Malb009500.1
Basic Information
- Insect
- Meganola albula
- Gene Symbol
- -
- Assembly
- GCA_936440415.1
- Location
- CAKZFH010000105.1:477676-478668[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-08 8.2e-06 25.5 0.0 2 36 19 53 18 61 0.89
Sequence Information
- Coding Sequence
- ATGCCGCGTATATACAAACCTGATCCTAGGGGAAAGAGGTATAGAAAGTATGATGAAAACATAATAAATGAAGCTGTTGCCGCATATGCGAACGGCAAGTTTTCTTTAAAGGAGATAGCTGAGAAATATGATATCGATAAATCTGTACTTTATAGGCACAGTGTCAAAACTATGAAAAAACAAGGAGGGCAAACTATTTTAACAAACGAAACTGAAGAGTGCATGATTAAGTATATTAATATATGTGCGGAATGGGGATGCCCTTTAGACGCATTGGATTTGAGGTATATTGTTAAGGCCTATCTTGACCAAGTGGGCCGGACAGTGCTAAAATTTAAAAATAATTTACCAGGAACCGACTTCGTCGCGGGTTTCCTAAAACGTCATAAAAACCAAATTTCACAAAGATATAGTCAAAACATTAAGAAAAAAAGGGCAGAAGTTTCACCAAAAACGATCAAAGAGTATTTCAAGGAGTTGGGAGAGTCATTAGCAGGCATAAATGCGAGCAATATAATTAACTACGATGAAACGAATTTGACCGACGACCCAGGACGCAAAAAAATCATAACTAAACGGGGATCGAAGTATCCAGAGAGGGTAATGAATAGTTCAAAGTCTTCAATTTCATTGATTATAGCCGCTACAGCCGACGGCGTTTTACTGCCACCGTATGTGGTGTACAAGGCTCAGAATTTGTATGACACATGGACTCAAAACGGACCACCAGGAGCAAGATATAATCGCACGCAATCCGGTTGGTTTGATGCAACAATGTTTGAAGATTGGATTAAGACGATCATTATACCTCATTTCAAAGATAAACTTGGAGAAAAGGTCCTAATAGGCGATAACCTATCATCGCATTTATCAATGGAGACAATAAAACTGTGCCACGAGCAAAATATATCGTTCGTTTTTTTACCGGCGAATAGCACACATCTAACGCAGCCTCTCGATGTGGCTTTCTTCAGACCAATGAAGATAGCATAG
- Protein Sequence
- MPRIYKPDPRGKRYRKYDENIINEAVAAYANGKFSLKEIAEKYDIDKSVLYRHSVKTMKKQGGQTILTNETEECMIKYINICAEWGCPLDALDLRYIVKAYLDQVGRTVLKFKNNLPGTDFVAGFLKRHKNQISQRYSQNIKKKRAEVSPKTIKEYFKELGESLAGINASNIINYDETNLTDDPGRKKIITKRGSKYPERVMNSSKSSISLIIAATADGVLLPPYVVYKAQNLYDTWTQNGPPGARYNRTQSGWFDATMFEDWIKTIIIPHFKDKLGEKVLIGDNLSSHLSMETIKLCHEQNISFVFLPANSTHLTQPLDVAFFRPMKIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00809064;
- 90% Identity
- iTF_00809064; iTF_01093024; iTF_00012937;
- 80% Identity
- -