Mdor001613.1
Basic Information
- Insect
- Megastigmus dorsalis
- Gene Symbol
- Zfy2
- Assembly
- GCA_900490025.1
- Location
- UELU01145722.1:122252-127956[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.0023 0.29 12.5 0.1 2 23 76 97 76 97 0.98 2 30 0.62 77 4.8 0.1 1 23 102 125 102 125 0.93 3 30 0.023 2.8 9.3 1.9 3 23 132 152 130 152 0.97 4 30 0.0024 0.3 12.4 1.4 1 23 180 202 180 203 0.95 5 30 0.66 81 4.7 6.2 1 23 212 234 212 235 0.96 6 30 0.2 24 6.4 0.2 2 23 242 262 242 262 0.97 7 30 0.00025 0.03 15.5 1.2 3 23 270 290 268 290 0.98 8 30 6.6e-06 0.00081 20.5 0.6 1 23 296 318 296 318 0.98 9 30 0.00041 0.051 14.8 0.2 2 23 374 395 373 395 0.96 10 30 9.8e-06 0.0012 19.9 2.6 1 23 401 423 401 423 0.98 11 30 5.6e-07 6.9e-05 23.8 0.5 1 23 429 451 429 451 0.98 12 30 0.038 4.7 8.6 4.3 3 23 459 480 458 480 0.96 13 30 0.00056 0.069 14.4 1.6 1 23 485 507 485 507 0.98 14 30 1.6e-05 0.002 19.2 1.0 1 23 516 538 516 538 0.98 15 30 1.3e-05 0.0017 19.5 1.2 1 23 544 566 544 566 0.97 16 30 1.6e-05 0.002 19.3 0.8 2 23 573 594 572 594 0.97 17 30 6.2e-06 0.00077 20.5 1.6 1 23 600 622 600 622 0.98 18 30 4.8 5.9e+02 2.0 0.2 1 23 709 732 709 732 0.93 19 30 0.59 73 4.9 4.9 3 23 740 761 738 761 0.93 20 30 1.7 2.1e+02 3.5 1.1 1 23 796 820 796 820 0.91 21 30 6.7e-05 0.0082 17.3 6.6 1 23 840 862 840 862 0.98 22 30 0.0012 0.14 13.4 4.2 2 23 868 889 867 889 0.96 23 30 0.0025 0.31 12.4 0.1 1 23 894 916 894 916 0.97 24 30 3.4e-06 0.00042 21.4 0.9 1 23 924 946 924 946 0.98 25 30 0.31 39 5.7 2.3 1 23 952 975 952 975 0.93 26 30 0.00036 0.045 15.0 0.3 3 23 988 1008 986 1008 0.96 27 30 2e-06 0.00025 22.1 1.8 1 23 1014 1036 1014 1036 0.96 28 30 5.3e-08 6.6e-06 27.1 0.2 1 23 1042 1064 1042 1064 0.98 29 30 4.1e-07 5.1e-05 24.2 0.9 1 23 1070 1092 1070 1092 0.98 30 30 0.00039 0.049 14.9 1.1 1 22 1098 1119 1098 1119 0.97
Sequence Information
- Coding Sequence
- ATGTATCCCGAAAAGTTGATCTCggtcaattattttgtaacgaAATTAACCATTTGtttgtgtTTAAACTCGAATCGTCAGGGCACGAAAATCAAATCCCCCCGAGAAAATTTTCCAAATGAATTATTCACGACCTTGCAGTTCAAGTGCCAATGTCATCCCAATACGTCGTATACGTGTGCTTCCAGATCGAAAAGGAGAGCAGCACCCAGGCCTCAACAGCCCAAATGCCGCTACTGCTCCAAGATCCTGGCCAACCAAATCGAGCTCGCCGTCCACCTGCGCATCCACACCAAAAAGAGCTACGTCTGCGACTTTTGCGGTGTGCCACAGATCTCTAGCTCAGCTCTGAGCGAGCACCTCGGCAAGTTTCACAAGGAGCGCAGTTTCGGCTGCACCAGCTGTCGGCGATTCTTCAGTAATGGACGCTCGCTGAAACTCCATTGGCGCAGCCACAACCGGCAGCCCGTAGTTaagacgaagacgacgacgattGCGACGACTAAGACTAAGAAGAAAAAACGCGAGGTGAACAGACACGTTTGCCTCGTCTGCGATGCGAGTTACAGTACTCTCGCCTACCTGAAGCTCCACGCGAAGAGCCATCACGCGGATCCGCCGGTTCGCCAGTCCTACAAGTGCGACAGGTGCGACTACAGCAGCCACTACAAGACCAACGTGAGCAAGCACGCGTCGCGCCACCACAGCGACGTGAATAGGCGTCAGTGCGGGATATGCTACAAGAGCCTCGACAGGACCTACGTAGCGATGCACATGAGGATACACACGGGCGAGAAACCCTACGGCTGTAGCTTCTGCGACAAGAGCTTCACCATGAGGAAGTATTTGGTGCTGCACGAGAGAACGCACACGGGTGAGAAGCCCCATCAGTGTCAGCTCTGCGGCAAGGGGTTCGCGCAGTTGTCGCCCCTCAAAGCTCACGTCAGGCGTCATGCTGAAGGAGGTACACCCTCTGCTGAACGGAATCCGCTCGAATTGGACTTTATAAAGGATGACATATTTGATACTCAGATAGAACAAAATTCCAATCCATTGGCAGTCGCCAGTGACAAAACTGAACCTGTTGGTGATCAACAAACTGTTCATCCTGGTCGCCTGCAGTGTCCAGTATGCTCAAAGCGCTTCAAAGCCAAGAACCTGCTGGAGGGCCACATGGTGTCTCACAGCGACGCTCGGCCCCACCAGTGCGACATCTGCCAGAAGAGCTTCAAGCGCACCAACACCCTGGCTGTCCATCGTCGCATCCATACCCGGGAGCGCAACTACATCTGCGACGTATGTGGCCGTAGCTTCGTCCAGGCGACCCAGTTGACCAGCCACCGGCGACGCCACTTCGACAGATACACGCGCCACTGCAGCGTCTGTAACAAGGGATTCTTCACCAATGCCGATCTCCGCTGCCACATGAACGTGAAGCACGCAGCGAAGGAGCACGTCTGCAAGGTCTGCGCCAAGTCATTTCCCAACGGTCACACGCTGGCGCAACACGCGAGGACTCACGAGCCCGACTATCAGCCCACCAAGTATCAGTGCGAGTATTGCGGCAAGACCTTCGCCTACAGGAATTCCATGGTGACGCACGCCAAGTCTCACACGGGCGAGAACAAGTACGACTGTCATCTGTGCGGCAAGTCGGTCACGTCTAAAGCCTCCTTGCGAGATCATCTGAAACTGCACGGCGACGAGAAGAAGATAGTGTGCGACGTTTGCGGCAAAGCCTTCCACAAGAATTCGACTCTGGTGGTGCACAAGCGAACGCACACAGGCGAGAAGCCCTACGTGTGCGACTCCTGCGGCAAAGCCTTCACCCAGCACTCGACCCTCGTCATACACAGGAGATATCATACGGGACATAGACCCTATCAGTGTGCCACTTGCAGCAGATTCGCCCGTCCAACTCGTTATCAGTCTGCGTCGGCCATCGATATCGATATCGAGGAGACGAAAGTGGACGTGTCGCTCGTGATGCCGTCGGTTCCAGTCCCCGTGATCACCAAAAAGAAGCAGCAGATGCGCAAGCTCGAGAGCGAGCAACAACTGATCCAGCCGAAACTCGAGCCGACCCACAGCGAGGTGATACTGGACGACGATATGCCGCTGGCTTACTACTGCAGGCCCTGCAACACGTTCCTCGCCTCGCAGGACCTCCTCGACGCGCACAACTCGACCCTACACATGCCGAAGAAGAGGTACGGGTGCGCCCACTGCGATCATAGTTATCATACGACTCGCGGTCTGCGGAAACACCTCGACCAACAGCACAAGAACCCGGACGACGACGAGGctggggaggaggaggaggaggaggaggaggaggaggtagaGGAGGAGCCGCAGCAGGAGCCGGGCCCGGGAGGCTTCTACTACGAGTGCGTGCCCTGCGACAAGCTCTACCGCTTCAAGTACAGATATCTGGCTCACCTGAAAACCAGGATGCACAAGCGGACGAGGTTGGAGCACCGGAAACAGCAGCACCGCCAAGAGCCGACGAGCTTCTTCGAGTGCGAGACCTGCGGCAAACTGTTCCGCCACAAGAGCAACTACCACAAGCACCTGATGCGCCACACGGTCGGCGATCTCAACTGCAAACACTGTCCCAAACAGTTCAGGCTCTTTCGGGACCTGACGCGCCACGAGAAGACCCACTTCTCGCAGAGCTACAGGTGCACCGAGTGCGACTACGAGACGACCGTACAGGCCGCCCTCAATATACACGCGGCGCGACACATGGACAAGGCCGAGCTCCCCTACGAGTGCAACGATTGCTCCAAGAGGTTCCGCAAGCCGACCGAGCTCCAGGAGCACTACAACATACACTCGGGCGACAAGCCCTTCGCCTGTCAGATCTGCTCGACCGCCTTCTTCCTGCGCAGACAACTCTCGGCCCACTGCAGGCGACTGCATCCCGAGCTGAAGGCGAAGAAGGTGACCAGTACCGCCTGCGACATATGCGGCAGGGTACTCGCGACCAAGAGATCGCTCTTCAGGCACAAGGAGAGCCACAATCCCACGAAGCTCTACCTCTGCGACTACTGCGGCAAGAGTCTGAGCAGCGCGGAACATCTCAAGAAGCACAGACGGATACACACGGGCGAGAAGCCCTACGTGTGCGACATCTGCGGCAAGGGATTCACCGACTCGGAGAATCTCAGGATGCACAGGCGCGTCCATACGGGCGAGAAGCCCTACAAGTGCGACCAGTGCCCCAAGGCCTTTAGTCAGAGGTCGACCTTGACGATACACAGGAGGGGCCATACGGGCGAGCGGCCCTACGTCTGCAAGATCTGCCAGAGGGGATTCTCGTGCCAGGGAAACTTGACGGCGCATCAAAAGACCACCTGCGTTTAA
- Protein Sequence
- MYPEKLISVNYFVTKLTICLCLNSNRQGTKIKSPRENFPNELFTTLQFKCQCHPNTSYTCASRSKRRAAPRPQQPKCRYCSKILANQIELAVHLRIHTKKSYVCDFCGVPQISSSALSEHLGKFHKERSFGCTSCRRFFSNGRSLKLHWRSHNRQPVVKTKTTTIATTKTKKKKREVNRHVCLVCDASYSTLAYLKLHAKSHHADPPVRQSYKCDRCDYSSHYKTNVSKHASRHHSDVNRRQCGICYKSLDRTYVAMHMRIHTGEKPYGCSFCDKSFTMRKYLVLHERTHTGEKPHQCQLCGKGFAQLSPLKAHVRRHAEGGTPSAERNPLELDFIKDDIFDTQIEQNSNPLAVASDKTEPVGDQQTVHPGRLQCPVCSKRFKAKNLLEGHMVSHSDARPHQCDICQKSFKRTNTLAVHRRIHTRERNYICDVCGRSFVQATQLTSHRRRHFDRYTRHCSVCNKGFFTNADLRCHMNVKHAAKEHVCKVCAKSFPNGHTLAQHARTHEPDYQPTKYQCEYCGKTFAYRNSMVTHAKSHTGENKYDCHLCGKSVTSKASLRDHLKLHGDEKKIVCDVCGKAFHKNSTLVVHKRTHTGEKPYVCDSCGKAFTQHSTLVIHRRYHTGHRPYQCATCSRFARPTRYQSASAIDIDIEETKVDVSLVMPSVPVPVITKKKQQMRKLESEQQLIQPKLEPTHSEVILDDDMPLAYYCRPCNTFLASQDLLDAHNSTLHMPKKRYGCAHCDHSYHTTRGLRKHLDQQHKNPDDDEAGEEEEEEEEEEVEEEPQQEPGPGGFYYECVPCDKLYRFKYRYLAHLKTRMHKRTRLEHRKQQHRQEPTSFFECETCGKLFRHKSNYHKHLMRHTVGDLNCKHCPKQFRLFRDLTRHEKTHFSQSYRCTECDYETTVQAALNIHAARHMDKAELPYECNDCSKRFRKPTELQEHYNIHSGDKPFACQICSTAFFLRRQLSAHCRRLHPELKAKKVTSTACDICGRVLATKRSLFRHKESHNPTKLYLCDYCGKSLSSAEHLKKHRRIHTGEKPYVCDICGKGFTDSENLRMHRRVHTGEKPYKCDQCPKAFSQRSTLTIHRRGHTGERPYVCKICQRGFSCQGNLTAHQKTTCV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -