Basic Information

Gene Symbol
Arid2_1
Assembly
GCA_936440415.1
Location
CAKZFH010000243.1:829052-849829[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.2e-21 1.3e-17 64.0 0.0 2 89 17 101 16 101 0.94
2 2 9 1.9e+04 -3.9 0.0 38 62 1120 1144 1118 1154 0.68

Sequence Information

Coding Sequence
ATGGCAAAATCACAAGTTAATTCTAAATCTAGCAGCTATTTGAAGGATAAAGAAGCATTTTTAAAAGATTTAAAGCAGTTTAATGAGAGTAGAAATATAACTACTAAGGTGCCCATAGTTAATGGAATAGAAATAGATTTATTCCTTTTTTACACATTAGTGCAGCAGAGAGGAGGACTGAGTAAGGTAAACCAAAATGATACATGGGAAACATTTTTGAGACCACTGAAACTTCCTTACCCTTGTGTTAATGGATCCACATTGTTGAGAAGAATTTATGGTACACATTTAGAGAAATATGAGCGTGCGAAAGGCCCTCCTGGCAGAGATGATGACAATGACATGGATGAGGATCCAAGACGTACCCGTGGTGGAGGCATGCCACGCATTTCGTTTGGCGGTGGGACTTACATTTCAGCATCTGGCGAAGCGTTACGCACTGGATCCCGTATAGCAGCTGCATCGGAACGACTTGCACTCTCCCTTCTATCTCCAATGCCAAACGAACAGGACTTTGCTGTGAATGTATGCACAGTGTTAGCTGCAGACCATTCGAATAGATTACCATTGAGCTCCACACCACATATATTGGACTTTTTGTTGGCACATGCTGGGGTTTATAATCATTCGAGTCTTCGCGACACAATTGGGCGATCATATTACGAAGCCCGAGGGCGGTACCCTGACGACTTCTGGGCGATGCGAGCTGGTGGGGGTGGTGCTAAGGAACTCGCAGATGAAACAAAGTTCATGCTGCCAGGTTTCGAACAGCCCGACCTGATGGTGCAGGCCAGAGCCGCGTATAACAACTTAACTGATTGCTTGATGAACGGCTCAGAGGATGACGATATGAGTGTAGAAAAGTTTCTGGAAGATGATATTCTAGAAGACTGGGTGACAGAGCCGTCAGATGTGACGCAGCTATTTGCGCCGGAGTTGCCCGGCGGTGCATCCTGTGTTTACACGCAAAGAGTGCTACAAATTGCGTCCATAGTACGATCTTTGTCCTTCCACGAAGAAAATGTGCAATATTTAGCTAAAAGTACTACGCTTATTAGGTTTTTACTGCTCTGCGCGAACTGTTGGGTTGGCACACTGAGACAGTCTGGACTGGATACACTGGGGAATGTTTCTGCGGAACTCATTATTAAGGATCCAGCCACTTGTCTGATATCCCGTCACGTGCTATCTACCATTCAATCAGCACTGGTGTCTCAGGATCGTGCGCGAGTACTAGCAGCATTGGAATTGCTGAACAAATTAGCACAAAATGAGGCGAACGAAGACGCCCTGTTGAAAGCTTTGGAGGCTAAAGTTTACAGCGATGTTTGCAGTCTACTCACACTCCGTGATATAATGGTGTTAGTTTGTACACTAGAATGTGTGTACGCTCTGACGTCACTAGGCGACAGAGCGAGCGAGTCAGTAGCGAGAGTGCCCGGTCTGATACATACATTAGTGTCGCTTGTTACTGTCGAGGCACAAAGCTACGGTCCCCGTGCGTGTATACTGATGCGAGTAGTGGAGACGGCTCAGGTGGCAGCTAAGCCGGCAACAGAACAGCTTCAACCGACAACCTCTGGTCAGACAACAGCCACGACATCCATTGCGCCGGTCACTAACATACAACAACAACATATACAACAAACTACTGTACAGGAGAACGAACGTTTCGCCCAAGCGTGGCTCCGCTCCGCGTACGAGGCGCTGCCCGCGTCGGACAACTCCGCGAGCGAGGCGGGCGAGCTGTACCGGCTGTACGTCGCGTGCTGCACCAAGCTCGGCAGGAAGGGAGTCATAGCGCCCGCACACTTCCCACGACTCGTCAGAACTGTATTCGGTGGCACAGTGGGACCGAATACCGTAACATTGTCAACAGGCGAAACTCAACAAGTGTATATCGGTATCAGATCTAAAACTGCACAGAACAGACCTAATTCTACGGCTGGACCTTCATCGCCGATATTGAAAGCGCAGCTAACAAACAAACCTGCAACGGAAACGAAGACAGTGGTACAGCCGCAAGTACAACCTCCTCAGCCGACGACATCGCACCCGCACCTCTCTCAGGCTCTAGAGTCGAATCCATCGAACACAACACTTATAAAACATTTGTTAGCCCACAAAGTAAGCCCTGCCCTACCGCAAACGCAAGTTGCGCAAAGACAGCAAAATCAACAAAGGACTCCAGCGAGTACAGTTGTGGTGCAGTCCAATCAGGTAATGGACGTAGACCCGGAAGCTTTGATCAAATGTACTACAATCACACCTTGCGGTATTGCCAGCAGTACGCCTACTGAAAAGGTTATCATTAGCGCTCCGGAGGATTTATTGGTTCAAAAAGAGGAACCAGTACAAATACAAATAGATGAGCAAGCACAATTAACTATTAAGACGGCTCAAAACAAAATGCTAGCAGATTTACTAAAGAAAAACTCAAACCCACCCCTACAAGTAGTACAAATGGCCCCGCAAATCAGCGCTCCCACTATTCAAATTACTGAAGCAGGTCAAATCGTTCAGGTCAAACAAGATTCCACTCACCTCATACAAATAAACGACTCGGGGGTTATATCACAGAGCAACCAATATTTCCAAATAAAGAATGAACAAGGTCAACTCATTCAAATAAAGAACGATCAGGGTCAAATCATTCACTTGAAGAGTGATCAGTTACAACCTTCTTTGATTCAGTTCAAGAATGAACAAATCGTTCATAAAGATAATAAGGTTGAAAAGGAGTTGGTAGAAACTGTTGTTACGGATCATTCGTATACGGAACCGCCGGCAAAGAAAGCTAAAGTTGAAGAGAAACGAGAAAATGTACCTCAAGAAAGCGTATCTAAAACGGCAGCTAATCTGTACGCGGCGCTCGCGGCTTCTGCTTTGGAAGACGAAGATGATCTGTTGCCGCCGAAACAAGAGCAAATGGACGTGATTCAACAACCTATGCTAGTTGCTAGTGGTGGCGACAACGCTTCAGTTATCATTCAAGAACCTATATTGCAGGTTCAGCAACCATCAATGTCAGTCCAACAAATACAGCAGCCTACTTTGCAAATGCAAGCGTCGACGATACAGGTACAGCAACCGACGCTACAAATTCAACAGCCGATGCTTCAAGTGCAGCCCATGGATGTACAGAATATACTTGCTTCGCAATCCGGACAGTTGATATTACAAGAAAAGCCGATGGGTTCACAACCGACCCAGTTTATGCAGCAACCAATGCAAATTATTGCAACTCCGAGCTCATCGCAAGGTGGACTCAGTTACATTACTCAGAATCTACCCGGCAACATGATGCAGAAAACTATTATTATCGTCCAAGGACCCACCGGTGGAGGACCGTTGACTTTAACGGTAAACAACCCGGGAGGGCTGGACGAGGCGACATTAAACAGCCTTATTGCACAAGCAACAGAGGCGATAACCCAACAGCAAATTATACAGGTTACGATCAAAGCTATGCTATGCTATGGCTTAGCGTTTAACACGAGCTGA
Protein Sequence
MAKSQVNSKSSSYLKDKEAFLKDLKQFNESRNITTKVPIVNGIEIDLFLFYTLVQQRGGLSKVNQNDTWETFLRPLKLPYPCVNGSTLLRRIYGTHLEKYERAKGPPGRDDDNDMDEDPRRTRGGGMPRISFGGGTYISASGEALRTGSRIAAASERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLSSTPHILDFLLAHAGVYNHSSLRDTIGRSYYEARGRYPDDFWAMRAGGGGAKELADETKFMLPGFEQPDLMVQARAAYNNLTDCLMNGSEDDDMSVEKFLEDDILEDWVTEPSDVTQLFAPELPGGASCVYTQRVLQIASIVRSLSFHEENVQYLAKSTTLIRFLLLCANCWVGTLRQSGLDTLGNVSAELIIKDPATCLISRHVLSTIQSALVSQDRARVLAALELLNKLAQNEANEDALLKALEAKVYSDVCSLLTLRDIMVLVCTLECVYALTSLGDRASESVARVPGLIHTLVSLVTVEAQSYGPRACILMRVVETAQVAAKPATEQLQPTTSGQTTATTSIAPVTNIQQQHIQQTTVQENERFAQAWLRSAYEALPASDNSASEAGELYRLYVACCTKLGRKGVIAPAHFPRLVRTVFGGTVGPNTVTLSTGETQQVYIGIRSKTAQNRPNSTAGPSSPILKAQLTNKPATETKTVVQPQVQPPQPTTSHPHLSQALESNPSNTTLIKHLLAHKVSPALPQTQVAQRQQNQQRTPASTVVVQSNQVMDVDPEALIKCTTITPCGIASSTPTEKVIISAPEDLLVQKEEPVQIQIDEQAQLTIKTAQNKMLADLLKKNSNPPLQVVQMAPQISAPTIQITEAGQIVQVKQDSTHLIQINDSGVISQSNQYFQIKNEQGQLIQIKNDQGQIIHLKSDQLQPSLIQFKNEQIVHKDNKVEKELVETVVTDHSYTEPPAKKAKVEEKRENVPQESVSKTAANLYAALAASALEDEDDLLPPKQEQMDVIQQPMLVASGGDNASVIIQEPILQVQQPSMSVQQIQQPTLQMQASTIQVQQPTLQIQQPMLQVQPMDVQNILASQSGQLILQEKPMGSQPTQFMQQPMQIIATPSSSQGGLSYITQNLPGNMMQKTIIIVQGPTGGGPLTLTVNNPGGLDEATLNSLIAQATEAITQQQIIQVTIKAMLCYGLAFNTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-