Msti009599.1
Basic Information
- Insect
- Megastigmus stigmatizans
- Gene Symbol
- -
- Assembly
- GCA_900490015.1
- Location
- UELV01180205.1:9389-12104[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-08 2.3e-05 24.9 0.0 7 35 50 78 46 84 0.90
Sequence Information
- Coding Sequence
- ATGAAAAAGGATATCATTCATAAAAACAAACTATTAAAAGaacttaatttgaaaaataataccTTAATTCAAGAATACAAGAAACTGAAGGAAAAGTACGAAGGTTTactaaaagaaaagagatataatGATTTCGATGATGAAATGGAAGCAATTACAGAAGTGGAGAAAGGAGTTTCCATACGGAAAGCTGCTGACATGTATCAAATGCCGAGAAGTACATTGCAGGCTAAACTCAGTTTCACCATTCCAGTTGAAGCTGCGGGGGGTCCTAGTACCTATTTGTCATATGAGGAAGAAGAAATTCTtgtgaaatgtattttttattgtggTAAAAGAGGCTTTCCTATCACAAGAAATATGCTTGTACAAAGCGTACAAAAACTTGTAATAGATTTGAAACGAGACACTCCATTTAAGAATAATCAACCTGGTAGACGCTGGCTGGAGGGCTTTCTGCGTAGACACCCAAGTGTTTGTACACGAGTTTGCCAAAATTTGAGCACAAATCGTGCATCAGCAACAGAAGAAGTATTGAAAACTTGGTTCAGTGAAGTACAAAGTCATTTAGAGAAGCTCAATTTATTGGACATTGACGgttcaagaatatttaatttagatgaaagtgcttttttttctcataccaAAAGGAGATAA
- Protein Sequence
- MKKDIIHKNKLLKELNLKNNTLIQEYKKLKEKYEGLLKEKRYNDFDDEMEAITEVEKGVSIRKAADMYQMPRSTLQAKLSFTIPVEAAGGPSTYLSYEEEEILVKCIFYCGKRGFPITRNMLVQSVQKLVIDLKRDTPFKNNQPGRRWLEGFLRRHPSVCTRVCQNLSTNRASATEEVLKTWFSEVQSHLEKLNLLDIDGSRIFNLDESAFFSHTKRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00969516;
- 90% Identity
- iTF_00969518;
- 80% Identity
- -