Malb009207.1
Basic Information
- Insect
- Meganola albula
- Gene Symbol
- -
- Assembly
- GCA_936440415.1
- Location
- CAKZFH010000103.1:1011050-1019642[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0065 0.5 11.0 1.0 3 23 207 228 206 228 0.94 2 23 0.2 15 6.4 0.3 1 22 613 634 613 634 0.95 3 23 6 4.6e+02 1.7 0.4 1 22 676 697 676 699 0.80 4 23 0.0077 0.6 10.8 1.7 2 22 709 729 708 729 0.93 5 23 0.04 3.1 8.5 0.4 3 23 738 759 736 759 0.90 6 23 0.0045 0.35 11.5 0.1 3 23 778 799 776 799 0.96 7 23 0.015 1.2 9.9 3.1 1 23 805 828 805 828 0.95 8 23 0.072 5.6 7.7 0.0 1 23 853 876 853 876 0.90 9 23 0.011 0.83 10.3 3.4 1 23 881 903 881 903 0.97 10 23 0.0098 0.76 10.5 0.9 1 23 909 932 909 932 0.95 11 23 0.0046 0.35 11.5 1.6 1 23 945 967 945 967 0.97 12 23 0.0001 0.0079 16.7 1.8 1 23 1017 1040 1017 1040 0.97 13 23 0.0013 0.1 13.2 1.4 1 23 1097 1120 1097 1120 0.96 14 23 0.0015 0.12 13.0 2.2 2 23 1144 1166 1143 1166 0.95 15 23 0.023 1.8 9.3 0.1 2 23 1172 1194 1171 1194 0.94 16 23 0.005 0.39 11.4 0.2 1 21 1237 1257 1237 1258 0.95 17 23 0.00024 0.019 15.5 1.0 1 23 1268 1290 1268 1290 0.93 18 23 6.4e-05 0.005 17.3 0.3 2 23 1382 1404 1382 1404 0.93 19 23 2.3e-07 1.8e-05 25.0 1.4 3 23 1411 1431 1410 1431 0.98 20 23 0.05 3.9 8.2 1.2 1 23 1450 1472 1450 1473 0.94 21 23 0.069 5.4 7.8 0.0 1 23 1495 1517 1495 1517 0.97 22 23 0.016 1.2 9.8 0.6 1 23 1523 1546 1523 1546 0.95 23 23 0.00015 0.011 16.2 0.4 1 23 1554 1577 1554 1577 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGAATTATGAACGTGTTTGTAGACTGTGCTTGTCATCTCGAGGTGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTTCTTGCCTCGAAAATCAAAGACTGTGTGTCAATTCAGATAAACGAAAATGACGATCTGCCCACAAATGTCTGCAGGAAATGTGTGGATAATGTCAACAACTGGCATATTTTTAAAAATGTATGTGAAAGGACACAAAACAAACTTCAGTCTTTGATTAGTAAAGATGGCAGCCAACTAGAAGAGGTGAATGTAAAAAGTGAGCCTTTATCTGATGAAGCATACGATGATGGAGTGCTTATTGATGGATCTTACTCTGAGAATGAGAATGTTCGGACCTCAAACAATATTCAGCCAGAAGGTCCACCAATCTTGGCGTCACTGGGACTCACACCAAGAAGTGATAAGGGAGTGGAAAGTGAGAAGGACGAAGAATATGAAGAGGAAGAGTTGAACATACCTGTTCAAAATGTCCAGAAAGTACCTCACATGCCGGAGGTATCTATCACTGTTATGCGTCCTACTGGTGAGACACTTCACGCGAAGCAAGGTATCCACCAACTCGCCTCTAAAGACTGTCTCGTCTGCGGTCGCACCTATAGGTATTCACACAATGCTCGCCGGCACGAACTCTCTGCCCACAGCTTCGATAGGTACACTAACAAAGTCACTCCCAACAAGAAATCACTACTGCCCCATCTACAACCAAAACTTAGACCGAACCCCTTCAATCCTAAAGCACGGTTGATGCCCAATCCTATTAGTCATAAGATGCAGTTCATGTCGAAAAACATGTCCGCTAAAATAGCGCCCATGAACAAGGCTGTTACTCCTCAAAAACCGATTCCAATAAAATCGGCGAAACAACATAATAATTTGCCTTACCCGTTACGCATTAAAGCACTAAAAGATCTGCAAATAAAGAAAAAAGAACCGCAAATTTTAAAGACATTGTTAACAACCAAACCAGAGGTATTGGTGTCAGAACCTGAAATATTAAATTCGGGTCCTGAGAGCCCCGAAACATTGATCTCAGAGCCAGAAATTGCGTCATTCCAAGTAGAAGCAATACTATCTGAGCCAGATGCTGAAGCATACGATCCTAACTATCTTGCCGAAGACGATGGCGATGAAATGCAAAATAATCATAGTCAAAATTATGATACGGTAGAAATGGATTCTGAGAATGAAATTGAAATCGCACGCCAACAAGCTAACGCAGAAGATGGCGATGAACAGATAGAAGGAGAAGAAAATATGAATAATCAAGATGAAAACGACATAGATGAACATCAGAGTGAAATGTCATTAGATAAAGAAGGTAATGATGATGCAGAGGGTCAAGAGTTAGACGGTGAAGACGGTGGTGAAGATAAGGTCGATAACCAAACCAAAAACGGCGAACACGAACAAGAGGAGAGTAATCACAATGAAATTGAGACAAATCATGATGAAAATGATGATGACGACGATGAAGATAATATGCCTTTAGCACCAGTAGTTGAGATCAACGAGGTTATGCAAGAGAACACCTTAAATAGCGAGACAAACGAGGATTTTGACGAGGATGATACCACCGTTGATCCTAATGATACCGTCGATGCAGAAGAAGAGGTGAAAGAATTAGACCCCAACAAAACTTATGTCACCAAAACACAAAAGGAATTCATTGGCAAATATCGGGACATTATTGAACAAATTAATACCAAACGTTGTTTGTGCTGTGATAAAGAACATCCGCGCAGAAAAGCGGTCATACAGCATTTGCAGAAAAATGGACACAAGGTTCCCAAACACACTTGCTACAATTGCGTCGTGACATTCGGCCATATTGGTGCTCTACTTAGCCACATGAGATCTAACTCGTGTACTAATTTATGGAAGATAATATACAACGAAAATGGTATCACTGATGACCTAGTTATAGAAGATGAACCCAAAGAGGTAAAAGTTCAGTATAAAGACATATTTAATGCAAGGTCGTATGCATGTAAACTGTGCCCAACTAAATATCAGTTGAAACAGTTTATAATGAAACATGTATTGGACGTTCATGAAGATGGGCAATCAAGAGTTCCCCTTAACTGTGTTCACTGCCGAGCTAGATTTAAAGAGAAAAGTTTACTAAAAAAACATGTTCGCAAAGGTGATTGTATGGTTTATATTGCCTGCGACTTGTGCTCGGAGACATTTAAGAATATGCAGCATTTCAACGACCACGCTTTAGCCGTCCACGCCGGTAGTTTCGAAGAGAATACGAGTAAATGTGTTGACGGTCGACCCACTGACTGCCCGTTGTGTGGGAAGAAAAATAGTAGCTATCCGAATTTGGTGAAACATTTGAGGATAATACACAATGAAGAAACGCCTCATCATTGCCAACATTGCGAGGCTAAGTATGAACAAGCTGCTGATCTTAACAAGCACATTTACATGGAGCATTCTGACAAAGCCTTGGGAACATCTCACGAGCCAGATATGTCGATCGTGAAAGAAGAGGCTGAAGAATATCATTATTCGTGTACGGAATGTAATGCTATATTTGAAACTGTCGACGCGTGGACCGACCATCAAGTAGCGGAACACAACCAAATTGCCCATCATTGTGATCAATGCGAAAAGAAGTTCTTAAGACCATCAGAACTGGCAGAGCATAAGAATACTCATTTGAGAGTGAAGTTCTACCCGTGTAGCATTTGCTCAAACTCTTACAGCACTCCTCAGAAGTTATCTGAACACGTACAGCACATGCATCCAGGAGCAGGTGCTGGATCCGGGGCCGAAACTGAATTCTTCTGCGACTTATGCATTAGATCTTTCAAAAGTCGCCAAGCTTATTCCAATCATATGCGTATTCACGCTAAAGTACCTACTACGAATCGGAAACCAGGAGAAGTAAATAGAGGTTTTGCACCACAAATTATTGGAAAACCCATCAAACAATTCCCCATGGTCCAAACCGGTTTTGTGCCGTTTAAGCCTAACTATAACATACCAAATGCCCCTTATTCCTGCGACATCTGTGGTAAAGGATTTATGCACAAAAAGAATATTTGGAAACACAAAAAAGTACTGCACGCAGATATACTGAATGACAGAAATGATAGTGACACGATGCAAGCTAATTCTACCGAGGAGGACGAGTTCAACCCTGACGAAAACGGTGCCATACTGTCAACGCCTCAATTTAATAGCTTTAACTTTACAAATTTCACAAACCAAATGCAACAGCCGCAGGAATCGCTATTCACATGTGAATTGTGTTCGAAACAATTCCCGCTAAAAACAAGTTTGTGGAAACATAAACGGGCTAAACATGGTATCGTAAATGTGGCCAACAACTCTGACCAGAACGCTTCGGGATCCGGGGATGGCAGTAGTAGGTCCAGCTGTACAATTTGTAGAATTACATTTACCGACAAGAAATCTTATTATCGTCATCGGAAGAATGTCCATAAGTCGACTGTTCAAATGTGTAAAATATGCGGAAAGCCTCTTAGTTCTACCTTGGAACTATACGAACATTTGAAGGCGGCTCATGCGAGAGAACTTTTGGGCTACAATGCAAACCAAGGATCCGGTAAACTACAGGATATGAAGCAAGAGGAACCTGAATATGAAAACGATCAGGAGGCTGCCGACTCCAGCGTTGACTACCAAGCTCGGTACCCATGCGATAATTGTGGTAAGCAGTTTGTTGGGCTTCTTGCGCTGCAAAACCATCAATGTATAAATCAGTCGACCTCCCAGCCTCAAACGTTCGATTGTGAGATCTGCCATAAGAGTTACACGTCGATATCGGCGTTGAAGAGTCACCGAGGATGGCATTTACGATCTCCGGACGGAAAAGCAGCTGCAAATAATTCCGGTCTTTGGATGCCTCAACACAAAGTGACTAGTAAAATAAGTAAGCATGAAGTACTCGACCCGTCCCAACTTGCTAAAGTTTCGCACACGTTAAGCGGTCCCGCGGCCGCCGTCGCCGCAAAGAGAAGACTGCCTCCTGAAGTGGAGGTGACCGTGGTCAACCCCAACAAGAAATCGCGCTCAGATGACTCTGTGGATTTCGAACAACATAATTCAAGTTCTGCCGAAGATAGATACTGTACAATATGCGACAAAGAATTTACAAAACGAGCAGCGTATCAGCGGCACATGGATGAAGTACATCAACCGAATTCCGTGTTCTGTCCCGTTTGTGACAAGAGTTTTACGAGGAAGTCGACGTTGTTGATACACATGAAGAAGCATTATGAAGGAGGTGAGGGTAGCTCGGGGGCTAACCAAGCTGAGGACGAGTTACAGTTTAATTGTGACTTGTGTGGCGCGCAGTACGATAGCGAACAATCATTAAGGTCCCACAAAGTGCGACACCACGGCGAAGAATCGGCAGATGAATCGGACGATGACGGCAACGTTCCCATCGCACCTCCCGGAGAATTCACGTGCGGGCAATGTGGTGACGGCGTCGCAACGCCGAGAGATTTGATCGCCCACCGTACTATGCACTCAACGCCCACCAAATTCTTCTGCAATATTTGCAAAGTGTACTTCGCGAGAGCGCTAGACCTATCCTCGCACACGCGGGCGAGACACGCGGACAACGAAAAGGTATTCTTCCCCTGTGCCATGTGCGACCGCTTTTATATGAATAAGAAGAGCTTACAGCGGCACATCGAGATGGCCCATTGA
- Protein Sequence
- MSVNYERVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIKDCVSIQINENDDLPTNVCRKCVDNVNNWHIFKNVCERTQNKLQSLISKDGSQLEEVNVKSEPLSDEAYDDGVLIDGSYSENENVRTSNNIQPEGPPILASLGLTPRSDKGVESEKDEEYEEEELNIPVQNVQKVPHMPEVSITVMRPTGETLHAKQGIHQLASKDCLVCGRTYRYSHNARRHELSAHSFDRYTNKVTPNKKSLLPHLQPKLRPNPFNPKARLMPNPISHKMQFMSKNMSAKIAPMNKAVTPQKPIPIKSAKQHNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILSEPDAEAYDPNYLAEDDGDEMQNNHSQNYDTVEMDSENEIEIARQQANAEDGDEQIEGEENMNNQDENDIDEHQSEMSLDKEGNDDAEGQELDGEDGGEDKVDNQTKNGEHEQEESNHNEIETNHDENDDDDDEDNMPLAPVVEINEVMQENTLNSETNEDFDEDDTTVDPNDTVDAEEEVKELDPNKTYVTKTQKEFIGKYRDIIEQINTKRCLCCDKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTNLWKIIYNENGITDDLVIEDEPKEVKVQYKDIFNARSYACKLCPTKYQLKQFIMKHVLDVHEDGQSRVPLNCVHCRARFKEKSLLKKHVRKGDCMVYIACDLCSETFKNMQHFNDHALAVHAGSFEENTSKCVDGRPTDCPLCGKKNSSYPNLVKHLRIIHNEETPHHCQHCEAKYEQAADLNKHIYMEHSDKALGTSHEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSEHVQHMHPGAGAGSGAETEFFCDLCIRSFKSRQAYSNHMRIHAKVPTTNRKPGEVNRGFAPQIIGKPIKQFPMVQTGFVPFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNDRNDSDTMQANSTEEDEFNPDENGAILSTPQFNSFNFTNFTNQMQQPQESLFTCELCSKQFPLKTSLWKHKRAKHGIVNVANNSDQNASGSGDGSSRSSCTICRITFTDKKSYYRHRKNVHKSTVQMCKICGKPLSSTLELYEHLKAAHARELLGYNANQGSGKLQDMKQEEPEYENDQEAADSSVDYQARYPCDNCGKQFVGLLALQNHQCINQSTSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVLDPSQLAKVSHTLSGPAAAVAAKRRLPPEVEVTVVNPNKKSRSDDSVDFEQHNSSSAEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYEGGEGSSGANQAEDELQFNCDLCGAQYDSEQSLRSHKVRHHGEESADESDDDGNVPIAPPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -