Mdor024030.1
Basic Information
- Insect
- Megastigmus dorsalis
- Gene Symbol
- -
- Assembly
- GCA_900490025.1
- Location
- UELU01132824.1:1-889[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-07 0.0001 22.7 0.1 15 36 38 58 33 66 0.84 2 2 3.9 3.4e+03 -1.4 0.0 31 45 137 151 136 153 0.70
Sequence Information
- Coding Sequence
- ATGGCAGCTTCTAATAAGAATCgtgagaaaatgaaaaataccCGTAAAAAAAGTGTcacaaaagaaataaatcgTAAGAAAAATGCAAAGGGTTTTAAGGCAATAGATATGGGTATTTCTATCAGTAAAGCTGCTGCAGCGTATGGTATTCCTAAAGCCACGCTTGCTAGGAAGAAAAGCCATCCTGGGAAAGTCAAAACAAAGTCTGGACCTGATACAGTTTTATCAGCAGCTATTGAACAAGATATAGCTAATTCGATAATCTATAAAGCTGAACGAGGGCAGCCAGTTTCTAAAACTGAACTTCTAGATTCTGTACAATTGTATGTAAAGGCGAAAGGAATAAATGCACCATTTATTGCTGATCGTCCTGGTCGGCACTGGTATGAGGGGTTCAGAAAACGTCATCCTAGTTTGAGCATGAGAAAACCGCAGCATTTGAGTCTCAGTAGGGCAGGAGTTGCTAGAGAAGATTTGCAAGAGTGTATTTTATTATGTCCAGATTCAGATAAAGTATTGACTTCAAAAGGTACTCGTGCAGCTTATAAAGTAGTAGATGCAGGTAAGGAGTGTCTCACTGTTCTGTTTATGTACAGTGCAGATGGTACTCGTGCTCCACCCATGCTGATGTTTGCGTATAAAGAAGGAGTACCAAAAAATATTGCTGAGAAAACACCAACACATTGGGGAATCG
- Protein Sequence
- MAASNKNREKMKNTRKKSVTKEINRKKNAKGFKAIDMGISISKAAAAYGIPKATLARKKSHPGKVKTKSGPDTVLSAAIEQDIANSIIYKAERGQPVSKTELLDSVQLYVKAKGINAPFIADRPGRHWYEGFRKRHPSLSMRKPQHLSLSRAGVAREDLQECILLCPDSDKVLTSKGTRAAYKVVDAGKECLTVLFMYSADGTRAPPMLMFAYKEGVPKNIAEKTPTHWGI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -