Malb007224.1
Basic Information
- Insect
- Meganola albula
- Gene Symbol
- ZNF341
- Assembly
- GCA_936440415.1
- Location
- CAKZFH010000080.1:500672-502571[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0084 0.65 10.7 1.5 2 23 155 177 154 177 0.95 2 10 1.4 1.1e+02 3.7 0.6 1 20 180 199 180 201 0.89 3 10 0.0016 0.12 12.9 1.5 1 23 203 225 203 225 0.98 4 10 0.0002 0.016 15.8 3.7 1 23 228 250 228 250 0.97 5 10 0.0011 0.082 13.5 1.0 2 20 255 273 254 275 0.92 6 10 0.0004 0.031 14.8 0.7 1 23 294 317 294 317 0.92 7 10 1.2e-05 0.0009 19.7 1.4 1 23 323 345 323 345 0.97 8 10 3.3e-06 0.00025 21.4 2.3 1 23 351 373 351 373 0.99 9 10 0.00043 0.034 14.7 0.6 1 23 379 402 379 402 0.95 10 10 0.00017 0.013 16.0 5.5 1 23 407 429 407 429 0.95
Sequence Information
- Coding Sequence
- ATGGTTGAAGAATCACATTTAAACTTACTTTTATCTAATATCCTGGGTGGAAATCGTTACAGCCACTGCAGGATTTGTTTAGAATTGATTTCGGAAAGCTACGTTCGATTTAAGGATTTGCTATCGCTCGATGACTCCAACCATACATTTACAGAGGTGACTGAAATGGCTTCATCAATATTAGGAGCAGATATTTGCGAAGAAATAGCAGGAATTGATGGGATATGCAAAGAATGTTATGAAGAAGTACTTAACATTATCAAATTCAAGGAAAAATGCAACAATTCTACTCAACTCCTTCACAACTTATTTGATAACCTTTCTAACCAACTTACCACTGTGAATCTTGGTACCCTTGATTCAGATTCTAATTTATATGTCAGTGTCAATGAACATAAGGCTCAACTGATTTTCATTGGGAAAAAAATTGCTAAAAATAATACTGTAGCTGATAAAAACCTGCACTGCTCCAATTGTTTTCAAAAATTTACAGATGTAATAGATCTCAAAATGCATTACCTTACTGCTCATAAAGAATACCTGTGCACAAAATGTAACGACTCAGTCAAAGATTTTAATACACTGGCTAAACACAACAATCGTGAATATCAATGTCCAGATTGTGCAGAGTTACGTTGCACCAAAACGAGTTTACGTAAACATCAAGAAGTACACACGGCACATGTGTGTCATAATTGTGGAAAATATTTTCCTACTATCAGCAAGCTTCAGATGCATGAGCAGAAACACATTGACAAATGTGAATGCCCCAAATGTGGCAAGACTTACATCACAAAACAATTCTTTTTGAACCATGTTGAACTTTGCCTAAAGGACAAACTTGATCCACATCCACAAAGGAGTAAGATTAAGAAAACCCACATTTGTCAAGAATGTGGTAAAGGATATAGTACTTTTGGTGGTCTCAGAGTTCATAATAGATTTGTTCATGGTAGTGCAAAGCCTCATGTGTGTAATTTGTGTAATAAACAATTTACAGCCCCAAGTTATTTAAAAATGCACATGGTGACACACACACAAGAAAAGAACTTCAAATGTAATATTTGTACTAAGAAATTTGTCACAAAGGAAGCTCTGTTGTATCATACAAGAAGGCATACCGGTGAGAAACCATACAGTTGTACAATGTGTGATGAGAAATTCGTTAATAGTTCTGCAAGAGCTGAACATATAAAGTTCAAACATAAAACTCCCAGTTTTTTGTGTGAGCTTTGTTCTCGCAAATTCTTTACTCATAACAATTTGAAATCGCACATGAGGAAACATGAAGACCCTGCAAATAAATTGTATATTCACAGAAGTCATATACCAGCTAATGTGCCAGCTGTGGAAAATATGAGAGTAAAGCTTGCCGGCCAAGTTAAGTTAAAAGTGTAA
- Protein Sequence
- MVEESHLNLLLSNILGGNRYSHCRICLELISESYVRFKDLLSLDDSNHTFTEVTEMASSILGADICEEIAGIDGICKECYEEVLNIIKFKEKCNNSTQLLHNLFDNLSNQLTTVNLGTLDSDSNLYVSVNEHKAQLIFIGKKIAKNNTVADKNLHCSNCFQKFTDVIDLKMHYLTAHKEYLCTKCNDSVKDFNTLAKHNNREYQCPDCAELRCTKTSLRKHQEVHTAHVCHNCGKYFPTISKLQMHEQKHIDKCECPKCGKTYITKQFFLNHVELCLKDKLDPHPQRSKIKKTHICQECGKGYSTFGGLRVHNRFVHGSAKPHVCNLCNKQFTAPSYLKMHMVTHTQEKNFKCNICTKKFVTKEALLYHTRRHTGEKPYSCTMCDEKFVNSSARAEHIKFKHKTPSFLCELCSRKFFTHNNLKSHMRKHEDPANKLYIHRSHIPANVPAVENMRVKLAGQVKLKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -