Malb017179.1
Basic Information
- Insect
- Meganola albula
- Gene Symbol
- -
- Assembly
- GCA_936440415.1
- Location
- CAKZFH010000274.1:249282-267998[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.94 6.2e+02 0.6 0.1 18 26 419 427 409 432 0.83 2 18 0.026 17 5.6 1.1 15 30 485 501 476 510 0.74 3 18 0.0071 4.7 7.4 2.9 6 38 505 537 501 538 0.75 4 18 0.057 38 4.5 2.9 5 33 532 556 530 566 0.81 5 18 0.0077 5.1 7.3 5.8 18 41 572 592 560 596 0.79 6 18 0.03 20 5.4 2.5 6 32 589 615 588 621 0.75 7 18 0.036 24 5.2 2.6 6 33 613 644 611 650 0.71 8 18 0.019 13 6.0 4.9 5 38 644 677 640 678 0.74 9 18 0.0026 1.7 8.8 0.7 6 38 673 705 671 708 0.83 10 18 0.16 1.1e+02 3.1 5.5 13 38 707 733 700 739 0.80 11 18 0.11 75 3.6 5.5 17 38 739 761 729 762 0.81 12 18 0.016 11 6.3 2.1 5 29 756 779 756 790 0.82 13 18 0.05 33 4.7 0.4 19 34 797 813 792 818 0.75 14 18 0.0041 2.7 8.2 2.4 5 33 812 840 810 846 0.81 15 18 0.013 8.3 6.6 1.7 13 34 847 869 838 879 0.78 16 18 0.00068 0.45 10.7 4.4 6 38 869 901 866 901 0.86 17 18 0.0072 4.7 7.4 0.7 18 38 908 929 904 929 0.90 18 18 0.85 5.6e+02 0.8 3.7 14 38 965 986 956 990 0.80
Sequence Information
- Coding Sequence
- ATGAATCAGGATCACCACAGTATGAATACGGGTGGTGGCCAGCCTCCAGGGAGCTCTGAGTCGCAGAACCAAAGAGTGCAATCTACACAGCAGCAAAGTAACTTGCCTGCTACATCATCGGCTACGGATTTACGAGTAAATTCTGCAGCTGTGAACGTCGCTTTGTCTAGTGTTGCTAAGTATTGGGTGTTTACTAATTTATTTCCCGGCCCAATACCGCAAGTGTCTGTGTATGGATTGCCAGCTGGTGCCAGGATTGAGAATGGAAAACCTGTACAGGATCTTGGGCAAGCTCATGCAAGTATATTAAATGGTGATCCTAACATCATACTTGGCCACCATGGAGGACAATCACAGGTCACTGTATCTGCTGGCGGCCAACAGATACCTGTGTCACAGATTATTGCCACTCAATCAGGACAAAGTCATGAAGCACTTGTGGCTCACACACAAGCTGAACTGGCAGCACAAGGGTCAAGCTCAAACCAGCAAGTGTCTGTCACCACTGGACAATCCACTCATCAGCAGGTGACCAATAACCGAGTGGAGTTTGTTCAACATCATAACATTGATATGAGCCATCATTCTCAACAACATATAATGCAGCAACAGCTACTGCAGGCAGCCAGAGCAGAGCAACACACTAATCAGCAGATTCAATTGACTGTAAGTGAAGATGGCATTGTTACTGTGGTTGAGCCTGCCAACACTAAACTAGTGGACAAGGAAGATTTACATGAAGCTATCAAAATGCCAGGCGACCACACCCTCACAGTCCATCAGTTGCAACAAATTGTTGGACAGCAGGTCCTTGATAGTGTGGTTCGTATTGAACAAGCTACTGGCGAGCCTGCTAACATATTGGTGACACACAATCCTGATGGAACAACATCTATAGAGGCCAGCGCGGTAGATCCGTTACTCGTCAAAGACGAAAAATGTGGTAAAATGGAAACAGCACAATATGCGATTCCTGCGGAAATAAAGGACTTAAAAGGAATCGATCTAAAGACTGTAAACGCGATGAACATGGAAGGCGCGGTGGTAAAGATATCAGCGGGCGCGAATGAACATGATCTACACGCGATGTACAAAGTCAATGTTGAAGATCTGTCACAGCTGTTAGCTTACCATGAGGTGTTTGGTAAACTCAATACAGAAGGTCAGCAACAAGCAAAGGTGATTAGTGAAGTGGAAGTGGAGGCGGGCACTAGCGCCACGATGTCGGAGGCCGAAACTTCACTCGGACATCATTCCTGTGATATATGCGGCAAAATATTCCAGTTCCGGTACCAGCTTATAGTTCATAGGCGTTACCACGGCGAAAGCAAACCATTTGCATGCCAAGTTTGCGGTTCCACATTCGCAAATCCAGCGGAACTATCGAGACATGGGAAATGTCATCTAGCTGGAGATCCAATCGAAAGGCAAACTAAGAGAGTGACACAAGACAAGCCATATGCATGCACTGTTTGCCACAAAACATTCTCTCGCAAGGAGCATCTTGACAACCATGTCCGTAGCCACACTGGCGAGACTCCATACAGATGCGAGTACTGTGCTAAAACCTTCACCCGAAAAGAGCACATGGTGAACCATGTGAGAAAACACACGGGGGAAACTCCTCACCGCTGCGATATTTGTAAAAAGAGCTTCACTAGGAAGGAGCACTTTATGAACCATGTTATGTGGCACACAGGTGAGACACCGCACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAATGAACCATATGCGGTCACACACAAACGATACTCCCTTCAGATGTGAACTTTGCGGCAAGTCCTTTACCAGAAAGGAACACTTCACCAATCACATATTATGGCATACGGGTGAAACCCCGCACCGTTGTGACTTTTGTTCAAAAACATTCACGCGTAAGGAACATTTACTTAACCACGTGCGACAACATACCGGCGAGTCGCCGCATCGCTGCAACTACTGCAGCAAGTCGTTTACCAGGCGCGAACATCTCATCAACCATGTGCGGCAACACACTGGGGAAACGCCCTTCCAGTGTGGATACTGTCCCAAAGCTTTCACTAGGAAAGACCACCTTGTGAACCATGTCCGCCAGCACACTGGGGAATCTCCACACAAGTGCTCGTTCTGCACCAAGTCTTTCACACGCAAGGAACATCTCACGAACCATGTGAGACAACACACTGGCGAGTCACCGCATCGCTGTACCTACTGCGCCAAGTCGTTCACTAGGAAAGAACACCTCACTAACCATGTCAGAAAGCACACGGGAGAAACTCCACACAAGTGCTCGTACTGCGGCCGCGCGTTCACGCGCAAGGAGCAACTGACGGCGCACGAGCGCGTGCACACCGGACACGCGCCGCACGCCTGCGCCTACTGCGCCAAGGTGTTCACGCGCAAGGAGCATCTCGCCAACCACGTGCGACAACATACGGGCGAGACTCCATTCAAATGTTCATACTGTTCGAAATCATTCTCGCGCAAGGAACATCTGACGAATCACGTGAACCTGCATACTGGTGAAACACCTCACAAGTGTCCATTCTGTACCAAGACATTCTCTAGAAAAGAACATTTGACAAATCACGTCAGGATCCACACGGGCGAGTCGCCACATCGCTGCGAGTTCTGTCAAAAGACCTTTACCCGTAAAGAACATCTGACGAACCACATGCGACAACATAACGGAGACAACGATCATTCCTGCAAAGTGTGCTCTAAGCAGTTCACTAGAAAGGATCAACTTGTCACACATATGAGGTCGCACAGTTGTGGAGAGCGACCATTCAGCTGTGGCGAATGCGGGAAATCATTCCCATTGAAAGGAAACCTGATTTTCCACGAACGGTCGCACAACAAAGCCAACGCAGCTAACAAACAATATCAATGTGAAATCTGTAATAAGGAGTTCATGTGTAAAGCGAACTTAATGTCACACCGTCGCACGCACGCGAAAGCAACCACTGAAGGTGCTACCACGGAACCGCCCGTTGAGACTGAAGACTGTTCAGATTGCACCACCACCACCACCACCACCACGCAATGTGTTAAAACTGAAGCTGACACTGCGCAAAGCGTTAAAAGTGAGGCCGAACATACAGACAGGAAAACTGATATCCGGGCTTCAGTAGAAACCAGGGTAGTTGATAGTAACATTGCACAAACACAACAAAATACAACAACTGTGATGCAAATAACCAATCAGCAGGTCCGTAGCAGCACATCCACCGCAGCCGGAGTAACAATGGGCACATTTACTCATGCCGTGAACGCTCAGCATCACACGGGAACAACCCTCGCACACCACCCCGTCACAGTCAACTACTAG
- Protein Sequence
- MNQDHHSMNTGGGQPPGSSESQNQRVQSTQQQSNLPATSSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPAGARIENGKPVQDLGQAHASILNGDPNIILGHHGGQSQVTVSAGGQQIPVSQIIATQSGQSHEALVAHTQAELAAQGSSSNQQVSVTTGQSTHQQVTNNRVEFVQHHNIDMSHHSQQHIMQQQLLQAARAEQHTNQQIQLTVSEDGIVTVVEPANTKLVDKEDLHEAIKMPGDHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASAVDPLLVKDEKCGKMETAQYAIPAEIKDLKGIDLKTVNAMNMEGAVVKISAGANEHDLHAMYKVNVEDLSQLLAYHEVFGKLNTEGQQQAKVISEVEVEAGTSATMSEAETSLGHHSCDICGKIFQFRYQLIVHRRYHGESKPFACQVCGSTFANPAELSRHGKCHLAGDPIERQTKRVTQDKPYACTVCHKTFSRKEHLDNHVRSHTGETPYRCEYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLMNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLINHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRKHTGETPHKCSYCGRAFTRKEQLTAHERVHTGHAPHACAYCAKVFTRKEHLANHVRQHTGETPFKCSYCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHMRQHNGDNDHSCKVCSKQFTRKDQLVTHMRSHSCGERPFSCGECGKSFPLKGNLIFHERSHNKANAANKQYQCEICNKEFMCKANLMSHRRTHAKATTEGATTEPPVETEDCSDCTTTTTTTTQCVKTEADTAQSVKSEAEHTDRKTDIRASVETRVVDSNIAQTQQNTTTVMQITNQQVRSSTSTAAGVTMGTFTHAVNAQHHTGTTLAHHPVTVNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01030446;
- 90% Identity
- iTF_00968228;
- 80% Identity
- iTF_00968228;