Msti008296.1
Basic Information
- Insect
- Megastigmus stigmatizans
- Gene Symbol
- lolal
- Assembly
- GCA_900490015.1
- Location
- UELV01138430.1:19656-21435[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-12 2.6e-09 37.5 0.1 1 38 326 364 326 368 0.93
Sequence Information
- Coding Sequence
- ATGACTTCACAGCAACATTATTGTCTGCGTTGGAATAACCACAGCGCCAACTTCATAACAGTATTTGAAGAACTCTTCAGAACTGAATCTTTCACTAATGTTACTATAGGATTACGATCTGGAGATACAATCAGGTGCCATAAATTGGTACTTGCTGCCTGTTCGTCGTACTTCAAACAGGTGTTGAACTTCTATCCAGACGAATCAGCTCTGCTTTTCTTAATTGATGTGGAAGATGACATAATAAGAGCAGTCCTTGAATACATGTACAGAGGAGAAGTAAATATATCTCAAGACCATCTTGGTGAATTACTGAGAGTTGCAACATATTTAAGGGTTAAAGGTCTTGTAGAAGATCCTGAACTAAGAGTCAGAAGAGAACAACCCATGTCTCACCCCGAGCCTCCTATGTCCCCTCCACCTGCCGTTAGCACAAGCACAATAAGCAACATGGCTCATAGCACCGGCTATGTATCTCCTCCCCAGAATGCACCTCCAATCGTTATTCCATATGGAAAATCCCCAGTTGAAAAGAACACTCACAACGATGTACCATTATGGTCCGCTTTCCCAGGAATCCCTATGCCTCAGTATCCCGTATCTGGACATCAACCTCCAGCACGTAGTCAGCAGCAATCGAACCTTGGTGGCTCTTATGAAAATGCTTCGGAGTCCTCTCCTTTGAGGAGGAAGAAGCTTTCCAGTCTATTAGTCAATCGCGATACACCAATTTTGAGAAACGTTCTTGGCCAAGGACAAGCTGATAGCTCTCAGGGTCTACCAACTGTCCAGAACGACAGATTGGAATCATTTTGCTCAAACAGCAATGGCTCAGATAACGATACGGACCGTCGCAACAGCGCCGATTTCTCTGAGCCTGCACCAGATTTTGAGGAAAAGCGAGCTAGAACCGAGAACTACGCAACGGTGACCAAGACAGGTGCCAAGCCCGAATGGAAACGCTACAAGCAGTACACTCGCGAGCACATAACCGAAGCCATGAACGCAGTCCGCGACAAGGAGATGAGCGCATTGCAAGCGGCCCGCAAATACGGCGTCCCCTCGCGCACCCTCTACGACAAGCTGAAGAAAGCCGGAATCCTGCCATCGCGCAGTGCCGGTATCCAGAGACGCGACTCCCGCTGCGGCAGCGCTCGTTTCCCTTACTCGCCCAGCGTCAACGGCAGCGTCTACGGCAACAACAATACCAGCAACGCCTTGTccgagagcgagagtgagaccAACCCCATCAGCCCCGCGATCGAGCCCCAGCCCAACGCACACGAAACCGGATTAGTCGTCAAGAATCAGGACATTGCCGATACTGGACTCCTCATGGACATGACCAGACGCACGCTAAGTCCCGCCTCCGTACACAACAATCGCAACAGCAGCACGATCGAGGACGAAGTCGAGGACCTGTCGATGGGTAGACACGCTAACACCTCCGCGATCGCCGACCTGAGGGCCATCCTGCCGACCGGCGTCACCATCAAGGAGGAGGACATCATGGATACCGATGAGCCGCAGCGCATTTGA
- Protein Sequence
- MTSQQHYCLRWNNHSANFITVFEELFRTESFTNVTIGLRSGDTIRCHKLVLAACSSYFKQVLNFYPDESALLFLIDVEDDIIRAVLEYMYRGEVNISQDHLGELLRVATYLRVKGLVEDPELRVRREQPMSHPEPPMSPPPAVSTSTISNMAHSTGYVSPPQNAPPIVIPYGKSPVEKNTHNDVPLWSAFPGIPMPQYPVSGHQPPARSQQQSNLGGSYENASESSPLRRKKLSSLLVNRDTPILRNVLGQGQADSSQGLPTVQNDRLESFCSNSNGSDNDTDRRNSADFSEPAPDFEEKRARTENYATVTKTGAKPEWKRYKQYTREHITEAMNAVRDKEMSALQAARKYGVPSRTLYDKLKKAGILPSRSAGIQRRDSRCGSARFPYSPSVNGSVYGNNNTSNALSESESETNPISPAIEPQPNAHETGLVVKNQDIADTGLLMDMTRRTLSPASVHNNRNSSTIEDEVEDLSMGRHANTSAIADLRAILPTGVTIKEEDIMDTDEPQRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00969776; iTF_00968717; iTF_00968972;
- 90% Identity
- iTF_00969776; iTF_00968717; iTF_00968972;
- 80% Identity
- iTF_00969776;