Basic Information

Insect: Megastigmus dorsalis
Gene Symbol: Bcl11b
Assembly: GCA_900490025.1
Location: UELU01128204.1:11902-24460[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.047 5.8 8.3 0.2 2 23 185 207 184 207 0.96

2 6 3.5e-07 4.3e-05 24.5 1.5 1 23 540 562 540 562 0.98

3 6 0.0019 0.24 12.7 1.2 2 23 582 604 582 604 0.97

4 6 2.2e-06 0.00027 22.0 3.2 2 23 813 834 812 834 0.97

5 6 2.4e-05 0.003 18.7 2.5 1 23 840 862 840 862 0.99

6 6 1.3e-05 0.0016 19.6 0.4 1 22 870 891 870 891 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.047	5.8	8.3	0.2	2	23	185	207	184	207	0.96
2	6	3.5e-07	4.3e-05	24.5	1.5	1	23	540	562	540	562	0.98
3	6	0.0019	0.24	12.7	1.2	2	23	582	604	582	604	0.97
4	6	2.2e-06	0.00027	22.0	3.2	2	23	813	834	812	834	0.97
5	6	2.4e-05	0.003	18.7	2.5	1	23	840	862	840	862	0.99
6	6	1.3e-05	0.0016	19.6	0.4	1	22	870	891	870	891	0.97

Sequence Information

Coding Sequence: ATGCGCCTAACGAGGAAATCGTCCAATTGTCTGTCCTCAGCGGAGACCTCGCAGAGCGCGGCCCCGCCGGACATCGTCCTCTGCGGCGGCTGCAGGGCCTCCTACCCCCTCAGCGAGATAGTCCGCTTCATCGAGCACAAGGTCAACCACTGCCGCAGCAACTTGCCGGGCTGTCAGTCGCCTTCGCCTACGGCCGCCCCCGAGGACTCCGATCCCGAGGACGCGCTCGCCTTGAAAGCGGCGACCAGTGCGGACGCCGGCAGTGGCGGCGTAGGCGAGAAGCTGAGCTCGGTGCCGAGCATATCGGCGCCCATAATCAAGAGGACCGGACGAGTCGAGAGTCCACCGACGCCGCATCAGGCAGGATctgccgcagcagcagccgaggcCGTCAGTCCGATCGAGCTGAGGGCGAGCGCGAGCTCGACGCCCAAGAGACGGACCACCGAGGCCAGCGAGGAGCTCCTCGACAAGGATGAGGCGCCCAAGAAGCCCAAGACCGAGAGCGTAGACGCGGACACCAATACCGTCAGCACAGAACCAAAGTGGCTCCAATGCAGCCAGTGCTCGCGGCGTCTGTCCTCCGCCTGGGAGATGCTCCAGCACGCCCAGACGGTCCACGGCTCGCGCCTCTACTCGAGCAACACGTCCTCGGCGAACTCCTCGTCGAACACGCCGGCGCCGAGTCCCCCTACGCCTACGCCCagccaccagcagcagcagcagcagcaccacctgAGCCCCCTGAATCACCTGAACCTGAGCGGCAAGTCGAGCGGCGGCTCCTCGGTCGCGAACTCCTCGGGCGGCACGTCCAGCGGCAGCGGGGGCGGAAGCGGCACCGGCAGCGCCGGCAGCGGAACCACCCGCCAACAGCTCCAAACCTCGGCGCCCCTCGTGCCCGATCCCCTCCACAGCTTTCTACGCATGCCCCAGCACCTCGAGCGCGGCTTCACCCCCATGTACAGGCCGGACCTGCTCGCCCTGCCCCTCGCCGGCTACCGAGGCTTCCAGGACCTGCAGACGGCCACGCGCAATCTGCAGAACCTCGGCGACTCCTTGCGCGGCATAGACGGCCTGAATCTCGGCGACCCCCTCATCAGGAGTTCCCTGGACACGCTCAACAACGCGCGCAACCTCGCGAACCTCGCGGAACTGTCGCACGCCGGCCGCGGCCTCGCCGGCCAGACCCACCCAACGCCACTCGAGTCGAACCGGGATTTTTATTCGGCGCGCCTAAGGAGCCTCGCTAACCCATCCTTAGGTGCGGCTCCACCCCACAACAACAGCAACGCTACGGTTAGCAACAACACCAGCGGCAGCGTCACCAGCAGCGCGGCTACCTCGGCCACGATAGCGGCCGcggccgcagccgccgccgccgccgccgccgctgcagcccAGAGCCACAACGGCGCGAAGCCGCCGAGCCCGGCGATCGCCGCGAATCCCACCAATCTCTCCCTGGTCAGCCATCCCCAGAAGGAGAACTCGCCCCCCTGCTACAGCCAGAGCCCCCTCGGACACCACAACAACAACAACTCGACCGACAGCGAGAAGACCTCGCCGCCCGTTGGCTCGACGCCCATCATCAGCGCCGAGAGCGTCGAGACCGTCTACAGCTGCGAGGTCTGCGACAAGAAGTTCCGCTTCCAGTCGAACCTCATAGCCCATCGCAAGAGCCACCGCGATAAGGAGCGCAACCAGTACGAGAACGCCTCCGAGGGCTCGAGCGTCTCCGCGAGGTGCGACCTATGCGAGACCGAGCTGACGAGCTTCACCGAGCTGAGGAAGCACATGCGCAAGGAGCACCAGGAGTCGATGGTCGCCCAGAGTCCCCAGGGCAGCGTCGAGACCGTGCCGGACGACGACAGCAgctgcgacgacaacatggaCCTCGACGACGGGGAGGAGAACGAGGGGAAGGACCGGGACGACGGGGAGGAGAACACGCCGGAGGATCTGTCGACGACCCAGGGCCAGTTGGGGGACGAGAGCCTCGTCGGGGTGACGGGAGGCGGGGCCAGGCTCGACTCGAAGCCCAGCCTCGTCGGCGACCTCATGGAGAAGTTCGGCCTGAGCGACATAGCCCAGTACTCGGAGGCCTATCGGCAGGCGCTCCAGGAGAACCACCGCAGCGGCTTCATCAAGGCCGAACAGACGGCCAGCCTGGCGATCTCGCTGAACAACAACAAGGAGAAGGAGAGCACCCTGTCGCCGACCGGCTTCAACACCTCGACGACGGCCAATATATTCTCGGGTCAGGGCTTCCCCCGGGCCGGTGGTCCGGACTTCGGCGGTCTCTGGCTGCCCAATCCCCACTACCTGGAGAGCAGCGAGTTCCGCAAGGCCAGCAAGGCGGCGACGAGCTCGAGCCTCGCGCTCCCGGGCCTACCGAGCCCGATCCAGAAGAAGGAGCGCAGCGGCAGGAACGACACCTGCGAGTTCTGCGGCAAGATATTCAAGAACTGCTCGAATCTCACGGTGCACAGGCGCTCCCACACGGGCGAGAAGCCCTACAAGTGCGAGCTGTGCGCCTACGCCTGCGCCCAGAGCTCCAAGCTCACCCGGCACATGAAGACGCACGGCAGGCACGGCAAGGACACGTACAAGTGTCGATTCTGCGACATGCCGTTCTCGGTGCCGAGCACCCTCGAGAAGCACATGCGCAAGTGCGTGGTCGTCGTGCAGCAGGGGCCGAAGTTAGCTTTGCCCTATCCGAGCAGCCAGGACGAGGACTCGTCGGTCAGCGCTAAAGACACTTGA
Protein Sequence: MRLTRKSSNCLSSAETSQSAAPPDIVLCGGCRASYPLSEIVRFIEHKVNHCRSNLPGCQSPSPTAAPEDSDPEDALALKAATSADAGSGGVGEKLSSVPSISAPIIKRTGRVESPPTPHQAGSAAAAAEAVSPIELRASASSTPKRRTTEASEELLDKDEAPKKPKTESVDADTNTVSTEPKWLQCSQCSRRLSSAWEMLQHAQTVHGSRLYSSNTSSANSSSNTPAPSPPTPTPSHQQQQQQHHLSPLNHLNLSGKSSGGSSVANSSGGTSSGSGGGSGTGSAGSGTTRQQLQTSAPLVPDPLHSFLRMPQHLERGFTPMYRPDLLALPLAGYRGFQDLQTATRNLQNLGDSLRGIDGLNLGDPLIRSSLDTLNNARNLANLAELSHAGRGLAGQTHPTPLESNRDFYSARLRSLANPSLGAAPPHNNSNATVSNNTSGSVTSSAATSATIAAAAAAAAAAAAAAAQSHNGAKPPSPAIAANPTNLSLVSHPQKENSPPCYSQSPLGHHNNNNSTDSEKTSPPVGSTPIISAESVETVYSCEVCDKKFRFQSNLIAHRKSHRDKERNQYENASEGSSVSARCDLCETELTSFTELRKHMRKEHQESMVAQSPQGSVETVPDDDSSCDDNMDLDDGEENEGKDRDDGEENTPEDLSTTQGQLGDESLVGVTGGGARLDSKPSLVGDLMEKFGLSDIAQYSEAYRQALQENHRSGFIKAEQTASLAISLNNNKEKESTLSPTGFNTSTTANIFSGQGFPRAGGPDFGGLWLPNPHYLESSEFRKASKAATSSSLALPGLPSPIQKKERSGRNDTCEFCGKIFKNCSNLTVHRRSHTGEKPYKCELCAYACAQSSKLTRHMKTHGRHGKDTYKCRFCDMPFSVPSTLEKHMRKCVVVVQQGPKLALPYPSSQDEDSSVSAKDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01468298;
90% Identity: iTF_00969890;
80% Identity: -