Malb016531.1
Basic Information
- Insect
- Meganola albula
- Gene Symbol
- ZFY
- Assembly
- GCA_936440415.1
- Location
- CAKZFH010000252.1:45331-48439[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2.4e-05 0.0019 18.7 0.6 2 21 105 124 104 125 0.93 2 19 1 81 4.1 1.7 3 23 158 178 157 178 0.93 3 19 0.32 24 5.7 5.4 2 23 183 204 183 204 0.95 4 19 7.6 5.9e+02 1.4 6.3 1 21 207 227 207 228 0.93 5 19 0.0001 0.0078 16.7 0.1 1 23 240 263 240 263 0.95 6 19 4.8e-05 0.0037 17.7 1.8 1 23 269 291 269 291 0.98 7 19 4.9 3.8e+02 2.0 0.1 6 23 302 319 299 319 0.94 8 19 1.3 98 3.8 2.1 1 23 325 348 325 348 0.89 9 19 1.8 1.4e+02 3.3 0.0 1 12 356 367 356 371 0.85 10 19 0.001 0.08 13.5 0.9 2 21 477 496 476 497 0.94 11 19 0.0029 0.23 12.1 0.6 3 23 504 525 503 525 0.97 12 19 0.0033 0.26 11.9 0.5 2 23 531 553 531 553 0.94 13 19 6.6e-05 0.0051 17.3 0.5 2 23 559 580 558 580 0.96 14 19 0.62 48 4.8 1.2 2 20 584 602 584 604 0.91 15 19 4.5e-06 0.00034 21.0 0.6 1 23 630 653 630 653 0.94 16 19 0.00021 0.016 15.7 0.5 1 23 659 681 659 681 0.95 17 19 0.047 3.6 8.3 0.1 1 23 687 709 687 709 0.97 18 19 0.0025 0.19 12.3 0.3 1 23 715 738 715 738 0.94 19 19 8.8e-06 0.00068 20.1 1.1 2 23 745 767 744 767 0.95
Sequence Information
- Coding Sequence
- ATGGAGGTCGAATGCAGTCTCCCTCGCGCGATATGCCACTCCTGCTACGAAGACGCTCTAGCTGCAGCCACCTTCAGAAAACTTTGTTCTCAATCCAACAACCATTGGCAGGGTGCCACTGACTATCTATTCGAAATCAACGAGCCCACACACGACGACAAAGCGTTCTATTTAATTTATAACGAAGCTACAGTAAAAGACAAGTCGAGCAGAGTTCCAGACGTAAGAACAGCTCTGAAAAGACTTAATTCGAAATCCCTAAAAAAAGCTGAAAGGAAAAGCAAAATGAAAGATTTGGATTCACTTGCTTGCGCTTGTGCGGACTGCGGAAAGAAATTCTCAAGCCCCGATTATTTGAATTACCATTTGAGGAATACTTCAAACAGAGCGTGTACTATATGTGGAATAGTAATGCCTGTAAAGAAAATTGTAAAGCATCTGTATGCAGAACACAATATCAAATACGTTGACTGTAAAATTTGTCATCAGTTATTCGATAATCAACAGCTGAAACTTGAACATGAACAAAGTCATTCTAAAGGAAACACTTGCAGAATCTGCGGGAACACATATATAAACGAACGTGCCTTGCGGTCACACCATCATCATCATTCATTATTTTCCTGCAAAACTTGTAAAATTTTCTTTGAAAACATCAAATGCTTCAAATACCACAAAAAGAAATGTGTGAACATTGAGCCATCAGGATTACAGAACTTTGAGTGCAACGAATGCGGTGTTATTTATAATAGAAAGCCTTCTTTGCGCATTCATATAATTCAAAAACATTTGAATGTGCTTCCGTACGTTTGTCAGACTTGTGGGAAGCGAGCATCAACGCTAAACCATTTAAAATCCCATTTAAAAGTCCATAAAACCGAGCGAAAGGTATTTGAATGTCCTTGCGGTGCGAAGCTTCGCACTGAATTAGGTTTCCAACTCCATCAAAGAATTCATACAGGTGAAAAGCCGTACGAATGTGAACATTGTGGTGATAAATTCCTATCATCTTCTAGAAGGTTGGATCATATTAAACGACGGCATAGAGAATCGCAAGATTTTCCACATGCTTGCGAAAAGTGTGGAGCCCGATTTATCCAAGATGATCCGTTGATCCCCGTCATCACTTGCGCCGCTTGCGCAAGTGCTGCGCTAGCTGCTCACGAGTTCCGTCTCTTCGTCAATAAATCCGAGGGGTTTTGGCGCAATACCATAGACAAACTCTTCAGTCTACCCTCAGTAGACATTACTTCTGTCAAATCCATGTACGCTGTCATCGAACCGAGTGATTTATCAATGCAAACATTTAGAGACTACAGTAAAAACGACTCAAAAACAGTTCTAAATAGACTGAATAGGTTAAAATCTCGTACAACCAAAAAGTTAGTCGAAAGAAAACCTCGTGGCGGACGGACTGGACCTTCTTGCAGCTGTCCAGATTGCGGAAAAGGGTTTTTAAGTCCACATTACCTAAATTTGCATCTACGGAATAGTGGCCAAAAAGAAGCTTGTACTATTTGTGGTACAGTCTGCTTTAGAAGAGACGAAATCAAGCAGCATCTAGCTACAGTGCACAACGAAATAGTGGAAGTATGTCCCCAATGTCCTACTCTGTTCACAAATGAGGTTTTACTCAATAATCACATCGTGAAATGTCATAAACATGGTGCGTTAACTTGTGAAGACTGTGGTAGAACATTCCCTAGAAAAACCTCTTTCGATTCTCATGGTCAAATGCATGCAGTGCGAACGTGTAGGGCTTGTGGCGTACAATTTATAAATAGAAGCTGTTATAGGGAACATAGGTCTCAATGTGAGCCCAACGCGAAACCAAACGCTCAAGACGTGCCTAGAAACAGACGAACTAACATCCGAGACCCGGCTACGTTCATCTGTGATCACTGTGGTAAAACCTACAACTCTAGACCACAACTTAAAAACCATATAATTTGGATTCACATGGATATACGACCTCATCAGTGTCAATGGTGCGGAAAAAGGTTTTACACTCCCGCAAGACTGGCTGAACATACAGTGGTGCATACGCGCGTTCGAAATTTCGAATGTGACATTTGTGGCGCGAAACTCGTATCCAAAATGGCCGCTGTGTACCATAGACGAAGGCATACGGGAGAGAAACCTTATGAGTGTGAAGATTGTGGGGAGAAGTTTATTTCTGCATCAAGGAGGTCGGAACACGCTAAACGGAGGCATAACAAAGGTGTCAGGTTGCCTTGCTCTAAATGTCCAGCCACGTTTATCAGAAAACACGAACTTAAAAAGCACATGGAAAAGGCACATAAGAGTTTAAAAGATGAAGAGAATCCTATTATTGTGTGGGGATTACGGATTGATGAATGA
- Protein Sequence
- MEVECSLPRAICHSCYEDALAAATFRKLCSQSNNHWQGATDYLFEINEPTHDDKAFYLIYNEATVKDKSSRVPDVRTALKRLNSKSLKKAERKSKMKDLDSLACACADCGKKFSSPDYLNYHLRNTSNRACTICGIVMPVKKIVKHLYAEHNIKYVDCKICHQLFDNQQLKLEHEQSHSKGNTCRICGNTYINERALRSHHHHHSLFSCKTCKIFFENIKCFKYHKKKCVNIEPSGLQNFECNECGVIYNRKPSLRIHIIQKHLNVLPYVCQTCGKRASTLNHLKSHLKVHKTERKVFECPCGAKLRTELGFQLHQRIHTGEKPYECEHCGDKFLSSSRRLDHIKRRHRESQDFPHACEKCGARFIQDDPLIPVITCAACASAALAAHEFRLFVNKSEGFWRNTIDKLFSLPSVDITSVKSMYAVIEPSDLSMQTFRDYSKNDSKTVLNRLNRLKSRTTKKLVERKPRGGRTGPSCSCPDCGKGFLSPHYLNLHLRNSGQKEACTICGTVCFRRDEIKQHLATVHNEIVEVCPQCPTLFTNEVLLNNHIVKCHKHGALTCEDCGRTFPRKTSFDSHGQMHAVRTCRACGVQFINRSCYREHRSQCEPNAKPNAQDVPRNRRTNIRDPATFICDHCGKTYNSRPQLKNHIIWIHMDIRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFECDICGAKLVSKMAAVYHRRRHTGEKPYECEDCGEKFISASRRSEHAKRRHNKGVRLPCSKCPATFIRKHELKKHMEKAHKSLKDEENPIIVWGLRIDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -