Basic Information

Gene Symbol
Ncor1
Assembly
GCA_900490025.1
Location
UELU01142869.1:110230-122047[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.5e-09 1.3e-05 25.9 0.0 3 43 581 621 580 624 0.96

Sequence Information

Coding Sequence
ATGAACAGTGGCCCGGCTGGCGGCCCTGGCCAGCCACCAGCGGGACTACAACCGACCTCCTCGAGCTCCAACTCCCGAGACCAGCATACGCAGCAGGGAACTGATCCAAGCGGCCTGAACATCACGATAATGAACATTACGGTGCCGCCGGTGGTGCCGGTGCCTGCGGGTCTGCGCTTCGTCCACCCATACCTGCCGCCACCCCATCCGCATCCACCTCCGCAGTCGGCAGCCTCGATGGCGCAAGTGGCCCAGGTCGCCTCCTCCAACTCCGCCTCGCCCGTCTCCGCCTCGTCCGGGCCCACGTCTATCGTCCAGCAGCAGGTCAGCAGGCATCCACCCTCGGTCCCCTCGCCTGCCTCGGTTGCTTCCAACGTCGCTGCTGCTTACACTAGGGATGTTTACCGCAACGCCAGTCCTAATATAAATGAGAGGCAAGCGATAAGCGTGAGCAGCAGTCCGGTGTCCTCGCAGGTCGTCGGTGTGGGCAGCGAGTACGTGGTGAGCGGGCGTAGCGATCGGCCGCGGATATCCCTCCTGCCTGCGCCGGCCTCGATAGCGCCCGCAGCCTCGCCGACCGCGCCCACGGATTATCACGCGGCGCGGAACAGTCGACCCGGCGCCGGTGGTCCTGGAATCTTGGCGATGCAGCCACAGGACTATCGGCCGAGTCCCGTCGACATGGCGCAAATGCAGCAAGACGCTCCCCCCTTCAAGAAAATTCGCCTCGGACAGCCCACGGACTGTCAGAGGATTACGAGCGCGCAGGACACGCTGATCAAGCAGAAGCACGTGCAACTGCAGCAGCCGCTCAGGATAGACACGAGGCCGACAGCTGGTGTTTACACGCCACAAACGGAAGCGATCTCGCCAACCCTTCCAGAGCCTAACACGCAAGAGGATGCGGCATTTAGGAGTACCAAAGACGATCTCCTTCAACAGATCGCCAAAGTTGACCGGGAAATCGCGAAAAGGGAGTCGACAATTAACAAAGTTCGGAAAAAACTTAAGGAGTTAGAAGAAGTTGCTAGCAAACCCTTGGAGCCACCCGGCACTAAGCGACCTGTGGAAGAAGCGTCACTGCAACCCAAGCATCAGTCcattgtacaaaaaatttatgCTGAAAATAGGAAAAAGGCGGAAGAAGCCCACAGGCTACTGGACAAACTGGGGCCGAAGGTTAAATTGCCACTCTACAATCAGCCCTCGGATACGACCGTCTACCAGGACAACCGTGCGAGGCATCAGTGCATGAAGGCGCGCCTCGTTGAAAGACTGCGCAAAGAGCATGCTGAACGCGCTTCCTTGAACCGCCAGCAGTCGCAGACGTACGCGATACTCGTGCAGGAGTGGCATCGCAAAGTCGAGAAGCTGGAGGCGACGCAGAAACGCAAAGCGAAGGAAGCCAAGAACCGCGAATTCTTCGAAAAGGTCTTCCCAGAACTGCGCAAGCAGCGTGAGGATAAGGAACGCTTTAACAGGGTTGGCGCGCGGATCAAGAGCGAGGCTGATCTTGAAGAGATTATGGATGGTCTACAGGAGCAGGAGGAAGAGTTGTCGACCGAGTTAAAAAATGCGTTGAAAGCTCGTCAGATGGAGGACAAGAAGATGCGTTCGTACGCGGTGATACCGCCGCTGCTGCTTGACGCGAAGCAGCGAAGAATCGCATTTCAGAATCGCAACGGTCTGCTGCAACCGGAGGAGCTCGAGGCGATGCACAGCGAGAGGAAGCTGATCAATGTCTGGAGCCAGACGGAGCACGACATGTTCAAGGAGAAGTACCTGCAGCACCCCAAGAACTTCGGAGCGATAGCCCAGTCGTTCGAGCACAAGTCCGTGGCGGACTGCGTGCATCACTACTACCTCACTAAAAAAGCGGAGAATTATAAGCAGCTACTGCGAAAGTCGAGGCGTACGCGTAGTTCTCGCAACAATCCTAACAATAAGGTAAATAATAGTAACTCCACTATCGGACCTATAGATATATTAACGACGGGAGTGACGACGAGGCTGCAGCGTGAGCAGCAACAGAAAACCCAGGAGAACCCTCAGAGTAGTGCGGCGGCGTCGAGTAGTAGTAGCAGCGCGACCACGACGACGTCGACACCAtcgaccaccaccaccaccaccaccaccacctcctcGTCATCCAATGTCACAGTGAcaagcagtagtagcagcagctccTCGATCACCACCACCGTGAcatcgtcatcgtcgtcgtcgttgtccaCCGCAGCTGCTAGTTCGTCTAGTAGCAGTGCCGCCGCCGCGGTCGCGTGCACCAGTCTCAGCGCCGAGTCCACGATGACGACGTCAACAACGACGACGATCACGTCAACGGCTTCGGCAGCAGCGTCAGCATCCGTCCCGAGTACAAGCGtcacgacgacgacgtcgagcGTACTCACGACTACCTCGACGTCGTCGGCAAGCGCCAAGGACGCCCGCGAGGCAAACAAGGAGAACAAGGAGATTAAGCAGGAGCCCAAGGATTCAATACTCCTCAAGGATATCAAGGAGGAGTCGCAGTCGAGTTCGGAGACGCTTTCCAGCAGGGAAATCAAGGTCGAAGGCAAAGGCGCCTTGTCCTCGTCATCCAACACGAGCGTTGGCAATACCAACAATGCGAGCGGTAACATCCAACACGAGCAGCAGCAAaaagacaaaaagaaaaatacaggAATCACCAGTAGCTCGAGCACCACCAGCAGGTCGAAGGACAAGAAAAAGGAAAACCACGCTGTGCCCATGGAGACCAGCGACGAAGAGGCGCAAGCCATGGACGCGATTGGTGAGTCAACACTGCTTTTTATTTACTGA
Protein Sequence
MNSGPAGGPGQPPAGLQPTSSSSNSRDQHTQQGTDPSGLNITIMNITVPPVVPVPAGLRFVHPYLPPPHPHPPPQSAASMAQVAQVASSNSASPVSASSGPTSIVQQQVSRHPPSVPSPASVASNVAAAYTRDVYRNASPNINERQAISVSSSPVSSQVVGVGSEYVVSGRSDRPRISLLPAPASIAPAASPTAPTDYHAARNSRPGAGGPGILAMQPQDYRPSPVDMAQMQQDAPPFKKIRLGQPTDCQRITSAQDTLIKQKHVQLQQPLRIDTRPTAGVYTPQTEAISPTLPEPNTQEDAAFRSTKDDLLQQIAKVDREIAKRESTINKVRKKLKELEEVASKPLEPPGTKRPVEEASLQPKHQSIVQKIYAENRKKAEEAHRLLDKLGPKVKLPLYNQPSDTTVYQDNRARHQCMKARLVERLRKEHAERASLNRQQSQTYAILVQEWHRKVEKLEATQKRKAKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEELSTELKNALKARQMEDKKMRSYAVIPPLLLDAKQRRIAFQNRNGLLQPEELEAMHSERKLINVWSQTEHDMFKEKYLQHPKNFGAIAQSFEHKSVADCVHHYYLTKKAENYKQLLRKSRRTRSSRNNPNNKVNNSNSTIGPIDILTTGVTTRLQREQQQKTQENPQSSAAASSSSSSATTTTSTPSTTTTTTTTTSSSSNVTVTSSSSSSSSITTTVTSSSSSSLSTAAASSSSSSAAAAVACTSLSAESTMTTSTTTTITSTASAAASASVPSTSVTTTTSSVLTTTSTSSASAKDAREANKENKEIKQEPKDSILLKDIKEESQSSSETLSSREIKVEGKGALSSSSNTSVGNTNNASGNIQHEQQQKDKKKNTGITSSSSTTSRSKDKKKENHAVPMETSDEEAQAMDAIGESTLLFIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00969551;
90% Identity
iTF_00969551;
80% Identity
-