Basic Information

Gene Symbol
kn
Assembly
GCA_936440415.1
Location
CAKZFH010000020.1:102863-114933[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.1e-123 3.4e-119 398.9 0.0 205 387 1 201 1 205 0.99
2 2 6.8e-07 0.0033 15.9 2.3 419 469 209 263 201 319 0.74

Sequence Information

Coding Sequence
ATGAGAAGGTTTCAGGTGGTAATATCAACACAAGTGATGGTCGACGGTCCTCTCCTAGCGATATCTGACAACATGTTCGTACACAACAACAGTAAACACGGCAGAAGAGCGAAGAGATTAGACCCTAGCGAAGGTATTGACGCCGCGACTGACAGTACTTCAGGTCTTTACCCTCCGTTACCAGTAGCGACACCTTGCATAAAGGCGATATCGCCTAGTGAAGGATGGACGTCGGGCGGCTCAACAGTTATAATAGTAGGGGACAACTTTTTTGATGGCCTGCAAGTTGTGTTCGGGACCATGCTTGTATGGAGTGAGTTGATAACATCTCACGCGATACGAGTACAAACTCCTCCCCGTCACATTCCCGGAGTAGTAGAGGTGACGCTGTCATATAAAAGCAAGCAGTTTTGTAAAGGCGCGCCTGGAAGATTTGTATACGTTTCAGCGCTCAACGAGCCTACGATAGATTACGGGTTTCAGAGGTTACAGAAACTTATACCAAGGCATCCTGGTGACCCGGAGAAGTTACCTAAGGAAATAATACTAAAACGAGCGGCAGACTTAGCAGAAGCTCTGTACTCAATGCCGCGGAACAACCAACTAGGGTTGGGCGCGCCGCGGTCGCCGCCCGCTAGTATGCCGTTCAATTCGTATACCGGACAGTTGGCGGTCAGCGTACAAGATACCGCAGCGTCGCAGTGGACTGAAGAGGAGTACGCGCGTAGCGGCGGCGGCGGGTCTGTGTCGCCGCGGTACTGCTCCGCCGCGAGCACGCCGCACGCCGCGCCCGGCGCCTACCCGCACCCGCAGCACTACCCCGCACCGCCCACATCACTATTCAATACTACCTCACTGTCTCTAGGACCGTACCACCCGTCGAACTTGAATGGACACATATCTGACCGTTATAACGCGTATAATACGAAAGATAGCGGACATTACAGTGAAAGAAATGGGAATTCTAAAAGCCTGCCCGACTGTCCGGTAAACACTCATACAAAATGCACCGACAGCGATATGAAAGGCTCTCAGAATAAAGAGAGAATGAGCGGCTTAGTATCATCACCATTCAGTGTAAACCCATTCTCATTACCAACATGCAGCGCTCAACAATACGCACAAACAGCACCATTAGCGTCTAAGTAG
Protein Sequence
MRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGIDAATDSTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGGGSVSPRYCSAASTPHAAPGAYPHPQHYPAPPTSLFNTTSLSLGPYHPSNLNGHISDRYNAYNTKDSGHYSERNGNSKSLPDCPVNTHTKCTDSDMKGSQNKERMSGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_00176893;
80% Identity
-