Basic Information

Insect: Meganola albula
Gene Symbol: -
Assembly: GCA_936440415.1
Location: CAKZFH010000243.1:315651-317274[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.7 4.2e+02 0.8 0.0 11 23 51 63 50 67 0.84

2 14 0.64 3.8e+02 1.0 0.0 11 22 79 90 78 94 0.85

3 14 0.7 4.2e+02 0.8 0.0 11 23 107 119 106 123 0.84

4 14 0.64 3.8e+02 1.0 0.0 11 22 135 146 134 150 0.85

5 14 0.7 4.2e+02 0.8 0.0 11 23 163 175 162 179 0.84

6 14 0.64 3.8e+02 1.0 0.0 11 22 191 202 190 206 0.85

7 14 0.64 3.8e+02 1.0 0.0 11 22 219 230 218 234 0.85

8 14 0.88 5.2e+02 0.5 0.0 11 22 247 258 246 262 0.85

9 14 0.64 3.8e+02 1.0 0.0 11 22 275 286 274 290 0.85

10 14 0.7 4.2e+02 0.8 0.0 11 23 303 315 302 319 0.84

11 14 0.7 4.2e+02 0.8 0.0 11 23 331 343 330 347 0.84

12 14 0.7 4.2e+02 0.8 0.0 11 23 359 371 358 375 0.84

13 14 0.51 3.1e+02 1.3 0.0 11 23 387 399 386 403 0.84

14 14 0.51 3.1e+02 1.3 0.0 11 23 415 427 414 431 0.84

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.7	4.2e+02	0.8	11	23	51	63	50	67	0.84
2	14	0.64	3.8e+02	1.0	11	22	79	90	78	94	0.85
3	14	0.7	4.2e+02	0.8	11	23	107	119	106	123	0.84
4	14	0.64	3.8e+02	1.0	11	22	135	146	134	150	0.85
5	14	0.7	4.2e+02	0.8	11	23	163	175	162	179	0.84
6	14	0.64	3.8e+02	1.0	11	22	191	202	190	206	0.85
7	14	0.64	3.8e+02	1.0	11	22	219	230	218	234	0.85
8	14	0.88	5.2e+02	0.5	11	22	247	258	246	262	0.85
9	14	0.64	3.8e+02	1.0	11	22	275	286	274	290	0.85
10	14	0.7	4.2e+02	0.8	11	23	303	315	302	319	0.84
11	14	0.7	4.2e+02	0.8	11	23	331	343	330	347	0.84
12	14	0.7	4.2e+02	0.8	11	23	359	371	358	375	0.84
13	14	0.51	3.1e+02	1.3	11	23	387	399	386	403	0.84
14	14	0.51	3.1e+02	1.3	11	23	415	427	414	431	0.84

Sequence Information

Coding Sequence: ATGAAACTTTCTGAAACATCTGCAGTTTGGCTCTGTGGTTACAAATTCAGTGACGGTAATCAGAGAAAATGTTGTTTCGGAGCTCTTTCGCTGGATCAGTCTGCTTGCGACCACGACCAGTGCAACCAGTGTCGAAAAGTATCTACGGTAGCCGTCATCAACGGAGCTCTTTCGCTGGATCAGTCTGCTTGCGACCACGACCAGTGCAACCAGTGTCGAAAAGTATCTACGGTCGCCGTCATCAACGGAGGTCTTTCGCTGGATCAGTCTGCTTGCGACCACAACCAGTGCAACCAGGGTCGAAAAGTATCTACGGTCGCCGTCATCAACGGAGCTCTTTCGCTGGATCAGTCTGCTTGCGACCACGACCAGTGCAACCAGTGTCGAAAAGTATCTACGGTCGCCGTCATCAACGGAGGTCTTTCGCTGGATCAGTCTGCTTGCGACCACAACCAGTGCAACCAGGGTCGAAAAGTATCTACGGTCGCCGTCATCAACGGAGCTCTTTCGCTGGATCAGTCTGCTTGCGACCACGACCAGTGCAACCAGTGTCGAAAAGTATCTACGGTCGCCGTCATCAACGGAGGTCTTTCGCTGGATCAGTCTGCTTGCGACCACAACCAGTGCAACCAGGGTCGAAAAGTATCTACGGTCGCCGTCATCAACGGAGGTCTTTCGCTGGATCAGTCTGCTTGCGACCACAACCAGTGCAACCAGGGTCGAAAAGTATCTACGGTCGCCGTCATCAACGGAGCTCTTTCGCTGGATCAGTCTGCTTGTGACCACAACCAGTGCAACCAGGGTCGAAAAGTATCTACGGTCGCCGTCATCAACGGAGGTCTTTCGCTGGATCAGTCTGCTTGCGACCACAACCAGTGCAACCAGGGTCGAAAAGTATCTACGGTAGCCGTCATCAACGGAGCTCTTTCGCTGGATCAGTCTGCTTGCGACCACGACCAGTGCAACCAGTGTCGAAAAGTATCTACGGTCGCCGTCATCAACGGAGCTCTTTCGCTGGATCAGTCTGCTTGCGACCACGACCAGTGCAACCAGGGTCGAAAAGTATCTACGGTCGCCGTCATCAACGGAGCTCTTTCGCTGGATCAGTCTGCTTGCGACCACGACCAGTGCAACCAGTGTCGAAAAGTATCTACGGTCGCCGTCATCAACGGAGGTCTTTCGCTGGATCAGTCTGCTTGCGACCACGACCAGTGCAACCAGTGTCGAAAAGTATCTACGGTCGCCGTCATCAACGGAGGTCTTTCGCTGGATCAGTCTGCTTGCGACCACGACCGGTGCAACCAGTGTCGAAAAGTAAAACCAAATTAA
Protein Sequence: MKLSETSAVWLCGYKFSDGNQRKCCFGALSLDQSACDHDQCNQCRKVSTVAVINGALSLDQSACDHDQCNQCRKVSTVAVINGGLSLDQSACDHNQCNQGRKVSTVAVINGALSLDQSACDHDQCNQCRKVSTVAVINGGLSLDQSACDHNQCNQGRKVSTVAVINGALSLDQSACDHDQCNQCRKVSTVAVINGGLSLDQSACDHNQCNQGRKVSTVAVINGGLSLDQSACDHNQCNQGRKVSTVAVINGALSLDQSACDHNQCNQGRKVSTVAVINGGLSLDQSACDHNQCNQGRKVSTVAVINGALSLDQSACDHDQCNQCRKVSTVAVINGALSLDQSACDHDQCNQGRKVSTVAVINGALSLDQSACDHDQCNQCRKVSTVAVINGGLSLDQSACDHDQCNQCRKVSTVAVINGGLSLDQSACDHDRCNQCRKVKPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -