Basic Information

Insect: Megamerina dolium
Gene Symbol: -
Assembly: GCA_963854835.1
Location: OY978528.1:61840998-61851445[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.91 87 4.8 0.4 2 23 207 229 206 229 0.92

2 8 0.093 9 7.9 0.5 3 23 247 268 246 268 0.96

3 8 2.1e-05 0.002 19.4 3.4 1 23 1268 1290 1268 1290 0.97

4 8 0.004 0.38 12.2 3.2 1 19 1307 1325 1307 1328 0.92

5 8 1.3e-05 0.0013 20.0 0.6 2 23 1335 1356 1334 1356 0.98

6 8 0.031 3 9.4 3.6 1 23 1362 1384 1362 1384 0.98

7 8 0.029 2.8 9.5 2.5 1 23 1390 1413 1390 1413 0.96

8 8 0.0039 0.37 12.2 1.8 1 23 1422 1444 1422 1444 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.91	87	4.8	0.4	2	23	207	229	206	229	0.92
2	8	0.093	9	7.9	0.5	3	23	247	268	246	268	0.96
3	8	2.1e-05	0.002	19.4	3.4	1	23	1268	1290	1268	1290	0.97
4	8	0.004	0.38	12.2	3.2	1	19	1307	1325	1307	1328	0.92
5	8	1.3e-05	0.0013	20.0	0.6	2	23	1335	1356	1334	1356	0.98
6	8	0.031	3	9.4	3.6	1	23	1362	1384	1362	1384	0.98
7	8	0.029	2.8	9.5	2.5	1	23	1390	1413	1390	1413	0.96
8	8	0.0039	0.37	12.2	1.8	1	23	1422	1444	1422	1444	0.98

Sequence Information

Coding Sequence: ATGAATGATGGTTTATTTGCCAATTATGAGAATCTTTTCTCTGGCAATAGTTTTCAATCTTCAGATATTCCAACGagtatttttccaataattgaTAATGAATTGCCACCGACAACACATTACTTTAGCTGCATTTCAAGTGatccatcacaacaacaacaacaacaacagcaacagctaaTAAATATACCAAGTTCTTCTCTTCTGCCTTTGGATATTAcgccgacgacgacgacgacgacgacgacgatcaATACAAGTGGACCAATGAATACGGTTGGCAATTCGTTCGGCAATAGTATACCGTTTGTACAAATTCACACAACCGATGTGCAACCACAACGAAGTAGTTATGGAAATGTATTTCGTCGTACGACTAGTAATAATCATCATGAAATTAAATCGGAACTAATAAAATCGGAAAATTCGGATGCGACCAAAGATCGAACGAATACAACACCAACACCGCCAGCACGAAGTGCTAGTGGCAATGGCGGCATTGCAGGTTCAATACTTCCCACCATAGTAACCAATGATAATAGTGGTTCCATTGAAAATGTAACATCagctaaaaatttaattgattcacCTGTGACAGCAGTGTTGTCAACAGTATTGAAATGTAATCTTTGTCCTTATATTACACTTAGCAATGATAATTTGAATGATCACCATGTAAGTGTTCATACAAATGGTACATTTAGTTCGGGGGAGGAAATCTTTCCACCAAGAATTCTATGTCCAGGTTgtccaaatatattttacacatacaaCACATTAGAGCTGCATCTATGTCAGGATCACATGATGAATGTGGCTGAATCGAAACAGTTGATGGCATCCATCAAGCAGACTACTAATAAAAACGATGAGCATACGACAAAGGCAAATGAAAATCATGCTAATGTTGGAACGAATTCAGTTCCACCAAAGAgtagaatttatttgaaaaatgtggAGTGTTTGCGAGAACCTCGCCGTGAGCCGATAGAACAGCAAGAAAATCAGATCACCGATAATAATTGCTTTCAAATGACTTCCTTCGATGAAACGAATTGTAATGCGCTAATAAATGAAGCGGCAAACGATTTTATGGGAATGCTTGATGATGAAGTGAACCACGATGAAAAcgataatatagaaaataatattacaaatatcaaCAACACGTTAAatacacaaaagcaaaaaatctCGATTAAAAGCGTTGATGTCTTGAGAGAGCCAGCATTATTACGACGTGATTTCGAAATGCAAAATCTTTCAAATTTTGTGAATTCTTGCAGTGCCGGCGCTGATGTATTGGATTTGCATACAATAGGTGCCAATCATAGTGGCAATGAGCAATTCAATTATCCCATGGAGGTGAATGggaacagcaataataataatgatatctgCAAttccaataacaataataataccagCACTAATATACACACCAATAATGAGACTGCTTGCATATCATCCGCTGCCAGCAATTTACTGAACACATTTGAGAAACCAAGACgaccaaaaatttatataaaaaatgttgatattctAAAGGAGCCGATGGTGCTGACAAGCAACGCTACGAATATTGCCAATATACAAGAACCAAATAGTGCCGcaatgaatttcaattttacattAACCCAAACTATACCAAATGTTGTGACAAACAATAGTAATTTTATGAATAATTCCGCTGATACGAATAATGCCCCCGTCTTTGATATGAGCTCGATGAGCTCCATCTATgagaatagtaataataattttataccaaccatcaatgatgatgaaaatgaaaattatggatttattaGTACACAAAATGctcaaaattttgttatggaTAATCATCGTTTCATCGAAACGAATGGTTTAGATTGTGGCCTAGATAGTTTACATCAGTCAGAATGTACACCAATGATAACCgaaccaacaccaccaccgtTGGCgccacaaccaccaccaccaccagcaacaCCAGCATCATCAACACTATTACAATCTTTTACTATGGAGAATAATTCCATATTATCAACACATTATCACCACCACCAGCCGCAGCAGaagcaaaaaatattcattaaaaatgtggACATACTGAAGGAGCCACAATTTCAGGAACATCATCGTGGTACTCTACATTTACGCACGGTCGACGAGTTAAATCTTATGAATCGCAATGAAGTACAAGACTTGATTGCACCCAATTTGGATAATAACATTCAATTTGTAATTTCATCAAATGAGGATGATTTAAATGACAATTTCTCATGTACTATGGACAATTCCCAATTACCTAAACATGGTGATCATGATGCTGATGATCACAATGCTGATCGTGATGCAATTCCAGCTGATGATACTGCAactactgctgctgatgatggcGATGCTGACATTCTGAATAATATGGATCAGGACAACGATATCGTTAATGATGTTGTCGATGATGGAGATCCACTTTGTGAGGTTAGCAATTTTAAATTGCAAGATTTCGATGCACATGTTGTCAACAGTTGGACTGTAGATGATTATGATTTACGCGATGACATCGATTGCTATATCACACAAGCATCCTCGAATTCTCTCAAGGCTTTGCATGATTTGGAAACGCCACAAATGTCATTAATTTCCATACGAGATATTGAAGAGTTGACTGTGACACCCCAACATCAGCCACCAATcgtatcatcatcaacaacgtATCATCAAGATGTCGGAGAACAGCAGAATCATCAACAATCTATTTCACAAATGCAGTCCGGCACTAAAGAAGATCAAGACTTACCATGTACGGCGAATAATATGGCTACGGCCATTTGTGATTATCAAAATCACATTCCAATGGATGTTGAGGATAATCATATTGTAGAAGTACTCGAAGGAGAAGAAGACGAACTTAAGCAAGAACAAATATCGAATGTTGCACAGCAAAAGAAATCGACCATAGGTAATACAAAAGTTCTTCCATCATCTGTATTGATGAATGACATACATCGTCCAGTGCCACCACTAGTACCAGTTTCAACTGGTCTCATTGTCAATATGAATATTGcatcaacagcaataacaagtacaagcacaacaacagcagtagcaatGCCAACAATAATTGCCAGTGATCATCAGCCATCAGTGGTTACAAGTATACCAGTACCACCATTAGTACCTGTCTCACCAATGATTCAGCTCAAACCGTCTACGGCTGTACCTCCTCCtcttcctcctcctcctctCTCAACAATactaccaacaacagcaacgacaacaacagTTGAACGAGCACGTATCTATGTTGCTAACAATTTAATGCAAGATGCATCTAATAGAACATCAGCAGTCGTGCCAGTTATTGGTGGCACCTCCATAAGAGGTCGTCCCTTTGGTGCCAAACGTACTGGTGTCGCGGCGAAAGCGCGTAAATCAGATGGCACTAATCCAACAgaaccattatcatcatcagtatcatcatcatcagcagcatcagcatTATCATCGTCAATTATGATAAATGGTGCCAAATGTCCAATGCCAGGTTGTGCCTTTCGTTTTCAAAAACTTGAAAATCTGGATTATCATAAACGATGCCACAATAGTGATTCATCGGCAACATCATCACAAGCAATTATATGTCCGGAATGTAAATCGTGTGAATTCAATAATTGGAATACATTGCATACGCATCTTTGGCGTAGCCATCAAATCGATATGGAATTATATAGTTGTACATTGTGTTCGTTTAAGACCCCGATTTATTCGCGTCTAATAAATACGCATGCCAAAATACATTCGGACGAACGTAATCATCCGTGTGATAAATGTGATAAGGCCTTTAAGAATACGaaacaattgaaaaatcatCGACGTTGGCATCGTAAGAATGCAGCATTGGTAGCTGCAAAGGAGGCCGATCCGAATTTGTATCGTTGTAAAGATTGTGGTCGTGCATTCTCACATCAAAAGACTGTGCTGGAGCATTTTTGTAATGTGGGCGGGGCACAAGTGCAATGTGATATATGCAAACGTGTGCTGTCATCGAAATCATCATTGAAATTGCATATGCTAACACATGATACTGTCAAGCGATTTCAATGTGAACTCTGCAATTATACGGCAAATGATCATAATTCATTTCGACGTCACAAAATGATGCATGATAATACGAAACGATATAAATGTCCGCATTGTAGTTACAAATCGATACAAAGTATTGCATATCAGAAACATGTACAACAAAAGCATCCCGAACATGCAGattcaattatttacaaatgtCATTTATGTCCATTTTCCACAATTAATCGTACTCTACTTGCGGTGCATCAGACTAAACATGATACGACGAGTACAACGGCTGCGATAGttcaacaacaaaatgtcaCCGAATCGATCATCTGTACTGAGGAGGCAACAATTGTGCAACAAAAAGCATTAAATACTGATAATGatgtacaaatacaaaaaactaaaattaaagttaaaagCAATTTGCTTCTAACCTAA
Protein Sequence: MNDGLFANYENLFSGNSFQSSDIPTSIFPIIDNELPPTTHYFSCISSDPSQQQQQQQQQLINIPSSSLLPLDITPTTTTTTTTINTSGPMNTVGNSFGNSIPFVQIHTTDVQPQRSSYGNVFRRTTSNNHHEIKSELIKSENSDATKDRTNTTPTPPARSASGNGGIAGSILPTIVTNDNSGSIENVTSAKNLIDSPVTAVLSTVLKCNLCPYITLSNDNLNDHHVSVHTNGTFSSGEEIFPPRILCPGCPNIFYTYNTLELHLCQDHMMNVAESKQLMASIKQTTNKNDEHTTKANENHANVGTNSVPPKSRIYLKNVECLREPRREPIEQQENQITDNNCFQMTSFDETNCNALINEAANDFMGMLDDEVNHDENDNIENNITNINNTLNTQKQKISIKSVDVLREPALLRRDFEMQNLSNFVNSCSAGADVLDLHTIGANHSGNEQFNYPMEVNGNSNNNNDICNSNNNNNTSTNIHTNNETACISSAASNLLNTFEKPRRPKIYIKNVDILKEPMVLTSNATNIANIQEPNSAAMNFNFTLTQTIPNVVTNNSNFMNNSADTNNAPVFDMSSMSSIYENSNNNFIPTINDDENENYGFISTQNAQNFVMDNHRFIETNGLDCGLDSLHQSECTPMITEPTPPPLAPQPPPPPATPASSTLLQSFTMENNSILSTHYHHHQPQQKQKIFIKNVDILKEPQFQEHHRGTLHLRTVDELNLMNRNEVQDLIAPNLDNNIQFVISSNEDDLNDNFSCTMDNSQLPKHGDHDADDHNADRDAIPADDTATTAADDGDADILNNMDQDNDIVNDVVDDGDPLCEVSNFKLQDFDAHVVNSWTVDDYDLRDDIDCYITQASSNSLKALHDLETPQMSLISIRDIEELTVTPQHQPPIVSSSTTYHQDVGEQQNHQQSISQMQSGTKEDQDLPCTANNMATAICDYQNHIPMDVEDNHIVEVLEGEEDELKQEQISNVAQQKKSTIGNTKVLPSSVLMNDIHRPVPPLVPVSTGLIVNMNIASTAITSTSTTTAVAMPTIIASDHQPSVVTSIPVPPLVPVSPMIQLKPSTAVPPPLPPPPLSTILPTTATTTTVERARIYVANNLMQDASNRTSAVVPVIGGTSIRGRPFGAKRTGVAAKARKSDGTNPTEPLSSSVSSSSAASALSSSIMINGAKCPMPGCAFRFQKLENLDYHKRCHNSDSSATSSQAIICPECKSCEFNNWNTLHTHLWRSHQIDMELYSCTLCSFKTPIYSRLINTHAKIHSDERNHPCDKCDKAFKNTKQLKNHRRWHRKNAALVAAKEADPNLYRCKDCGRAFSHQKTVLEHFCNVGGAQVQCDICKRVLSSKSSLKLHMLTHDTVKRFQCELCNYTANDHNSFRRHKMMHDNTKRYKCPHCSYKSIQSIAYQKHVQQKHPEHADSIIYKCHLCPFSTINRTLLAVHQTKHDTTSTTAAIVQQQNVTESIICTEEATIVQQKALNTDNDVQIQKTKIKVKSNLLLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -