Mdor018535.1
Basic Information
- Insect
- Megastigmus dorsalis
- Gene Symbol
- -
- Assembly
- GCA_900490025.1
- Location
- UELU01144104.1:1-860[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-10 7.9e-07 29.5 0.0 6 36 50 79 45 87 0.87 2 2 5.6 4.8e+03 -1.9 0.0 30 45 157 172 157 173 0.74
Sequence Information
- Coding Sequence
- atgaaaaataccCGTAAAGAAAGTGTcacaaaagaaataaatcgTAAGAAAAATGCAAAGGGTTTTAAGATTACAAGAAAAACGATCTTATTAGTTAagcatacaaaaaaaattcataaaaggaAGAATTATTCATCTGAAAGCGTTGAGAATGCCTTAAAGGCAATAGATACGGGTATTTCTATCAGTAAAGCTGCTGCAGCGTATGGTATTCCTAAAGACACGCTTGCTAGGAAGAAAAGCCATCCTGGGAAAGTCAAAACACAGTCTGGACCTGATACAGTTTTATCAGCAGCTATTGAACAAGATATAGCTAATTGGATAATCTATAAAGCTGAACGAGGGCAGCCAGTTTCTAAAACTGAACTTCTAGATTCTGTACAATTGTATGTAAAGGCGAAAGGGATAAATACACCATTTATTGCTGATCGTCCTGGTCGGCACTGGTATGAGGGGTTCAGAAAACGTCATCCTAGTTTGAGCATGAGAAAACCGCAGCATTTGAGTCTCAGTAGGGCAGGAGTTGCTAGAGAAGATTTGCAAGAGTGGTTtatcgaacaaaaaaaatatttagaaaagaAGGATCTATTGCACATTTCTCCCAGCAGAATTTTTAATTGCGACGAatccaatattttattatgtccAGATTCAGATAAAGTATTGACTTCAAAAGGTACTCATGCAGTTTATAAAGTAGTAGATGCAGGTAAGGAGTGTCTCACTGTTCTGTTTATGTACAGTGCAGATGGTACTCGTGCTCCACCCATGCTGATGTTTGCGTATAAAGAAGGAGTACCAAAAAATATTGCTGAGAAAACACCAACACATTGGGGAATCGGTATCTCAGAGACTGGCTG
- Protein Sequence
- MKNTRKESVTKEINRKKNAKGFKITRKTILLVKHTKKIHKRKNYSSESVENALKAIDTGISISKAAAAYGIPKDTLARKKSHPGKVKTQSGPDTVLSAAIEQDIANWIIYKAERGQPVSKTELLDSVQLYVKAKGINTPFIADRPGRHWYEGFRKRHPSLSMRKPQHLSLSRAGVAREDLQEWFIEQKKYLEKKDLLHISPSRIFNCDESNILLCPDSDKVLTSKGTHAVYKVVDAGKECLTVLFMYSADGTRAPPMLMFAYKEGVPKNIAEKTPTHWGIGISETG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -