTCGCCAGTGACAAAACTGAACCTGTTGGTGATCAACAAACTGTTCATCCTGGTCACCTGCAGTGTCCAGTCTGCTCCAAGCGCTTCAAAGCTAAGAACCTGCTGGAGGGCCACTTGGTGTCTCACAGCGACGCTCGGCCCTACCAGTGCGACATCTGTCAGAAGACCTTCAAGCGCACCAACACCCTGGCAGTCCATCGTCGCATCCATACCCGGGAGCGAAACTACATCTGCGAGGTCTGTGGCCGTAGCTTCGTCCAGGCGACCCAGTTGACCAGCCACCGGCGCCGCCACTTCGACAAATACACGCGCCACTGCAGCATCTGTAACAAGGGATTCTTCACCAATGCCGATCTCCGCTGCCACATGAACGTGAAGCACGCCGCGAAGGAGCACGTCTGCAAGCTCTGCGCCAAGTCCTTTCCCAACGGCCACACGCTGGCGCAACACGCGAGGACTCACGAGCCCGACTATCAGCCCACCAAGTATCAGTGCGAGTATTGCGGCAAGACCTTCGCCTACAGAAATTCCATGGTGACGCACGCCAAGTCGCACACGGGCGAGAACAAGTACGACTGTCATCTGTGCGGTAAGTCCGTCACGTCTAAAGCCTCGTTGCGAGATCATCTGAAACTGCACGGCGACGAAAAGAAGATAGTGTGCGACGTTTGCGGCAAGGCCTTCCACAAGAATTCGACTCTGGTGGTGCACAAGCGCACGCATACAGGCGAGAAACCCTACGTGTGCGAGTCCTGCGGCAAAGCCTTCACCCAGCACTCGACCCTCGTCATACACAGGAGATATCATACGGGACAGAGACCCTATCAGTGTGCCACTTGCAGCAGATTCGTCCGTCCAACTCGTTATCAGTCTGCGTCGGTCATCGATATCGAGGACACGAAAGTGGACGTGTTACTCGAGATGCCGTCGGTTCCGATCCCCGTGATCACCAAAAAGAAGCAGCAGATGCGCAAGCTCGAGAGCGAGCAACAGCTGATCCAACCGAAACTCGAGCCGAGTCACAGCGAGAATATATTGGACGACGATATGCCGTTGGCTTACTACTGCAGGCCCTGCAACACGTTACTCGCCTCGCAGGATCTCCTCGACGCGCACAACTCGACCCAGCACAAGCCGAAGAAGAGGTACGGGTGCGCGCACTGCGATAATAGTTATCATACGACTCGCGGTCTGCGGAAACACCTCGACCAACAGCACAAGAACCcggacgacgacgaggatgaggaggaggaggaggtagagGAGGAGTCGCAGCAGGAGCCGGGCCCGGGAGGCTACTACTACGAATGCGAGCCCTGCGACAAGCTCTACCGCTTCAAGTACAGATATCTGTCTCACCTGAAAACGAGGCAGCACAAGCGAACGAGGTTGGCGCACCGGAAACAGCAGCGCCTCCAAGAGCCGACGAGCTTCTTCGAGTGCGAGACCTGCGGCAAACTGTTCCACCACAAGAGCAACTACCACAAGCACCTGATGAGCCACACGGTCGGCGATCTCGGCTGCAAACACTGTCCCAAACAGTTCAGGCTCTTTCGGGACCTGACGCGCCATGAGAAGACCCACTTCTCGCAGAGCTACAAGTGCACCGAGTGCGACTACGAGACGACTGTACAGGCTGCTCTCAATATACACGCGGCGCGACACACGGACAGGACCGAGCTGCCCTACGAGTGCAACGATTGCTCTAAGAAGTTCCGCAAGCCGACCGAGCTCCAGGAGCATTACAACATACACTCGGGCGACAAGCCCTTCGCGTGTCAGATCTGCTCGACCACCTTCTCCCTGCGCAGACAACTCTCGGCCCACTGCAGGCGACTGCATCCCGAGTTGAAGGCGAAGAAGGTGACCAGTACCGCCTGCGACATATGCGGCAGGGTCCTCGCGACCAAGAGATCCCTATTTAGGCACAAGGAGAGCCACAGTCCCACGAAGCACTACCTCTGTGACTTCTGCGGCAAGGGTCTGAGCAGCGCGGAACATCTTAAGAAGCACAGACGGATACACACGGGCGAGAAGCCCTACGTGTGCGACATCTGCGGAAAGGGATTCACCGACTCGGAGAATCTCAGGATGCATAGGCGCGTCCATACGGGCGAGAAGCCCTACAAGTGCGACCTGTGTCCCAAGGCCTTCAGTCAGAGGTCGACGTTGACGATACACAGGAGGGGCCACACCGGCGAGCGGCCCTACGTTTGCAAGATCTGCCAGAGGGGATTCTCGTGTCAGGGAAACTTGACGGCACATCAAAAGACCACCTGCGTTTAA
- Protein Sequence
- MKRRSADRNPLGLDFIKDEIFDTQIEQNSNPLALASDKTEPVGDQQTVHPGHLQCPVCSKRFKAKNLLEGHLVSHSDARPYQCDICQKTFKRTNTLAVHRRIHTRERNYICEVCGRSFVQATQLTSHRRRHFDKYTRHCSICNKGFFTNADLRCHMNVKHAAKEHVCKLCAKSFPNGHTLAQHARTHEPDYQPTKYQCEYCGKTFAYRNSMVTHAKSHTGENKYDCHLCGKSVTSKASLRDHLKLHGDEKKIVCDVCGKAFHKNSTLVVHKRTHTGEKPYVCESCGKAFTQHSTLVIHRRYHTGQRPYQCATCSRFVRPTRYQSASVIDIEDTKVDVLLEMPSVPIPVITKKKQQMRKLESEQQLIQPKLEPSHSENILDDDMPLAYYCRPCNTLLASQDLLDAHNSTQHKPKKRYGCAHCDNSYHTTRGLRKHLDQQHKNPDDDEDEEEEEVEEESQQEPGPGGYYYECEPCDKLYRFKYRYLSHLKTRQHKRTRLAHRKQQRLQEPTSFFECETCGKLFHHKSNYHKHLMSHTVGDLGCKHCPKQFRLFRDLTRHEKTHFSQSYKCTECDYETTVQAALNIHAARHTDRTELPYECNDCSKKFRKPTELQEHYNIHSGDKPFACQICSTTFSLRRQLSAHCRRLHPELKAKKVTSTACDICGRVLATKRSLFRHKESHSPTKHYLCDFCGKGLSSAEHLKKHRRIHTGEKPYVCDICGKGFTDSENLRMHRRVHTGEKPYKCDLCPKAFSQRSTLTIHRRGHTGERPYVCKICQRGFSCQGNLTAHQKTTCV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -