Basic Information

Insect: Megastigmus dorsalis
Gene Symbol: RREB1
Assembly: GCA_900490025.1
Location: UELU01141420.1:3406-9804[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.011 1.4 10.3 0.1 1 23 38 60 38 60 0.95

2 15 0.00019 0.023 15.9 0.3 1 23 75 97 75 97 0.98

3 15 2.2e-06 0.00027 22.0 3.1 1 23 103 126 103 126 0.98

4 15 0.27 34 5.9 0.0 3 23 228 250 228 250 0.92

5 15 0.42 52 5.3 0.6 1 19 334 352 334 354 0.95

6 15 0.59 72 4.9 0.1 1 23 467 489 467 489 0.96

7 15 2.8e-05 0.0034 18.5 0.3 1 23 498 520 498 520 0.98

8 15 0.00038 0.046 14.9 2.5 1 23 526 549 526 549 0.97

9 15 0.00086 0.11 13.8 1.0 1 23 935 958 935 958 0.96

10 15 0.0014 0.17 13.1 0.0 3 23 1242 1262 1240 1262 0.97

11 15 1.5 1.8e+02 3.6 6.7 1 23 1268 1291 1268 1291 0.96

12 15 0.003 0.37 12.1 1.7 1 23 1329 1353 1329 1353 0.97

13 15 0.046 5.7 8.4 1.0 1 23 1513 1536 1513 1536 0.94

14 15 0.017 2.1 9.7 0.4 3 23 1582 1602 1580 1602 0.93

15 15 1.4 1.8e+02 3.7 8.2 1 23 1608 1630 1608 1630 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.011	1.4	10.3	0.1	1	23	38	60	38	60	0.95
2	15	0.00019	0.023	15.9	0.3	1	23	75	97	75	97	0.98
3	15	2.2e-06	0.00027	22.0	3.1	1	23	103	126	103	126	0.98
4	15	0.27	34	5.9	0.0	3	23	228	250	228	250	0.92
5	15	0.42	52	5.3	0.6	1	19	334	352	334	354	0.95
6	15	0.59	72	4.9	0.1	1	23	467	489	467	489	0.96
7	15	2.8e-05	0.0034	18.5	0.3	1	23	498	520	498	520	0.98
8	15	0.00038	0.046	14.9	2.5	1	23	526	549	526	549	0.97
9	15	0.00086	0.11	13.8	1.0	1	23	935	958	935	958	0.96
10	15	0.0014	0.17	13.1	0.0	3	23	1242	1262	1240	1262	0.97
11	15	1.5	1.8e+02	3.6	6.7	1	23	1268	1291	1268	1291	0.96
12	15	0.003	0.37	12.1	1.7	1	23	1329	1353	1329	1353	0.97
13	15	0.046	5.7	8.4	1.0	1	23	1513	1536	1513	1536	0.94
14	15	0.017	2.1	9.7	0.4	3	23	1582	1602	1580	1602	0.93
15	15	1.4	1.8e+02	3.7	8.2	1	23	1608	1630	1608	1630	0.98

Sequence Information

Coding Sequence: atgtacgcgctGAAAATGACAGCCGAGACTGCACCTGATCAACGCGACGGCTACAACGAGAGTCAAACGGATGTTGCATCATCACCACTGGTTGACCAGCCGGAAGGTACCCACGCGTGCCCGGCTTGTCCTCTCGTACTCGCCACCTCCCGAGAACTGACCAATCATCTACGCGGCCACAACTCGCCCCGCAGCGCCACGGACGGCAGCGGCGAAGAAGACTACTCCTGCGGCGTCTGCCACAAGGTCCTTAGCTCAGCGAGCTCTCTGGATCGCCACGTGCTCGTCCACTCGGGCGAACGTCCCTTCAAGTGCAAACACTGCCAGATGGCATTCACCACCAACGGCAACATGAACAGGCACTTGAGAACCGCCCACAGGACGGTCTCGCCCAGCCACAGCTACACCGACTCCGAGGTCAGCAGCGACTTCGAGAAGCCGCGCGACTGCCGCCTCATTCAGGAGGAGTACAACAACAACGAGATCGCCAAGAGGACCTCGCCCGAGCTCATCGCCGAGGAGATGAGATCGAGGACGCCCTCGGAGCCCCTGATCGGCAAACGCAGACGGCTCGACTACGCGGACGAGGCCGACAGCCAGAAAAAACACAAGATCCTGCTGAGCAACGCGAGGACCGAGGTACACGGCAGCCACACGGAGTCGAGTCAGATAGGCCTCGGCTGCACCATCTGCGGCCGCGTCGACTTCCCCAACGCGGGCCTGCTCGAGGCCCACTTGGAGACCAGCCACAAGGACCTGTCCACCGAGTGCTACACCTGCCGACTCCCCTGCAAGACCATACAGGGCCTCAATCTCCATCGGCTGTTGAGCCACCCGCGCGACTTGCCGGCCACCTTCTACAGCAACAACAGCCACAACTCCGTGGTCGGGTTCGAGGACCTCACCTTCATCGACTTCTCCTCCGAGAAGTTCACCACGATCGCGAGGGCCGCTTGCGAGAAGTCCCTGCATCGGCCCGCGTCCGGCGAGACCTCCAAGTTCCAGTGCTCGAAATGCCTGCGAGCCTTTCCCTGCCGATCGGCCCTCGAGGCACACGAGACGGATTGCGGCTTGCTGCCGGTCGCCGATCACCGCATGACCAGCGATCAATCCGTCAGGGAGTACTTCTTCGCCGGCCTCGATCTGCAGAACAAGGCCGCTCTGGCCGAGGCCAAGGAGGGCAAGGATCTTGCCGACATCTCCAGCATACTGTCATTGACGTCCGGCCCGATAATGCAGGGAATGTCCAGATCGGACGCCAGCACCCCGGACAATTGCAAGATCAAGCAGAGCTTCGGCTCGTCCGGATCGTCCGGCACACCCTCCTCCGAGTATCACGAGGAGGAGACTCAGGACGCCTTCGCGGCCGAGTTCAGGAAGATGAAGCTGAAGGGCGAGTTCCCCTGCAGGCTGTGCAAAGCTATATACCCGAATTTGCGCGCGCTCAAGGGTCACAATCGGGCGCACACGAACGTCCCACCCGGTATGCCGTATCCTTGCAACATGTGCCCGTACAGTAGTACGGACAAGGCTACCCTGGTGAGACACTTGCGCTCGCACAACGGCGACAGACCCTACGAGTGCTCGATCTGCAATTATGCATTCACCACCAAGGCCAATTGCGAGAGACACGTGCGCAATAGGCACGGCAAATTGTCGAGGGAGGAGATCAAAACTGTACTGATCTATCATCCGAACGAGGACTCGACGAACGACAATCTTGGGCGTACCTCGCCTCGTGGACTGATGCGGGAGGAGGTTCGCAAGTCCCTCGTCTATCCGAACGAGCGCGAAGACCTTACACCGCAGCACATGCACTATCCAGGCGAGATCAGGCTCAAGGACGAGTCCAAGCTTCGTCAGCCCGGATATCCGGTCTCGCACATGTTCTCGGGCCCGTCTACGATGCAGCCCATGTCATTGACCAAATCTCAACATAGCATGAAGCACGTCGATGACGACCTCGATTCCAGGTCCTCGGAAGACAGCGTATCTCTAGTCATCAGCGAAACCAAAGCAGACCCACACCAAAGAATCCAAGCTAGCCCGATGGATCTGAAGAAGTCGAGCGCCAACGAATCGTCGTGCGTGCAAAGTGCAGCCGGCGAGGACGCGCCATTGGACCTGACAATGGATGTGTTGGACCTCAGCAAGAGGGCAGCCACGGTAGCTAATgcagccgccgcagccgccgccgccgccgccaacgCCGCCAACGCCGCCAACGCCGCCAACGCCGCTGCGGCAAATGAGAATAGGACGAGACACTTGAACGGCCACGCCGACAATCCCAACGGTAACAATCAAGATTTTTACGCCGCTAATCAAATGCTGCTGACGCAGGCACTTCTGAATTCTGGCCAAGTTGCCGCTCAGTCGTCACCGATCCAGGCATTCTACGCCAAGGCCATAATCTACCAAAATTTGGCATCGTTCGCTACGCCTAACATGCTCCAACCGTATGTTCAATCCATGTTCCCTCCCCTATACGATCAAAATTACGCGGTAAAGGACAAGCAGCAGAAAGAATTGGTACGCGGTCTTCAGACCAGCGGAGGAAGTCTTGTGGAGCCTTCTGCTCCAGGTTACGGTACTGGCTTTCTCCACGCCAGAGATCCCGTGGCAAGCAACACCGTCAACGATCAAAAAGCCGCTCTCAAGCCTTCGAAGCTCATGAGCAAAAGCATATCTCCGCGGGACAAATTGGAGAACTCGCCGTCCTCCAATTCCGTCAAGATGGTCATTAAGAACGGAGTGCTAATGCCGAAACAGAAGCAACGGCGCTACAGAACCGAGCGACCCTTTTCCTGCGAGCTTTGCTCAGCGAGGTTCACGCTAAGAAGCAATATGGAGAGGCATATCAAGCAACAACACCCCAAGTCCTGGAGTGCGCGAGCAAGAGGATCCCACTCGAACAGAGGCAGACCACCTGCCAGTGTTCGAGTGGCACCATCATTGCCACAAAATCTAGCCCAACCGGCGAATCACGCACCCTTAACTCACCATCAGTCCTATTCGAATATACTGCCTAAGCACAATCAGCCATCTACCTCGAGTTATAACAAGCATCCCATCTCTGATCATGTCAAATATGCAATTTTAGCACAACAATTGAAAGGTGGCAACAAGCAGGAAGAAGTCGAAAGCAACGAGGAACTTATAATTGATGAGGAGTCGGCAAACATAGAAAAAGAGGCTAGGGAAGTCGCAACTAGAGAGCCGACTGAGAGGACGCTGAGTCTTTTGAGAGGCAAGTTGGAAGCTCACATCGAATGTAAAACAACTGAAAACGTTCGTAAAGAGGACAGATCGATAGATGAATTGAAAAAGCACGTGAAACAGGAATCAAAATCCCATGACGAGACTAATCAAAACAAAGATGACGCTGGCGATTCCAATCAGGAAGAAATGCCCTTGAAACCGAAAGAGACTGTTATCAAAACGGAAGTGcaagaagaaaataatgaaaacgaaGATTTGGCAAGTGTGTCAGAAATATTGGACAATGCCTCGCAAAACTATCAACAATTTCAATCACAGTACATGAGCGACGAAGAGGGTTTGGTCGCCTCGACGAGTGACTGCAACCAATCGGGTAGCGACGAAAAGTCAGACTCGGTAAACTCTGGAAATTCGGACCACTCGACAACCACtttcaaaaaaaagaagatgaCGAAAAAGAAGGAGAAGTCGGCCTACTCGATGGCTCCGAACCGCGTGATTTGTCCTTACTGTGAACGCCCCTTCCCTTGGACATCTTCACTCATGCGACACATACTAACTCACACGGGCCAAAAACCGTTCCAGTGCATGCACTGTTCTTTACTGTTTACCACGAAGAGCAACTGCGACCGTCACCTCCTGAGGAAGCACAAAAACCACGCGAGCGAAGTAACGCGAACGCGAAGTATCTCATCACCCGAGCCACAAGAAGCACCCAACAATAATAGTCAATTCGCTATGAGAAACGTGCCCGAGAGGCCCTATAAATGCAACCAGTGCCCAAGCTCGACCTTCTCAACGTTGggcaatttaaaaaaacaccAATCTATGAAACATTGCCAGGACAAGTCGAGGCCCGTCTCACCACTGAGTGAGCCGCAAAACAGTCCTCAACCGGAGGAGGAGAGTCCTCAAGACTGCTCCCAGGAATGTCCACAAGAGAACGTGCAAGATTGCTCACAGGAGGACTCACCCCAAGAGGAACCTCAGCATTACCACCAAGATTCTGATAAGCAACAAGACCAAAGCGGATACGAGAGCCAATCTTCGGGCGTTTCAGATAATATGGATAGCGCGAATTCGGCCCCAACCGATGTAGCAAAGGAATCAAACGATAACAACAATCCAAGCACATCGAACTATGGCAACGATCCAAGCCCATCGGGTTATGGTAACAATCCAAGCACATCGGGTTATGGCAACAATCCAGGCTCGTCGAGCGACGGCAACACTGCAGGCCCGTCGAACAACAATAATTCCAAGTCGGGGAAACGGTCACCCAGGTCGTCACCAGGACCTGGCACCGAGGCTGGCTTCAAGTGCTACCTCTGCGACAGGAATTTCTCCGAGAGGCAGGATAACCTCGATCACGTCAGAGACAACCACCCAGACGACTACGAGATCCTGAAGCTCAAGGGCGCTCTAGATATGGAGATAACCGAGGATCCGCAACCGCTGAATCCCCCGTCATCGCAGCCCAGCGATGGGAGATTTCCCGACTACAGCAACAGAAAGGTCATCTGTGCTTTTTGCATGCGCCGATTCTGGTCAGCCGAGGACCTGCGCCGCCACATGCGCACCCACACCGGCGAGCGTCCCTTCTCCTGCGACATTTGCTGCCGGCGCTTCACACTGAAGCACAGTATGCTGCGCCACCGCAAGAAGCACGAGTCCGTAGACTCGGCCATGTTCGTTGGGACGAGCGGCGACGAGGACAACGCCTCCATGGTTCAGCTGCCCACGATAACGCCGAGGTCGCAGCATCAGCCTTCCACCAGCACTGCCGCCGGCATTCAAGAGCGGGCCTCGCTGCCCCAAGTGGCCAGAGTGGCGACCGGTGACGCCGCGCCCAGTGGATTGATGAGATTCAATCCCTACGACAACATGACATCGATGACCGGTGCTCAGAGCGTAGACATGTCTGCCAGTGGGACCAACGACGCCAGCGAAAACAACGACAATGATCTGATCTCGAATCTGTTGGGCATCAGAGATAGCACCATTATCGATCGAATGCTTGGCTCGTCGGTAGACGACGCCGCCAGAATCTTGGGAGTCAATGAGAGACCAGAAGGGGACTCTGCGGAGCAATAG
Protein Sequence: MYALKMTAETAPDQRDGYNESQTDVASSPLVDQPEGTHACPACPLVLATSRELTNHLRGHNSPRSATDGSGEEDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKHCQMAFTTNGNMNRHLRTAHRTVSPSHSYTDSEVSSDFEKPRDCRLIQEEYNNNEIAKRTSPELIAEEMRSRTPSEPLIGKRRRLDYADEADSQKKHKILLSNARTEVHGSHTESSQIGLGCTICGRVDFPNAGLLEAHLETSHKDLSTECYTCRLPCKTIQGLNLHRLLSHPRDLPATFYSNNSHNSVVGFEDLTFIDFSSEKFTTIARAACEKSLHRPASGETSKFQCSKCLRAFPCRSALEAHETDCGLLPVADHRMTSDQSVREYFFAGLDLQNKAALAEAKEGKDLADISSILSLTSGPIMQGMSRSDASTPDNCKIKQSFGSSGSSGTPSSEYHEEETQDAFAAEFRKMKLKGEFPCRLCKAIYPNLRALKGHNRAHTNVPPGMPYPCNMCPYSSTDKATLVRHLRSHNGDRPYECSICNYAFTTKANCERHVRNRHGKLSREEIKTVLIYHPNEDSTNDNLGRTSPRGLMREEVRKSLVYPNEREDLTPQHMHYPGEIRLKDESKLRQPGYPVSHMFSGPSTMQPMSLTKSQHSMKHVDDDLDSRSSEDSVSLVISETKADPHQRIQASPMDLKKSSANESSCVQSAAGEDAPLDLTMDVLDLSKRAATVANAAAAAAAAAANAANAANAANAAAANENRTRHLNGHADNPNGNNQDFYAANQMLLTQALLNSGQVAAQSSPIQAFYAKAIIYQNLASFATPNMLQPYVQSMFPPLYDQNYAVKDKQQKELVRGLQTSGGSLVEPSAPGYGTGFLHARDPVASNTVNDQKAALKPSKLMSKSISPRDKLENSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFSCELCSARFTLRSNMERHIKQQHPKSWSARARGSHSNRGRPPASVRVAPSLPQNLAQPANHAPLTHHQSYSNILPKHNQPSTSSYNKHPISDHVKYAILAQQLKGGNKQEEVESNEELIIDEESANIEKEAREVATREPTERTLSLLRGKLEAHIECKTTENVRKEDRSIDELKKHVKQESKSHDETNQNKDDAGDSNQEEMPLKPKETVIKTEVQEENNENEDLASVSEILDNASQNYQQFQSQYMSDEEGLVASTSDCNQSGSDEKSDSVNSGNSDHSTTTFKKKKMTKKKEKSAYSMAPNRVICPYCERPFPWTSSLMRHILTHTGQKPFQCMHCSLLFTTKSNCDRHLLRKHKNHASEVTRTRSISSPEPQEAPNNNSQFAMRNVPERPYKCNQCPSSTFSTLGNLKKHQSMKHCQDKSRPVSPLSEPQNSPQPEEESPQDCSQECPQENVQDCSQEDSPQEEPQHYHQDSDKQQDQSGYESQSSGVSDNMDSANSAPTDVAKESNDNNNPSTSNYGNDPSPSGYGNNPSTSGYGNNPGSSSDGNTAGPSNNNNSKSGKRSPRSSPGPGTEAGFKCYLCDRNFSERQDNLDHVRDNHPDDYEILKLKGALDMEITEDPQPLNPPSSQPSDGRFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSAMFVGTSGDEDNASMVQLPTITPRSQHQPSTSTAAGIQERASLPQVARVATGDAAPSGLMRFNPYDNMTSMTGAQSVDMSASGTNDASENNDNDLISNLLGIRDSTIIDRMLGSSVDDAARILGVNERPEGDSAEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -