Malb003475.1
Basic Information
- Insect
- Meganola albula
- Gene Symbol
- -
- Assembly
- GCA_936440415.1
- Location
- CAKZFH010000041.1:455788-463453[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1.1 84 4.0 0.8 1 23 54 77 54 77 0.95 2 21 0.039 3 8.6 0.6 1 23 84 107 84 107 0.97 3 21 3.6 2.8e+02 2.4 3.9 1 23 188 210 188 210 0.96 4 21 0.00057 0.044 14.4 0.8 2 23 216 237 215 237 0.97 5 21 2.4 1.9e+02 2.9 1.3 1 23 243 265 243 266 0.93 6 21 0.18 14 6.5 3.2 2 21 510 529 509 530 0.94 7 21 0.064 5 7.9 2.6 1 23 627 649 627 649 0.95 8 21 0.39 30 5.4 0.3 2 23 785 806 784 806 0.96 9 21 0.0038 0.29 11.8 0.4 2 23 885 906 884 906 0.96 10 21 0.009 0.7 10.6 0.6 1 23 914 936 914 936 0.98 11 21 0.064 5 7.9 3.5 1 23 972 994 972 994 0.95 12 21 0.00018 0.014 15.9 4.0 1 23 1002 1024 1002 1024 0.99 13 21 1 77 4.1 3.3 1 23 1108 1130 1108 1130 0.95 14 21 0.15 12 6.7 2.0 1 23 1180 1202 1180 1202 0.94 15 21 0.43 34 5.3 0.0 2 23 1209 1230 1208 1230 0.96 16 21 0.27 20 6.0 1.6 1 23 1287 1309 1287 1309 0.93 17 21 0.00081 0.062 13.9 1.3 1 23 1315 1337 1315 1337 0.96 18 21 0.005 0.39 11.4 2.6 1 23 1427 1449 1427 1449 0.97 19 21 0.00013 0.0097 16.4 1.4 1 23 1455 1477 1455 1477 0.99 20 21 0.052 4 8.2 1.4 2 23 1567 1588 1566 1588 0.97 21 21 0.01 0.78 10.4 2.8 1 23 1599 1621 1599 1621 0.98
Sequence Information
- Coding Sequence
- ATGCTACAGCAGATGTCCTCGCCGCCGAGCGCGCACGTCGGCGAGGTCGCAACTATCGTGCGCCAGCTCGAAGGCCGCGCTTGCGGCGACGTGTCGTGGGAAGCCACGTCCGAGGCTGCGGAAGATACTGAATTACCACAGTGCAAGATTAGAAGGAACTACAATTGCACTAAGTGCACGTTTTTTACACAGAACCCGCGCGCTTATGTCGTGCATACAAGGGACGCACATTTTGTAAAACTCAAGATATTTGATTGTCCGTACTGCATTTACGCGTCGAGATATCGTCAAAAACTTATCAGACACTTGAAGACGGTCCACAGTAGATCTAAGATGTCGACCGTGAAGTTGGATCCAGAGTCGTCGCCGCCATCTGATAACATAGACGTTGAACAATCTGAGCGAATGGAAGACTTACTCGAGGAAGTCGAAGATTATGACGATATTATGGAGCTCGACGAAGACGACTTGCCTGAGCGCTTTGATGATGTGACGGAGCAGAGTGACCGAAACATTGAGCGAGGTACACCCTCTTCTTCCTCCAAAGCAAAGGGAAAGTATTTTTCCTGTGAAAAGTGTAACTATGTTACACACATAAGAGCGAGATTCACAAAACACGTCAAATATCATTCGATGCCTATGATCAAGTGCACAATTTGTGATTTTCGAACTCCTTATAAATGGAACTTAGATCGTCATATGAAAAATCACGGTGGAAGTGGGAGTTTCAATTGTTCTATGTGTAACTTTACCGCGGATATCAGACAAAGTTTGACGGTGCACGAAATGAATCACCACACGCCGACCGCAGGTCACACTCCGGCAAGTCGCCGTCGTAACCGGGTGGGTGCTAGTGACACGGTGCTCGCAGATAGCGACTCGTCTGCCTTACTCAGCAAGAAGGAAGAAGCGTGCAGCGATTCGCGCTCTTCACATTCGGTCTCGGACATGGGTCTACAATACGCAGAACGGGAGTTAATTAGCTGTAAAAGTGATTCAAACGATGCTTCATCATCTGAGTTTACAAAGGACACTTCACCAATGACACCCGACATGAACAACCAACATTCACCTAACCACAACACCGACGAGACAAAGTCACAAAAACAAAGCAGGAAAATACCTAGACCTATACCACCTCTTATACCGCTAAATTCTTCAACTCCCAATCAAAAACAAACATCGTCTGGTGAACCACCAATCAAAAAATTCAAAGAATCTCACAACGAAGATTTAGACTTTAATTCTGGAAACAATAGAATAGAAAACTTATCAGATGACATCACTATAATACCTATTAGTAATACAGCACCTAAAGAAATTGTAAACCGGAAGAAAAACGAATCATTTTTTGACAGATTAAAAGAAAGATTGTTAACAGAGACTGGCGAAGAAGGTTCACTGAAATGTAAGAATTGCGGTTTTGAAAGCAAATGCTTGTCAGAACACTCTGTGCACGAAAAAACATGTGTTCCGCAATCTAATCGAGTGCAAACAAATACCTCAATTTCAAGTTTAGGTTCGACAAGATGCCAAAATTGTAGACATAGATGTAAATCAAGTGCTGACTTATATGTTCACATGCAATCTTGTGGTAAACCCGAGAAGATCAGTAGAGAAAATGACTCGATCACGATGGGTCAGAACCCCGAAATGACGAATACTATGGAAAAAGACACTGAGCCTCATCCTATGGAAAATGTTGTATTTGTTTGGAATAACATAAACCAAGACTCTGAAAAGTTTGATATGCCGTTAGGTGTAAATATCAACGATGACCGTACTATGCCAGCAGTAAACAGAAGCTTTGAAACGGAGTTAGTAGATGACAATGATACTATGAATATGTCTCCAAGTCAAGCAGTGGGAAGAAAGGTATTCAAATGCCCACATTGTCCATTTTTCTCTACAACTGCATCGAGATTTCACGTGCACATTGTAGGACACTTAAACAAGAAGCCTTTTGAGTGTTCGCTTTGCAAGTATAAATCTAATTGGAGATGGGATATTACGAAACACATTAAACTTAAGTCCGCAAGAGATCCAGAGCATAACGAGGCTAAAGTTTTGATGACTGATGAAACGGGTAGAAGAAATTACAGCAAATATAACAAATTTATGGCTATGCCCATTCCTAATGAAAATGGTGAAAATGAATTTCAGTATTTAGACCCTAACACATTACTAGATAGCTCGATGGACATTGAAGAGTCGTACAACGATAACACGTCTGATGTAATAAACGTACAATTTGAAACGCCACTCAATTTACAGACTCAGCTCAATGATAATAAGTACGACTTCATCGATAACAACAGCCTTGATATGAAGAAACCGAAGAAAACATTATGGAAATGCAAAAAATGCAATTACAGGGATCCATCCAAGGAAGCCCTGCTGGAGCATGTTCGCGAACACTCAAGACAAGATGGTTGCCAAGAAGACGGAAACAAAACACAGGCAAAGAAGCCTGAAAATGCTCCCGACCCGGCAGACCTGGCTTATAGATGCGGACATTGCAATCAACTATCTAATTGGAAACATGTGATACAGCGCCATTGCCGTTTGAAGCACGAAGGAATAATAAAAGTAATAACTACACTGAAACCTAAACCTGACATAGGAATGAATTTGAATGACATCACAACCGACATGTGTAACAAGTGCCCCTTCAGGTCAAGCGACAAAGAACAACTTCTTGCCCATTTACAACAACATCAGCCATCGCCAGAATCAATATTTAAGTGCTACTTTTGTCCTTTCTTTGTCAAAAACGAATCGGAATTAGTGCAACATCTTTTAGTACATGGCATAACTGACCCAGAGGAATATATTGCAAACGCAATGGGAAAACAATCACCAACCCCCGAACATCAAGGAACTCCTAACTCCACAAGCAGTTCCACGAAGCGTCATAAATGTACGGATTGCCCGTACGAAACAAACAGCAAGTCACAATACATGTATCACGAACAATTCCATCGCCTACCAGCAGATACCCCGTATAAATGCCCAGAATGTAATTACAGTGTCTCTAAAAGACACCTTTTGCACCAGCACTTGAGAGTACACGGCATTGTTGGCAAAAAGAATGAATCAGAAGCAGATCTTGAAGCTGCCAGTAGCTCACAACATAAAGATGGTAATCTAAACTTCAACGTAAACTTAGACGAAATTCCGTATGTTTGGGTGTCCGCAAAGAATGAGTTCCATAAAATGTTTAAATGCCGCTATTGTTCTTATGTGAATTCTCAAAAATGTAAAATTCCTAATCATGAAAAAATACACTGTATCATATCTGAAAACAATGATACAATTATTTATAAGTGTCTCGAATGCAAATTAACTTGTGATCATCCAGGTAGACTAGCTGAACATTCCAAATTTCATGGTGAGATATATGGGCGTATTTATTGCCCGGTCGAAGACGATGTACCAGATGAAGAACAAATTAATAAATTAAGAAAAGTTATAGAAATGGACAAATTGAATATGGAGACGGGAGAATATATTGAAAATAGAGAAGTAAAATTATTATATTTTTGTCACAAATGCCCAGCAAGATTTCATGAGGAAGTTGAATTGCAAGCACACGAGACACAGCATAGCTCGACATATCTAAATAAATGTACCATTTGTGAATTTTCGGTACCTGAAGAAAACGAATTAGAAGCACATGTTTTTGTTCACACTGATGAATATAATACTAAAACGAAAATTCTTAAATTTATACATAAAACGCATCCACAGCATACACAACCCTTTTTAGAAATGTCTCAATTCCCATCTAGTTCAGAAGTTATGTGGACTGTGGGAAATCCAAGCAAAGTAGAAAATATGGAAAAAACTCAAAGACAATATGCTTGTAAACAATGCCCTGCAAAGTTTTTCAAAAGTTCAAGGTACAAATATCATTTAGGATTACATGGAGGAGAAGGCGATCATAAGTGTCCAGATTGTAACTACACAGTCAGAAATATTCAGAATCTAGCTAAGCATAAATTATTGCATGAAAACGATAGCAAGACAACTAACTGTGATTATGAATCGGGAGACGACATGGACTTCAAAAATATCCCATTATCAGGAACAGATCTTTTCCAAAGAAAGACTGAAGCTCAGAAGAGAGTGTTAATAGATAAAGACAAATTAGTAAAACCAAATGATCATTTTCCTCCTGTTTTACAAGCAGACCCACAGTTTGGATTTTTAATGCATGGAAATCCTGAATTCATATATCCCACATATTTGAAGAATGGTCGTCAAAAAGAAAAACGCTACAAATGCCACAAATGCCCTTCGGCTTTTGAGAAAAGAGAGCAATATAAGATTCATCTATCGTTGCATGGCTCCAAACAGAGATACAAATGTGAACTGTGTGATTATTCAGTGAAATATTATGCAAATTACGTACAACACATGAGAAAACATCAAATGAATGATGAAGCCCAAGCTGAAAGAAAGAAGGATAACAGTGGCTATGTAGATTCAGAAAACCAAGACGTTAAGCAAGAGAATAAGGACAACATAAAACTGGCTATCAAGACAATGCCAAAGGGAATACCTAAAAGCGACTTCCAACAGTTTTCTATTAGTGACCAACAAACTTTGAAACTTCTACAGAGAGGTCGATCAATTAACTGCACAGGGAAAGATGCAGTTGCAGAAACTTCTCCTACAAAAGAACGTAAAATTCTAAAGTGTCTTATGTGCCCCTACACCAACCAACGACAAGACTCTTTAAATAACCATTATAGAAGACATGGTGAACCTGACATCCATAGTGGGGGAAGTCACGAATGTTCATTTTGTGATTTAGTCGTTGTTCAATCACATTTTCTTCGGGAACATTTAAAAACCCATTTTAACTTTCATAAAACTTTAGTTCCTGAATGTTTCGTGGCAAATGAAGATGTTACATTTACTATTACAAAACTGGATGAAGATTCTGTGCCTATAGATCTCAAATTAGATGTGAATAACAAAGCGTTAACATGTAATGATGATAAAATTTATGTAAAAATTAAAACAGGAGAAGTAGTTGTAGATTAA
- Protein Sequence
- MLQQMSSPPSAHVGEVATIVRQLEGRACGDVSWEATSEAAEDTELPQCKIRRNYNCTKCTFFTQNPRAYVVHTRDAHFVKLKIFDCPYCIYASRYRQKLIRHLKTVHSRSKMSTVKLDPESSPPSDNIDVEQSERMEDLLEEVEDYDDIMELDEDDLPERFDDVTEQSDRNIERGTPSSSSKAKGKYFSCEKCNYVTHIRARFTKHVKYHSMPMIKCTICDFRTPYKWNLDRHMKNHGGSGSFNCSMCNFTADIRQSLTVHEMNHHTPTAGHTPASRRRNRVGASDTVLADSDSSALLSKKEEACSDSRSSHSVSDMGLQYAERELISCKSDSNDASSSEFTKDTSPMTPDMNNQHSPNHNTDETKSQKQSRKIPRPIPPLIPLNSSTPNQKQTSSGEPPIKKFKESHNEDLDFNSGNNRIENLSDDITIIPISNTAPKEIVNRKKNESFFDRLKERLLTETGEEGSLKCKNCGFESKCLSEHSVHEKTCVPQSNRVQTNTSISSLGSTRCQNCRHRCKSSADLYVHMQSCGKPEKISRENDSITMGQNPEMTNTMEKDTEPHPMENVVFVWNNINQDSEKFDMPLGVNINDDRTMPAVNRSFETELVDDNDTMNMSPSQAVGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFMAMPIPNENGENEFQYLDPNTLLDSSMDIEESYNDNTSDVINVQFETPLNLQTQLNDNKYDFIDNNSLDMKKPKKTLWKCKKCNYRDPSKEALLEHVREHSRQDGCQEDGNKTQAKKPENAPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHEGIIKVITTLKPKPDIGMNLNDITTDMCNKCPFRSSDKEQLLAHLQQHQPSPESIFKCYFCPFFVKNESELVQHLLVHGITDPEEYIANAMGKQSPTPEHQGTPNSTSSSTKRHKCTDCPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIVGKKNESEADLEAASSSQHKDGNLNFNVNLDEIPYVWVSAKNEFHKMFKCRYCSYVNSQKCKIPNHEKIHCIISENNDTIIYKCLECKLTCDHPGRLAEHSKFHGEIYGRIYCPVEDDVPDEEQINKLRKVIEMDKLNMETGEYIENREVKLLYFCHKCPARFHEEVELQAHETQHSSTYLNKCTICEFSVPEENELEAHVFVHTDEYNTKTKILKFIHKTHPQHTQPFLEMSQFPSSSEVMWTVGNPSKVENMEKTQRQYACKQCPAKFFKSSRYKYHLGLHGGEGDHKCPDCNYTVRNIQNLAKHKLLHENDSKTTNCDYESGDDMDFKNIPLSGTDLFQRKTEAQKRVLIDKDKLVKPNDHFPPVLQADPQFGFLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKDNSGYVDSENQDVKQENKDNIKLAIKTMPKGIPKSDFQQFSISDQQTLKLLQRGRSINCTGKDAVAETSPTKERKILKCLMCPYTNQRQDSLNNHYRRHGEPDIHSGGSHECSFCDLVVVQSHFLREHLKTHFNFHKTLVPECFVANEDVTFTITKLDEDSVPIDLKLDVNNKALTCNDDKIYVKIKTGEVVVD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -