Malb016595.1
Basic Information
- Insect
- Meganola albula
- Gene Symbol
- ZNF296
- Assembly
- GCA_936440415.1
- Location
- CAKZFH010000252.1:881261-893467[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.24 18 6.1 0.5 3 23 105 125 103 125 0.96 2 15 0.0012 0.093 13.3 2.7 1 23 276 298 276 298 0.99 3 15 1.8e-05 0.0014 19.0 0.5 1 23 304 327 304 327 0.97 4 15 0.00088 0.068 13.7 1.8 1 23 332 355 332 355 0.94 5 15 0.00011 0.0086 16.6 0.7 3 23 522 542 521 542 0.98 6 15 1.2e-05 0.00097 19.6 4.9 1 23 548 570 548 570 0.99 7 15 0.28 22 5.9 4.0 1 23 626 648 626 648 0.96 8 15 0.0015 0.12 13.0 1.4 1 23 655 677 655 677 0.97 9 15 0.0055 0.43 11.2 1.5 1 23 683 705 683 705 0.95 10 15 0.00063 0.049 14.2 2.6 1 23 711 733 711 733 0.98 11 15 0.00066 0.051 14.2 2.1 1 23 742 764 742 764 0.98 12 15 0.0007 0.054 14.1 2.1 2 23 811 832 811 832 0.97 13 15 0.013 1 10.1 4.3 1 23 849 871 849 871 0.95 14 15 1.3e-07 1e-05 25.8 0.7 1 23 877 899 877 899 0.99 15 15 1.2e-07 9.6e-06 25.9 3.1 1 23 905 928 905 928 0.98
Sequence Information
- Coding Sequence
- ATGAACCAACAATTAGATTTAGACCCTTTAAGCTCTTATGAATACCCAAATTATGGAAGTTACCCTGTATATAATCCACAGTATAATTATAATGCAAAACCTGAATTACCTTACTACAACCAAAGCACATCTAATATAACATCCATTCAAACAGACAAACACACAACACAAAACTGTAACAATAATTCTACATGTAACGATGAAGTGAAACAGGAAGTTGCAGTTGTAACGAAGAAAAACAGTAAAAAAAACGGCCAGAAGAGTACTTATTGTTCAGAGAAGATAGCTGATTCCTCGTTTCCGTTTTACGGTTGTTCCGTTTGTAATGTTAGTTACACTGCGTTACACGAATTAGACCAACATGTAACGAAGCACAAGAATAGATTAACAAGCTATAGATTAAGACTGAGAAATCAACGGAAGAAAAAGTTAATAAGAAAAGAAAAAAAGAAATTGAAAAAAATGGTAAAAGTAAAACCGGAATTAAATGTAGAAGTGGATATTAAACCGGAAGATGGTTATATTGGTAACGAAACAGCAGCTGAATATAATAACGATAATTCAGAAAATAACGGAAACACACAATACAAAATGGATTGCAGCTATCCAAATTCTGAAAATACAAATTTACTTAAAAGTGATATAAATAGTGAGAGTTCTCAATTTAACGGAAATTATTCTAATTTTAACGATAGCAGTTTAACTAATACACAATCAAATAAAACTAGATTAACGAATACTGATGATAGTATGAGTAACGGAAACGATTTAAAGGCTAAAGAGAAAAGTATGAATGAAAAAGAATTAGATAATCTAGAGAAAATATATAAATGTTTTGCTTGCCAAAAGCAATTTTCTTTGAGTTATTACTTGAAATTACATGTTAGGTCTCATACAGATGAAAAACCTTACACATGTACTGTGTGTGGACAGTCTTTTATAACTGCAAGCAAACTCGGGAGACACAACAAGAGAATTCATTTGGCCGCTCGATTTCAATGTAGGATTTGTTTCAAAATATTTTCTAGGTTCGAGTTGTTGACAGCCCATTTTGATAAGCAACATCCCGAAGACAAATTAGAAGGCGAACCTTACGATTACAATGCAATCTTGCCATATTTAAAAGAATTAGAAGAGCAACTTAGAGAGCAGGCTGAGGCCAAAGAAAAGTGTTCTACCGATGAACCCTGGCCCAGTTCTGAACCAGCGGCTGTGGATGTACCCATTGCAGACACTCCTGAAGTTAAGGCTGATACTGCTCCTGTGAACTGTGGGTATGGGTTTGTCTCAGATGACAAAAATGATTTCACCACTACAGTTAATACTGAACTAGAATCTGTTGATGTTAAAGTTAAATCTGAAGTATCCGATGATGGGGGTGATGATAGGGGTGATGGAGGTGATGATATAGGCGATGGGGGTGATGATCATCAAGCTGATGATGCTGGAGACGTGAAAGATGAGAATAGTTCCTCAGATGAAGATTATTTCCCATCAAACACATGGACAGCGCCTCCTACAATTGACCCAGAACCTATTAAAAAACGAAAGGCACCCAAAATTTGTGACATCTGTCATAAAGAAGTCAGCAGTGCTTCATATATGCGGGTTCACCTAAGGACACATACGGGAGAAAAGCCCTTTAAGTGTTATAAGTGTGGACGCGGCTTTATAACGAAGAGCAAGATGCATAGACATATGATGACTCATGAAGACAATGAAGGTGTTGTAATAAAATCAGAAGATCCCGATGTGAAAAGTGAAGCTGAGAATAATGATAATGCAGACGAAATATCTACCAAAAGCAAAAAGAAAAGGAAGTCGAAAAAGAAGAACAATGATGCAGTTCCTCCGAAAAGGTATCAAAAACGTCCGCATGCGTGTGAATATTGTAATCAAAAATTCCTTCATTTAAATATGTTAGAGATTCACAAGAAATCACATGAGGGTGAAACTCTGATACATCGATGTCACTATTGCTTAGAAGTGTTTCCGGATGCGGAAGCCGTGAAACGTCATGAAACTACCCACACTGGGCCCAAGCCGTACCTATGTACTATATGTGGAAAAGGCTACAAGAAACGGGAGACTATGGTGTACCACAAAAAATATCACAAGCCCGAGAAAGAATTTATATGTGATATCTGCTCAAAGCGATTCAATGCGTATTGTAAATTGCAAAAACATATTATAACACATAGAGCTGATAAATTTGTCTTAAGATACGAGTGTCCTGTGTGTGCGCATATGTTTAACACGAAATATCATATACAAATGCATTTGGCTACACATCAGAAGGAAGGACTGATCATGGAAGAAAATCGCAACGAAATATTAGCTATGGTACTACAGAACGCAAGAAAAATACCCAAAAATGCCGACGCACCGCCTAATTTGACAGATATTATACCGTCAGATGAAAGGTCTCGTGTATGTAATATATGCGGTGAAGTGTTTCACCATTTTTTCTATTTAGAAGAACATTTAAAAAGCCACGGATCTAAAATAGCTCTAAATGATGATATCAAGGAGGAAGAAAGGAAACACATCTGTCCAATATGCAGCAAGGGGTTCAAATTGCATTACTATTTAAAATTACACAGTTTTACACATTCGAAAGAAAAGCCGTACGTATGCCAGCAGTGTGGGAAGGGGTTTATAACTAAGGGGAAATTGAAACGGCACATGGAAACACACTCTGGGTTGAAGAAATACCAATGTCATATTTGCTACAAGTTCTTTACGAGACCTAGTTATTTGAGGATTCATATTAGAACTATTCATGGGACCCATGATAATTTTGCGTTTGATAAAAACTATTTGAACATGCAATCAATGGGGAGAATGTCGATGGGTACCGAAAATAGTGTTTAA
- Protein Sequence
- MNQQLDLDPLSSYEYPNYGSYPVYNPQYNYNAKPELPYYNQSTSNITSIQTDKHTTQNCNNNSTCNDEVKQEVAVVTKKNSKKNGQKSTYCSEKIADSSFPFYGCSVCNVSYTALHELDQHVTKHKNRLTSYRLRLRNQRKKKLIRKEKKKLKKMVKVKPELNVEVDIKPEDGYIGNETAAEYNNDNSENNGNTQYKMDCSYPNSENTNLLKSDINSESSQFNGNYSNFNDSSLTNTQSNKTRLTNTDDSMSNGNDLKAKEKSMNEKELDNLEKIYKCFACQKQFSLSYYLKLHVRSHTDEKPYTCTVCGQSFITASKLGRHNKRIHLAARFQCRICFKIFSRFELLTAHFDKQHPEDKLEGEPYDYNAILPYLKELEEQLREQAEAKEKCSTDEPWPSSEPAAVDVPIADTPEVKADTAPVNCGYGFVSDDKNDFTTTVNTELESVDVKVKSEVSDDGGDDRGDGGDDIGDGGDDHQADDAGDVKDENSSSDEDYFPSNTWTAPPTIDPEPIKKRKAPKICDICHKEVSSASYMRVHLRTHTGEKPFKCYKCGRGFITKSKMHRHMMTHEDNEGVVIKSEDPDVKSEAENNDNADEISTKSKKKRKSKKKNNDAVPPKRYQKRPHACEYCNQKFLHLNMLEIHKKSHEGETLIHRCHYCLEVFPDAEAVKRHETTHTGPKPYLCTICGKGYKKRETMVYHKKYHKPEKEFICDICSKRFNAYCKLQKHIITHRADKFVLRYECPVCAHMFNTKYHIQMHLATHQKEGLIMEENRNEILAMVLQNARKIPKNADAPPNLTDIIPSDERSRVCNICGEVFHHFFYLEEHLKSHGSKIALNDDIKEEERKHICPICSKGFKLHYYLKLHSFTHSKEKPYVCQQCGKGFITKGKLKRHMETHSGLKKYQCHICYKFFTRPSYLRIHIRTIHGTHDNFAFDKNYLNMQSMGRMSMGTENSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -