Malb013462.1
Basic Information
- Insect
- Meganola albula
- Gene Symbol
- -
- Assembly
- GCA_936440415.1
- Location
- CAKZFH010000176.1:1232087-1238642[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.4e-11 3.8e-08 33.0 0.0 4 39 142 178 139 182 0.90 2 4 1.4e-12 8.1e-10 38.4 0.2 2 39 194 231 193 234 0.92 3 4 1.1e-11 6.6e-09 35.4 0.0 2 45 249 292 248 292 0.95 4 4 8.7e-17 5.2e-14 51.8 0.0 1 39 299 338 299 343 0.92
Sequence Information
- Coding Sequence
- ATGCCCGGGTACGGACGTGCGGTGAAGTGCGAGCCTCTGTCGGACGAGGAGGATAGCAATTCCTATGTGCACCCCTACGAGTATCTATCTGTGCAGGACAATGTGTTAGAGGAACTAGTCCCTCTGGCGCCAGCTGGTCCTGCGGCGACGCCAGTATGTGTGAAACAAGAGGGGGCCCACTCGCCGCCTCACACGTTAGAAACGTTGGAGCCAGCACCACACAGTACTCAGAATGTTACAATTTACAACCGGCATTTGAGTCAACAAGATGTTCCCGAGGCCACACAATTTGCGTCGCTATTAGCAGTTAAAGAAGAGCCCGCGTCCGATGTTGACCAGCAGCAGCTCAGTGGTGAAGACACAAGCGACTCTTGCGGCAGGCAGTCCTCACCGCGGCACAGTCCCAAGAGTTGGACTCAACGCGATATGGAGCGTGCCCTTGATGCACTCAGGAAACATCACATGAGTCTAACCAAGGCATCAGCAACATACGGAATTCCGTCCACAACACTTTGGCAGCGAGCACACAGGCTAGGCATAGATACGCCTAAGAAAGAAGGAGCTGCTAAATCTTGGAGCGACGCGGATCTTCGCGCGGCGCTACACGCCTTGCGGACCGGCGCTATATCTGCTAACAAAGCTAGTAAGGCGTACGGAATCCCGAGCAGCACGTTGTACAAGATAGCACGTCGCGAGGGCATCCGGCTGGCGGCGCCGTTCAACGCGGCGCCCACCGCCTGGCGCCGCGCCGACCTGGCGCGCGCGCTCACCGACATACGCGCCGGCGACACCGTGCAGCGCGCTGCCGCCGCGCACGGGATACCTACAGGAACTCTTTATGGCCGGTGTAAGCGAGAAGGCATCGAACTGTCCCGGTCCAATCCAACGCCGTGGTCGGAAGACGCCATGGGAGAAGCTTTGGAAGCGGTTAGAATGGGTCAGATGTCCATAAACCAAGCAGCAATTCACTTCAACTTACCATATTCCTCGCTGTATGGGAGATTCAAGAGATGTAAGCATCAAATGCAGGAAATTACCCACAACCAGCAGCCAGAGACCCAAGACCTGCAAAATAATGAGGCAGAGCAAGTGACCCCAGATGTTCAGTATTACCATCATTACTCCCACGACTCACACGCACACACGCACAACACAGGATACATGCACGACTCACACATCGATATGTACGGATATTACCAGAACTTCAGCAGCATTGTTACCAGATGA
- Protein Sequence
- MPGYGRAVKCEPLSDEEDSNSYVHPYEYLSVQDNVLEELVPLAPAGPAATPVCVKQEGAHSPPHTLETLEPAPHSTQNVTIYNRHLSQQDVPEATQFASLLAVKEEPASDVDQQQLSGEDTSDSCGRQSSPRHSPKSWTQRDMERALDALRKHHMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSDADLRAALHALRTGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLARALTDIRAGDTVQRAAAAHGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRMGQMSINQAAIHFNLPYSSLYGRFKRCKHQMQEITHNQQPETQDLQNNEAEQVTPDVQYYHHYSHDSHAHTHNTGYMHDSHIDMYGYYQNFSSIVTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -