Basic Information

Insect: Megastigmus dorsalis
Gene Symbol: Prdm15
Assembly: GCA_900490025.1
Location: UELU01138528.1:35370-38603[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00026 0.032 15.4 2.9 2 23 412 434 412 434 0.95

2 7 4.3e-07 5.4e-05 24.2 0.7 1 23 445 467 445 467 0.98

3 7 6.4e-06 0.00079 20.5 1.5 1 23 473 495 473 495 0.97

4 7 0.0081 1 10.7 0.2 3 23 504 524 502 524 0.92

5 7 2.4e-05 0.0029 18.7 3.9 1 23 533 555 533 555 0.97

6 7 2.4e-07 3e-05 25.0 0.5 1 23 561 583 561 583 0.97

7 7 4.3e-06 0.00053 21.1 0.6 2 23 594 616 593 616 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00026	0.032	15.4	2.9	2	23	412	434	412	434	0.95
2	7	4.3e-07	5.4e-05	24.2	0.7	1	23	445	467	445	467	0.98
3	7	6.4e-06	0.00079	20.5	1.5	1	23	473	495	473	495	0.97
4	7	0.0081	1	10.7	0.2	3	23	504	524	502	524	0.92
5	7	2.4e-05	0.0029	18.7	3.9	1	23	533	555	533	555	0.97
6	7	2.4e-07	3e-05	25.0	0.5	1	23	561	583	561	583	0.97
7	7	4.3e-06	0.00053	21.1	0.6	2	23	594	616	593	616	0.95

Sequence Information

Coding Sequence: ATGGAAGTGGATACAAGTGTAACTGAAATATTAGAACAGGCTGGAGAAGGAcaagaaattattttagaacCTGAGGGAGAATGTGGAGATGACGAAATTGAGGAAATTGTTGAAATCATTGAAGAAATTGAAGAAGTTGATGAAAATGGAATAGAACAAATAGAGGAAATAGAGGAAGAAACTAATATTCAAGAGGAATATGTTTCACAAAGAACTAATAGTGTGTACGTGCAAGAAGAACCCAGTGATGTCTACGATGAATCGCAAGTTGTATATACGGCATCCAAACAATCTTCTAACAGTCAAGAAAAGGTTTATAGTCAAGTTCGTTATGATGCCTCAGCTGATTGGGAAGATGAAGATTATGAACAAGAAGATCAAAATAATTTGGTAGAAAATGCAGTTGAAGAATCAAATGCTGGAAGCACTCATTCATACACAACTTATAATAATGAAGCTAGTAATGATGTAAATAATCATGACGAGAGAACAGAGAATTGTCGAACAGAAGGAGATTTTGATCATAGTACAAATCAAGACCATAGCATCGATGGAGATGAAATTCAGCAAGAAATTGTtcaaaattcagaaaataatttaGTGTACACTGTTTTAGGGTCTAAGAAACAAGCTAAATCAGctcaagaaaataaatcagATATGGAGTTTGTAGAGgTGCAAAGGTATAAAGATACTAATTTACCTGATGATGGAACCATTTATTATGCTCTGAATGATGGGGATGGCACATATGTTCAAGCTGTTGAAGCAGATGAACAACAGTATCTTCAATATGCCAATGAAGAATCAATGGAACAAGAAAGTCAGTGGGAAGCACCCAATCAAAATGAGGAGGATCAACCCGAGCCGATGGAACAAGATCAAATTTTCTTACATGAAGATGAAGATGGtcaattgtattttaaaaatgagcATGGACAACTACAACCTGTTTACCTCACTCCTGATGGAAATTATGCCATAGCAGAAAATAGTAGTGATGAACAAGACAGTCAGGAAGATATAAACCAATTACAGGAAGAACCAGTAGATACAGATAATTACGTACTACCCGATTTAGATTTGAAACCATTAACTtctaaaaaacgCATGCACGATCAATCTCAAGAAAATGATAATGATGATAGTACTGTAACAATTTCGTTAATAATATCTGAAGATGAACATGGGCAAAAACGAACTCAAGTTATAATACCAACCCCAGCTGAAGCAAAATGTGACTTATGTAATAAGACATTTAAGACTTCTTTACAGTTATTAAAACATAACAGATTAAAACATGCTAGAGAAGAAGATATTACTACAAGAAATTTCCCCTGCGATTTATGTCCTAAAAGATTTTCCGACCAAAATTCTTTGGCGCGTCACCGTAAAACTCACACCGAAGGTCGACCGTTTCAGTGTTTGGAATGTCACAAATCTTTTCCCACAGCTAATACTCTTCGGAAACATTTGGCGTTGCATAATCCTGACTCTCATCCGTTACCGTGCATTTATTGTGGACGACGATTTTCAGACAAAGCCATACTTATGAAACACGAACAATCACATTTAGCTGGTGAACCTAAAAGGACGCATGTTTGTGACATTTGTCAAAAATGCTTTACGAATGCTACAGACTTAAATATTCATAAGAAAAATCACGATCCAGATAGAAAATTTGATTGTCAAGTTTGTGGAAGAGAATTtaatcgattaaataatttacagcGCCATATGATGGTCCATGAACAGcAAGGAGCAAATGAAGAAATTTTGTCATGTAATGTTTGCGGCATTACATACAAATTTTCGAGTTCTTTAACCAGGCACATGGTAACTACACATATGAATCCTGAGAAACTTCGACAGCAAGCTGAGGAGCAACGAAGGAAACGTGAAAATAATTATCGGCGTTATTTAGAAAATCGAAAAACCTATGAAACTCAACAACCAAAGCGCCCTTATCGACGTTCTACCGGCAGATTAATGGACGATCAAGACGATGAAGCTGATTGA
Protein Sequence: MEVDTSVTEILEQAGEGQEIILEPEGECGDDEIEEIVEIIEEIEEVDENGIEQIEEIEEETNIQEEYVSQRTNSVYVQEEPSDVYDESQVVYTASKQSSNSQEKVYSQVRYDASADWEDEDYEQEDQNNLVENAVEESNAGSTHSYTTYNNEASNDVNNHDERTENCRTEGDFDHSTNQDHSIDGDEIQQEIVQNSENNLVYTVLGSKKQAKSAQENKSDMEFVEVQRYKDTNLPDDGTIYYALNDGDGTYVQAVEADEQQYLQYANEESMEQESQWEAPNQNEEDQPEPMEQDQIFLHEDEDGQLYFKNEHGQLQPVYLTPDGNYAIAENSSDEQDSQEDINQLQEEPVDTDNYVLPDLDLKPLTSKKRMHDQSQENDNDDSTVTISLIISEDEHGQKRTQVIIPTPAEAKCDLCNKTFKTSLQLLKHNRLKHAREEDITTRNFPCDLCPKRFSDQNSLARHRKTHTEGRPFQCLECHKSFPTANTLRKHLALHNPDSHPLPCIYCGRRFSDKAILMKHEQSHLAGEPKRTHVCDICQKCFTNATDLNIHKKNHDPDRKFDCQVCGREFNRLNNLQRHMMVHEQQGANEEILSCNVCGITYKFSSSLTRHMVTTHMNPEKLRQQAEEQRRKRENNYRRYLENRKTYETQQPKRPYRRSTGRLMDDQDDEAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00969857;
90% Identity: iTF_00969857;
80% Identity: -