Malb009539.1
Basic Information
- Insect
- Meganola albula
- Gene Symbol
- -
- Assembly
- GCA_936440415.1
- Location
- CAKZFH010000106.1:72362-80599[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.014 1.1 10.0 0.4 1 23 201 223 201 223 0.97 2 30 0.00031 0.024 15.2 0.6 2 20 251 269 250 271 0.93 3 30 0.00014 0.011 16.2 3.1 2 23 309 331 308 331 0.96 4 30 0.005 0.38 11.4 1.0 2 23 380 402 379 402 0.95 5 30 0.0021 0.16 12.6 0.1 2 23 423 444 423 444 0.95 6 30 0.00099 0.076 13.6 5.5 1 23 480 503 480 503 0.97 7 30 0.003 0.23 12.1 4.2 2 23 543 565 543 565 0.97 8 30 0.0021 0.16 12.6 0.6 1 23 615 638 615 638 0.97 9 30 0.0028 0.22 12.2 0.3 1 23 692 714 692 714 0.97 10 30 0.0061 0.47 11.1 6.8 1 23 725 747 725 747 0.98 11 30 0.32 25 5.7 0.5 2 23 759 780 758 780 0.93 12 30 0.0027 0.21 12.2 0.5 1 23 790 812 790 812 0.98 13 30 0.54 42 5.0 6.1 1 23 837 859 837 859 0.93 14 30 0.007 0.54 10.9 2.2 1 23 870 892 870 892 0.97 15 30 1.2e-05 0.00093 19.6 0.6 1 23 900 922 900 922 0.98 16 30 0.057 4.4 8.1 0.1 2 23 942 964 941 964 0.96 17 30 0.086 6.6 7.5 1.0 1 23 982 1004 982 1004 0.93 18 30 0.01 0.79 10.4 1.4 1 23 1011 1033 1011 1033 0.98 19 30 0.013 1 10.1 0.6 2 23 1044 1066 1043 1066 0.95 20 30 0.0097 0.75 10.5 0.1 2 23 1089 1110 1088 1110 0.95 21 30 2.9 2.3e+02 2.7 5.6 2 23 1153 1175 1152 1175 0.95 22 30 0.0018 0.14 12.8 0.2 2 23 1191 1212 1190 1212 0.95 23 30 0.18 14 6.5 1.3 5 23 1222 1240 1219 1240 0.94 24 30 0.004 0.31 11.7 0.8 2 23 1251 1273 1250 1273 0.95 25 30 0.52 40 5.0 3.6 2 23 1290 1308 1290 1308 0.89 26 30 4.7 3.7e+02 2.0 1.2 2 21 1312 1331 1312 1332 0.89 27 30 0.11 8.6 7.1 0.6 2 19 1352 1369 1352 1373 0.88 28 30 0.13 10 6.9 0.5 2 23 1380 1401 1379 1401 0.93 29 30 0.00039 0.03 14.9 0.6 2 23 1412 1434 1411 1434 0.95 30 30 0.59 46 4.9 2.7 2 20 1472 1490 1471 1492 0.93
Sequence Information
- Coding Sequence
- ATGGCCCTCAAACTTGGAAAATGCAGGCTTTGCCTCAAGCTTGGCGATTTCTTCTCCATCTTCACGGTGGACAATGCGTTGCAACTCGCCGAGATGGCAATGGAATGCACCAAGGTGAAAATATACGAGGGTGATGGGCTGCCAGACAAAGTATGCTCCGAGTGTGTACAGAAGCTGAGCAGTGCGTATATTTTTAAGCAACAATGTGAGAGAGCTGACCAGGAACTGCGCCGCAACTATGTGCCGCCACCAGGGTTTAGCATCAGTCCACCACCCCCCAACAGACAGAGTAGTGACTCTGCCTTCTCCAATCACACTGACAGCTCCAACTTGACAAAACCACCGTCTTCAATAGAGGAGAAAGTGTCACCCGCTCCTAGAACTAGAAAACGTAGTATTGAAAGCGTAGGTGAAGTCTCAACTGCCGACAGTGACTATCGACCGAGCATTTCTAAGCGGATCGAAGAACTGAGGTCTACTCATAAAAGGCCCAAGCGAGATATTCCACAAAACAACTCGCAGCTAGACTCTGACTTCGATGACAACAGTATGTCTTATGCTGGCGAAACTGACTCCGACGAGCCTATCTCGAAGAATACTTTCGCTTGCAAAGTGTGTCCCAAACGCTATTTAACATACAGAAGTTTAGCAAATCACGAAAGAATTCACAAAAACAACCCGCAAGCGACAACGAAAGCAGAAACACCACAAAATAATACCGTCGACGCTCTAGATGTAGAAGATAAATTGAGCTGCAGTAAGTGCGACAAGACTTTCAAGCTGAAGATCATGTTGAAGCGTCACCAAGATGTGTGTGGCAAAGTATTACTTTCACCAGCCAAGTCGCCGCAGAAAGAGCTGGTAGTGTCGCTGGAACCCATTGACGCACCGCGACCTGACAATCATGATGTCGGTAAAAGAATCAAATGTAAAATGTGTGACAGTAATTTCAAAACTATGGACAATTTAGAGAAACACATGAAGATTTGCCACGCAGCAGCTCTTAAGAGAGACGATTTAGTACCTAATGTAAAAGTGCCAGTCCCTTGTCTGTTCTGTAAACAGATATTTGAGGATTACTACGTACATAACGCACACTTTGCGGCATGCTCAAAGAGAGACGACTCCAAACCTCTTGAGTGCCCAGTTTGTCAAAGAGTTATGACGCGCAAGAGCTCGTATTTTACGCATCTCAAAAACTTTCATTTCGAGGCTAAAGTTGCGTTCGTCAAGAAGTCGTTGGAACCGGCACTAGCCGAGACTCCCGAATGTAGAATGTGCGGAAAGAAGTTGGCGACACAAGCGCTACTTATCAAACATTTAGCCGAGCACGTCACCAGTGAGGGCGATACAGAAAATGCTGTCGATGACGACGGATGTAGCACTGCAGACGACAATACACCTGTTCATTCAGTAATAAGCAAACCCTCAACGATTTTCAAATGTCAAACTTGCGATAAAGAGTTTAAATACAAGAAATCACTCGCAACTCACGAACAGAAATGCCATTCTGAGTTGCCAGGACAGTTTGAGGTAAAAATAGAGCCTCCCGATAAAGCTTCTACTAGTTATGTGGAAGGGACTGGTGACCAGTCAGACTCTGAATCTAGTCAAGAGGAAGACAATACCTGTGATATATGTGAGAAACAGTTCTCATATCGGAGGTTATTACTACACCATAAAAAAACTAAGCACAATATGAGTTCTGGCACAAAACGGGCCAAGATTTACCTGAAAGACTGCTCAGTCCGCTGTCTGATATGTGATTTAGACATGAAAGTCAGTGCAATTAATGAACACAACCAGAAACATATATCCATGAACATGAAGCCAAGAAATGTGTATACATGTGCAGAATGCGAGGATACATTCAAAAGTTGCAGTGCTCTAGCCACACACATTAAACTGATACACAGACTGAATCAAAAGAAGATGGAGAATCTTCCAAACCCGGCGGATTTTTGTGAAGTCGTTGTGACAAAATCGGAACCCCTGGACGCGATCCAGAGTCACAACGACTTTGGTGAGGTTCCGGGCAATCAGGAGGGCAAGCCACTGATCGACCTCAGCGGCTTCACCTGCCCGATTTGCACGAAAAAGATGCCCACATTAATATCTCTAAAGCGACACGTAAACTGGCACACAAATGTCGGTAACAGCATGGAAAAGAAGTACGAGTGTTTCGTCTGCAAGGAGGCGTTCAGGTTCCGGTGCCACTACAAGGTGCACATGCGGCAGCACTACACGGACACCACGCTGGACCCGACGCTGCTGACCTGCGCGATCTGTGGCCGCCGCAGCAAGCATCTGCGCGCTGCGCAGGCGCACGCCAACTTCCACAAGCAGACGCGCTTCCAGGCCAAGGACTACCAGTGCTCCATCTGCGAGCGAGTGTTCCAGTACCGCAAGGTGTACCTCTCGCACATGGCCGTGCACTTCAAGCGCGGCGACGGCCAGAACACCGTGGTGGGCGACATACCGTCCGCGGGCGGCGGCGCGGGCGGCGACCACGCGTGTCACCTGTGCGGCAAGGCGTGCGACTCCGAGTCCTCGCTCAAGTGTCACCTGTCGTGGCATCGCTCCAAGACGTTGCTGTACGGCGCACGCCACGAGTGTCCGCTCTGCAAGCTCAAGTTCACCAACAAGCGGCGCCTCGACATGCACGTGCGCGAACATTACGAGGACGAACGGGGGCCCTACAAGTGTACCGTCTGTGGGAAGGGCTACACCGACGAAGGCTACTACCAGCGTCATCTCAAAGGACACAACTTCGACAAGCAGGTGCACAAGACTCGCATCGAGAAGTTGCGCAAGGACAAGGTGAAGTGTCCGATCTGCTCGCGATACTACCCGGACGTGGTGAAGCTGATCGGGCACCTGAAGCGCACGCACCCTGAAAGCAAAATGATCAAGACGGACCCGGACGCTCCTCCGCCGCCGCTGTTCCCCTGCAAGCTGTGCGCGCGTGTGTTCGTCGACGAGAAGCGGTTCAAGCACCACGAGGAGGCGCATCTGAGGAAACCCGAATTCTTCAAATGTAAATTCTGCGGCAAGAAGATGATCTCGCTGAAGTTGTTCAACGTCCATATCAAGGGGCATCTGACGCAGAAGTACCTGGAGGAGCCGCTGCAGTGCCCGCAGTGTCCGTCGCGCTTCGTGCGGGGCTACGACCTGCACTACCACCTGCGCGACGACCACGGGGTCACGGAGACGTGGGTGGCCGAGCGGGCCGAGCGCGTGCTGACGGGGCCGCTGGCCGACCTGCAGTGTGCCATCTGCCTCAAGGTGCTCGCCTCCAAGGGGAACTACGAGCGGCACCTCGACTACCACAACTCTCTCCGGTGCAACTACTGCTTCGATTACTTTAGCTCTCTCAGATTCTTGGAAGGTCATCTGGCTTTCTCTTGTCCCAAGAAGAAGCTCATAGGCGAAACCGAAGTTTATCCTAAGAAAATTAAATGTCACATATGCTACAAGCCGTTCCACGTCCAAGTGAAGCTCGACTGCCACCTGCGCACGCAGCACGAAATCATAATAAACCGTGAAGCTTCCGTGGGGAAGAAAGATATAGTGTGCGATTACTGCTTTAAAGTTTTCGAAAACGAGTATGCTTTGTCGACTCACAAAATATATCACCGTACTGTCGGATATTATGGTTGCATTTATTGTCCTAGAAAGTTTAACACGATGACATTATATCGCAAACATAAAAATTATCATTTTTCTCAACTAAACGTGGACAATCCTACGAAATGCGAACATTGCGATGAAACGTTCGTGCCTTTCAGAGATATGATTTACCACATGCGGGACGTGCACGGCGACGACAAAGAATGGATCGTGATGCCCAAAGAGTCAATCCAGGAGACCTGCAAGATTTGCAATAAAGTGTTTTTCAACCTGCACCGACATCTTGATTATCATGAAGAAAATAGATGTAGAAAGTGCGGCGAATACTTTTTCTCTGTACCAGACTTTGATAATCATTTGTGCTCCATAGAGAGTGATGACGAACAACCAGACATCCCTGGTCTGGAGACCCCTAAGTATGAGGAGTGCCCATTTTGTTTCAAAGCTTTCACCCGAGCGGGATCCAAGCTGAAACACGATCAGATACACAAAGGATCAGGTTCTATATCTTGCAGATTCTGTCCGCTCAAGTTTAAAACGATGGACGCATTTAACATCCACGCGTTCTCCCATCGAAGTAGAAAGTATAAAAAGAAGCCATTAAAATGTAAAATATGCGGAGAAAAGTTTGTAAAATACGGCCCTTTTATGAAACACATGAAGCAAGTGCACAAATCCAAGAAAAAGATTCACTACCGCGCTATAGTGAAGCCGGAGACTTGCGTGGTCTGTGGAGACGAGTTCCCCAACCTGCACAACCACTACCGCGCGCACTTGCTCAACCAGTGCAGCACTTGCCGAAAATATTTTACCTCCTACAAACTGTTTTCCGCACACGAATGCGACAAGGAGGACGCTGACCCCTCTAAAGTATTCACTAGTGATGCCAACTTGATTGAATTAATCAATACATACGTTCCGAAAGACGAGAAAGATGACGAGAAGTTTTATGGATACACGGATGATGAGGAGGAGGAAGATAGTAATGAGGCATTAGAGTATGAAGGTGAGGAGAGTCAGGAAAGCCAAGAGTCGAAACTTGTACCAAGATCTTTAGAAACTCCAGTAGTGTCTGATCAAGAAGAGAGATTGATGCCGATATCTATCCAGTCTCCTATAATATCTGATGTATTGTCGCTTTATAAGGAGATGAATGAGCCTTCTGCAACGAATGGAGTTGATGATGATATAGTTGATATAACTGATGACGATCCAGAGGCTAGCGAATATGTGCCTGTTGTGATTCTCCTTGATGATGATGATGATTAG
- Protein Sequence
- MALKLGKCRLCLKLGDFFSIFTVDNALQLAEMAMECTKVKIYEGDGLPDKVCSECVQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDSSNLTKPPSSIEEKVSPAPRTRKRSIESVGEVSTADSDYRPSISKRIEELRSTHKRPKRDIPQNNSQLDSDFDDNSMSYAGETDSDEPISKNTFACKVCPKRYLTYRSLANHERIHKNNPQATTKAETPQNNTVDALDVEDKLSCSKCDKTFKLKIMLKRHQDVCGKVLLSPAKSPQKELVVSLEPIDAPRPDNHDVGKRIKCKMCDSNFKTMDNLEKHMKICHAAALKRDDLVPNVKVPVPCLFCKQIFEDYYVHNAHFAACSKRDDSKPLECPVCQRVMTRKSSYFTHLKNFHFEAKVAFVKKSLEPALAETPECRMCGKKLATQALLIKHLAEHVTSEGDTENAVDDDGCSTADDNTPVHSVISKPSTIFKCQTCDKEFKYKKSLATHEQKCHSELPGQFEVKIEPPDKASTSYVEGTGDQSDSESSQEEDNTCDICEKQFSYRRLLLHHKKTKHNMSSGTKRAKIYLKDCSVRCLICDLDMKVSAINEHNQKHISMNMKPRNVYTCAECEDTFKSCSALATHIKLIHRLNQKKMENLPNPADFCEVVVTKSEPLDAIQSHNDFGEVPGNQEGKPLIDLSGFTCPICTKKMPTLISLKRHVNWHTNVGNSMEKKYECFVCKEAFRFRCHYKVHMRQHYTDTTLDPTLLTCAICGRRSKHLRAAQAHANFHKQTRFQAKDYQCSICERVFQYRKVYLSHMAVHFKRGDGQNTVVGDIPSAGGGAGGDHACHLCGKACDSESSLKCHLSWHRSKTLLYGARHECPLCKLKFTNKRRLDMHVREHYEDERGPYKCTVCGKGYTDEGYYQRHLKGHNFDKQVHKTRIEKLRKDKVKCPICSRYYPDVVKLIGHLKRTHPESKMIKTDPDAPPPPLFPCKLCARVFVDEKRFKHHEEAHLRKPEFFKCKFCGKKMISLKLFNVHIKGHLTQKYLEEPLQCPQCPSRFVRGYDLHYHLRDDHGVTETWVAERAERVLTGPLADLQCAICLKVLASKGNYERHLDYHNSLRCNYCFDYFSSLRFLEGHLAFSCPKKKLIGETEVYPKKIKCHICYKPFHVQVKLDCHLRTQHEIIINREASVGKKDIVCDYCFKVFENEYALSTHKIYHRTVGYYGCIYCPRKFNTMTLYRKHKNYHFSQLNVDNPTKCEHCDETFVPFRDMIYHMRDVHGDDKEWIVMPKESIQETCKICNKVFFNLHRHLDYHEENRCRKCGEYFFSVPDFDNHLCSIESDDEQPDIPGLETPKYEECPFCFKAFTRAGSKLKHDQIHKGSGSISCRFCPLKFKTMDAFNIHAFSHRSRKYKKKPLKCKICGEKFVKYGPFMKHMKQVHKSKKKIHYRAIVKPETCVVCGDEFPNLHNHYRAHLLNQCSTCRKYFTSYKLFSAHECDKEDADPSKVFTSDANLIELINTYVPKDEKDDEKFYGYTDDEEEEDSNEALEYEGEESQESQESKLVPRSLETPVVSDQEERLMPISIQSPIISDVLSLYKEMNEPSATNGVDDDIVDITDDDPEASEYVPVVILLDDDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -