Basic Information

Insect: Megastigmus dorsalis
Gene Symbol: -
Assembly: GCA_900490025.1
Location: UELU01144361.1:98305-101746[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00023 0.028 15.6 4.0 1 23 232 254 232 254 0.98

2 11 0.021 2.6 9.4 11.8 1 23 260 282 260 282 0.95

3 11 8.3e-05 0.01 17.0 6.8 1 23 288 310 288 310 0.99

4 11 3.6e-05 0.0044 18.1 1.0 1 23 316 338 316 338 0.95

5 11 3.3e-06 0.00041 21.4 1.2 1 23 344 366 344 366 0.97

6 11 5.9e-06 0.00073 20.6 0.2 1 23 372 394 372 394 0.97

7 11 8e-05 0.0099 17.1 1.5 1 23 399 421 399 421 0.97

8 11 3.3e-06 0.00041 21.4 0.0 1 23 427 449 427 449 0.96

9 11 0.00027 0.033 15.4 0.5 1 23 461 483 461 483 0.98

10 11 4.9e-06 0.00061 20.9 2.5 3 23 549 569 547 569 0.96

11 11 2.4e-05 0.003 18.7 4.6 1 23 579 601 579 601 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00023	0.028	15.6	4.0	1	23	232	254	232	254	0.98
2	11	0.021	2.6	9.4	11.8	1	23	260	282	260	282	0.95
3	11	8.3e-05	0.01	17.0	6.8	1	23	288	310	288	310	0.99
4	11	3.6e-05	0.0044	18.1	1.0	1	23	316	338	316	338	0.95
5	11	3.3e-06	0.00041	21.4	1.2	1	23	344	366	344	366	0.97
6	11	5.9e-06	0.00073	20.6	0.2	1	23	372	394	372	394	0.97
7	11	8e-05	0.0099	17.1	1.5	1	23	399	421	399	421	0.97
8	11	3.3e-06	0.00041	21.4	0.0	1	23	427	449	427	449	0.96
9	11	0.00027	0.033	15.4	0.5	1	23	461	483	461	483	0.98
10	11	4.9e-06	0.00061	20.9	2.5	3	23	549	569	547	569	0.96
11	11	2.4e-05	0.003	18.7	4.6	1	23	579	601	579	601	0.97

Sequence Information

Coding Sequence: ATGTGCACCACACCCGGGAACACCGGTTCCGGGTTTGGCTATGCCACATGGTCATTTAGCGGACCCGGAAATGATAGCCGGGAGAACACACAAAGTGACATTGCCGGTACCATCAGTTACGCAGCAGTTAACAACAATCAGGATCAGGGATCTAGCCCTAAGATACAGATCGATGTTAAACCAGCAAAGATACAAAATAGTGCCCACAGAAGAACCATGTTTACTATGAATGAAAGCTGCCAACAAACACCCACTACAACGCATCACGGACATACAGGAGCTCATAATCAAACTTCCCACGTAACCCACGTCAGAACGAAGAAACATCATGATGTATTTGCACTAACTTGTGACAAAGGTGGCTGCAACTGTGATGCCCATCACTCGACACCTCCACCATCCCTCTTCCCTAATACATTAGTTTTTGCTACAGATAAACATACTATGAGCAAGCATTTTATGACTCCAATAGGTCCTTTACAGCTTACAGCAGAAGAGTGCAACGAAATCCTGAtgaagagagcagcagcagcatccagCCAGTCCAATTCCAACAATGTGGCATCAAGTCAGACGGATACTACCCACTTTGGCCATGTTCTCACTCATGTAAATACAACACAAATAGATACTAAACCTAATAAGCAGCAACAAGACATGGGATCGCAAGTTCGTGTACCCAAGGAAAGGCCGTACTCTTGTACAGAGTGCGGCAAGTCCTTTTTATTAAAGCATCATCTCACTACTCATGCACGAGTACACACAGGGGAACGGCCTCACATTTGCGTACACTGTGGCAAGAGTTTCGCGCACAAACACTGTCTTCATACTCATCTTCTACTCCATAGCGCTGAAAGACCCTTTCAGTGCCGGGAATGTAAAAAATCCTTCACATTAAAGCATCATCTGGTGACACACACTAGAGTACACACGAGAGAACGACCATTTGTCTGTCCTGAATGTGGCAAAGCCTTTCCCTTGAAACGTCACCTCGTGACACATAGTAAATTCCATACAGGGGAACGTCCCTTTGTCTGTGAAGAGTGTGGAGAATCTTTTGCTCAAAAGGAACACTTGACCATGCACTCGCGCTTCCATGGCAGCTTGCATCCATTTGTTTGTCCTGATTGTGGCATGAGCTTCCAGAGAAAGTTCGAACTGGTTAATCATGGACGTCTACATGGTAGGATACCACACTCTTGTTCAGTCTGTGGAAAAGAATTTCTGCAGAAGAGAACCTTACTGGCACACATGCGGCTTCATACTGGAGAAACACCTTTTGCATGCACTGTCTGCGGTGAAGCTTTTCCAAGGAAGTCTGATTTAATAGCCCACTCCAAGATTCACAACAGCAGTAATGCTGATTCGGACACAAAACCCTTTACATGTCGAGAATGTGGACTAGAATTTACTAACAGGGAAGCCCAGACATTGCATTTAAGGTTACACTCAGCAGATAGAACACTAGTGACTGATCTTTGTGGACTCGCAGCAACATTTCAACAGACAACAGGACATTTTCTTACCGCTAACACCTCCAGTGCTCATCAGATGAACGGACCATTGGGCGGGTCGAGCGTGAGCCACATGCACGGCGCCACCCAAACTTCGCCTCCAGTGGGACCCAAGCCCAAGCCTCACCTCTGCCCTGACTGCGGCCGAGGCTTCGCACAGAAGCATGGCCTCTCCCAGCACCAGCGCCGACACACGGACGGCAGCTGCCACATCAGGTCGCACGTCTGCGACAAGTGCGGCAAGGCCTTCTTCCAGAAGAACCACCTGCTGCTCCACCAACGTCAGCACATGGACCCGCCGCCGAGCATACTGCGCCAGCAGCAGAGGCAAGCCGCCCAGGCGGCGGCCCAGGCTGCTCAAGGCAACGCAAGCTCCGCAATACAATTGAACGTCACCATGTGA
Protein Sequence: MCTTPGNTGSGFGYATWSFSGPGNDSRENTQSDIAGTISYAAVNNNQDQGSSPKIQIDVKPAKIQNSAHRRTMFTMNESCQQTPTTTHHGHTGAHNQTSHVTHVRTKKHHDVFALTCDKGGCNCDAHHSTPPPSLFPNTLVFATDKHTMSKHFMTPIGPLQLTAEECNEILMKRAAAASSQSNSNNVASSQTDTTHFGHVLTHVNTTQIDTKPNKQQQDMGSQVRVPKERPYSCTECGKSFLLKHHLTTHARVHTGERPHICVHCGKSFAHKHCLHTHLLLHSAERPFQCRECKKSFTLKHHLVTHTRVHTRERPFVCPECGKAFPLKRHLVTHSKFHTGERPFVCEECGESFAQKEHLTMHSRFHGSLHPFVCPDCGMSFQRKFELVNHGRLHGRIPHSCSVCGKEFLQKRTLLAHMRLHTGETPFACTVCGEAFPRKSDLIAHSKIHNSSNADSDTKPFTCRECGLEFTNREAQTLHLRLHSADRTLVTDLCGLAATFQQTTGHFLTANTSSAHQMNGPLGGSSVSHMHGATQTSPPVGPKPKPHLCPDCGRGFAQKHGLSQHQRRHTDGSCHIRSHVCDKCGKAFFQKNHLLLHQRQHMDPPPSILRQQQRQAAQAAAQAAQGNASSAIQLNVTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00144040;
90% Identity: iTF_00692322;
80% Identity: -