Mdol020660.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Megamerina dolium
Gene Symbol
nfxl1
Assembly
GCA_963854835.1
Location
OY978528.1:59511178-59515098[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 3.4e+04 -8.1 6.4 15 19 174 178 173 178 0.82
2 18 0.13 2.3e+03 -0.3 0.4 4 10 209 215 208 215 0.95
3 18 1e-08 0.00018 22.4 14.5 1 18 223 239 223 240 0.98
4 18 1.3e-07 0.0022 18.9 12.5 1 19 276 295 276 295 0.97
5 18 0.53 9.1e+03 -2.3 0.7 6 10 320 324 319 324 0.91
6 18 6.2e-09 0.00011 23.1 13.8 1 19 330 348 330 348 0.99
7 18 0.92 1.6e+04 -3.0 0.5 1 7 373 378 372 380 0.49
8 18 2e-05 0.34 11.9 12.7 1 18 383 400 383 401 0.91
9 18 4.9e-07 0.0085 17.0 14.8 1 18 435 452 435 453 0.98
10 18 1.8e-08 0.00031 21.6 13.1 3 18 464 479 456 480 0.85
11 18 0.0051 88 4.2 5.7 10 18 526 534 523 535 0.91
12 18 0.0026 45 5.1 6.0 1 11 547 556 547 557 0.95
13 18 0.35 6e+03 -1.7 1.2 6 10 616 620 615 620 0.85
14 18 3.3e-06 0.057 14.4 4.5 1 11 626 636 626 637 0.96
15 18 2 3.4e+04 -4.7 2.2 15 19 650 654 650 654 0.84
16 18 0.023 4e+02 2.1 13.7 4 19 667 682 665 682 0.93
17 18 2 3.4e+04 -6.8 3.1 10 13 689 692 688 692 0.68
18 18 3.2e-07 0.0055 17.6 11.7 1 18 733 752 733 753 0.89

Sequence Information

Coding Sequence
ATGTCTGGCGCGGGAAATCCTtggaaaattaataatttaactaAAAAGCCGGTAAATCAGAATTCGCGTCAAAATGATGTAATTGCCTCAAGTCGCTTTAATGAAGTCCATGCACGAAACATAGCAGCTGCAAAAAAAGTAGTTGATAATTATTCATCTAGTTCGGAGGACGAAGAAGAATTGGATGAGAAGAAGATTATCGAATCTCTATATCAACATTATGAAGTACCAACGAATGGACAGCAGTTTTTTACCAAAACTGCAAATATTCTTGAAAATGTGTTGCATTCGGGAGCGGCTACTTGTCTAATTTGCATAGGAAGTATACGTCGGACTGAAGCCATTTGGACATGCAAgcattgttattgcttttttcATTTATCATGTATACGACGTTGGGCCAATGATAGTATTGCTCAACTGAAGTCTCAGGcaggacaacaacaacagacgGAAGGTTATTACAATAACTTCGGTGAATTTGTACCACCGAAACGAGCACGTCCTCTGCATTGGTGTTGTCCTCAATGCCGTGCAGAATATACACCTGAGGAACGGCCATCtgaatatttgtgtttttgcGGTAAAGAGGCAAATCCCACGTCTCAGTCGTGGTTAGTTCCACATTCGTGTGGAGAAATTTGTGGGAAGGAGCTTCAGCCACAGTGTGGTCATAAATGTATGCTGCTATGCCATCCAGGACCATGTCCGCCATGTGCTCAGTATGCACTTGTTGCTTGTTTATGCGGACAGTCGTCTAAGAAATCTGTACGATGCGTTGAGAAACGTTGGCAATGCGATCGAAAGTGCAAGAAGAAGTTACCATGTGGAGAACATCTTTGCAATCAACTATGTCATGCGACAGGAAGTTGCCCTCCTTGCAGTAGTACAAGCAAGCAATCTTGCGAATGTGGCAGAGAAGTAAAGAAACGAAATTGTTTCGATCTGAAGTGGCATTGTcagaatGTTTGTGGCGTATCATACTCTTGCggaattcatatatgtaaaaagGTTTGCCATTCTGGCCCTTGTGGGAATTGCCCACTTGGATTACCACGTTCCTGTCCCTGCGGCAAGACTaaaaaaattggTCCTTGCACGGAAGTAATTGATACCTGTGGCGATACCTGTCAAAAATTGCTGCCTTGCCAGCAGCATACTTGTCCCCAGCGCTGTCATCGTGGCGAATGCAATTtgtgttTGGTTATAGTAAAAAAGAAATGCCGTTGCGGCATGCGTGAGAAAGATCTACCTTGCTCAAAAGAGTTTACATGTGAtacgaaatgtaaacaaatgcgCGATTGTGGGAAGCATGCATGCAACAGGAAGTGTTGTGATGGAAACTGTTCACCTTGTGACAAAATTTGTGGCAAAATGTTGTCATGCAAAAAGCACAAGTGCCAATCAATATGTCACGAGGGACCATGCTATCCGTGTGATCGGCAATCACAGGTTAATTGCAGTTGCGGCAAAACATCTCGAAATGTTCCTTGTGGTAGAGAACGTACAGCACGTATAGTGTGTTTAGAGCTTTGTCGTTTACCATCCAAATGTCATCACGCTTCACGCCATCGCTGCCACAAAAACGAATGTCCACCGTGTAACCAAAAATGTGGCCTATCAAACGATACAACTGGTTGTGGTCACATATGCGAAGCGAAATGTCATGCAGCTGTAAAAGTGCTAAGAAAAAACGATGCAAATGGTGCATCTGCATGGACACAAACTCAAAAGtttGTATTCCAGAAAATGCCTCATCCACAATGTGAAGTGAAGATAACGGTGACTTGTATTGGTGGACATGAAGTAGCAGAATGGTCTTGCTGGAATTCGAAGCCAACATCCTGTCAACGTCCATGTAATCGGCAACTACGATGTGGTAATCATAAATGTGCTCTTGTTTGCCATGCTGTCGAAAATATTACCGACATGAAGGAACAAAAAGGTTGTGCTCCATGTCAAGAAGGCTGCAATATTCCACGACCCAATGGATGTGTACATCCATGTGCACGAGCATGCCATTTACCTCCATGTAGCCCGTGCCAAGTGATTATGAAAACGAAGTGCCACTGTGGCTTGACACAAGTTCTATATAAATGTTCGGAATTCTATGATGTTGATGCTGAGGCGGATATATTAATGAAACGTCGTGAAAGTCTACAATGTTGTGGAAGTCGTtgcttaaaaaattttccATGTGGTCATCGCTGCAATTCCATATGTCACTCTGGCAAATGTCCGAATCCGGAATCATGCCGTAAAAAAGTGCGAATCTACTGTGAGTGTAAACGTTTAAAATCGGAGGTGTCGTGCGATAAACATCGAGCTGGATGTACATCATTGGAATGCGATGAGAATTGTGTGGAGATTCGTACGAGACGTGAACAATTGCAGGCACAGGAAGCAGAGAAGCAGCGACTTCTAGAAGAAACCAAGAATCGTTTGGAAGTGGAACAATTTGAGAAGAAATTTAGCAAACGTAAGCATAAAGAGAGGAAGGCTttaattgaacaaaaaacaagaatGAATATTAActggaaaattatttcaatctATTTTGGAATATTGCTGGCAATTATAAGTGCTATTGCAGTTGCCTTCTATACGGATAATTAA
Protein Sequence
MSGAGNPWKINNLTKKPVNQNSRQNDVIASSRFNEVHARNIAAAKKVVDNYSSSSEDEEELDEKKIIESLYQHYEVPTNGQQFFTKTANILENVLHSGAATCLICIGSIRRTEAIWTCKHCYCFFHLSCIRRWANDSIAQLKSQAGQQQQTEGYYNNFGEFVPPKRARPLHWCCPQCRAEYTPEERPSEYLCFCGKEANPTSQSWLVPHSCGEICGKELQPQCGHKCMLLCHPGPCPPCAQYALVACLCGQSSKKSVRCVEKRWQCDRKCKKKLPCGEHLCNQLCHATGSCPPCSSTSKQSCECGREVKKRNCFDLKWHCQNVCGVSYSCGIHICKKVCHSGPCGNCPLGLPRSCPCGKTKKIGPCTEVIDTCGDTCQKLLPCQQHTCPQRCHRGECNLCLVIVKKKCRCGMREKDLPCSKEFTCDTKCKQMRDCGKHACNRKCCDGNCSPCDKICGKMLSCKKHKCQSICHEGPCYPCDRQSQVNCSCGKTSRNVPCGRERTARIVCLELCRLPSKCHHASRHRCHKNECPPCNQKCGLSNDTTGCGHICEAKCHAAVKVLRKNDANGASAWTQTQKFVFQKMPHPQCEVKITVTCIGGHEVAEWSCWNSKPTSCQRPCNRQLRCGNHKCALVCHAVENITDMKEQKGCAPCQEGCNIPRPNGCVHPCARACHLPPCSPCQVIMKTKCHCGLTQVLYKCSEFYDVDAEADILMKRRESLQCCGSRCLKNFPCGHRCNSICHSGKCPNPESCRKKVRIYCECKRLKSEVSCDKHRAGCTSLECDENCVEIRTRREQLQAQEAEKQRLLEETKNRLEVEQFEKKFSKRKHKERKALIEQKTRMNINWKIISIYFGILLAIISAIAVAFYTDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-