Mdol000376.1
Basic Information
- Insect
- Megamerina dolium
- Gene Symbol
- E2f2
- Assembly
- GCA_963854835.1
- Location
- OY978525.1:8196237-8207484[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.026 2.5 9.6 2.6 2 23 389 411 388 411 0.94 2 9 2.6e-05 0.0025 19.0 0.9 1 23 418 440 418 440 0.99 3 9 0.00022 0.021 16.2 0.5 1 23 444 466 444 466 0.97 4 9 0.0049 0.47 11.9 4.0 1 23 471 493 471 493 0.98 5 9 3.7e-05 0.0035 18.6 0.3 1 21 499 519 499 520 0.94 6 9 0.026 2.5 9.6 0.3 1 23 974 996 974 996 0.95 7 9 0.0018 0.17 13.3 3.1 1 23 999 1021 999 1021 0.94 8 9 0.025 2.4 9.7 3.5 1 23 1026 1048 1026 1048 0.97 9 9 6.5e-05 0.0062 17.8 0.3 1 21 1054 1074 1054 1075 0.96
Sequence Information
- Coding Sequence
- atggaTTCGCACAATATTGAGAGCATTGGAAAATgtgataaattacaattttcaacaaatgaTACATCACAAATGGAATATGGTCGTTCCTCCAATTCCTTGGTGTTATTAACACAgaaatttgtacatttaataaaacaaaatggtgGACAAATTGATGTGCTGGAAGCTACCGGAATATTAGATGTACAACGTCGTCGTATCTATGATATTATAAATGTGCTTGAAGGTTTGGGAATTGTACAGAAACAACGTTCCATGTTACGTTGGTGTTTGAATGATGATTGGATACAACTATCAAAAATGTTATGCACAAACTCGTTGAATACCAACGACAACAATTCCAAGTCAGATCTtGATGGATTTGAAGATGAtggtataaattttatttcacatgATACAGAAAACTTGAAAGTAACTTTGACAACATTTGAAACTTCTAGTGGTGATTGTGAAATTTTAGGAAAAACAAAAGCAGTGCAAACTGATTTTTTAGAGAAGCGCTCATGTGGTGTCATTGGTGTGTCGCTGGATAATACTACATTCAGCTTGAGCTGTTATCACTGTACTGTTGATGTGCCCATCTGGAATTGGGAAGCGTTTATTGTACATGTGAAAACAGAGCATCATGCATTGCAACATTtctatataaacacatatgtgGAATCAGAATCTGATGAAGAAGACTGTATGAACGAAAGAGATGGAAAACTGGAGGTTTTAACACTTGAGGATGTGGATAgcgataataatgaaaatgaaataCAATCTCGTACAACTTGCACCGAAAAAGTAATGAATAGCGCAAAGAAGCCACTGGCAAAAAATAACCAGCAGATACGATTTGGTGTGACGAATTCCACTCTTGTAATGGATTTTTTAGAAACTCTGAAACATTATCCCATTTTGTGTCATATGCGAAAGATTCCCTTAAAGCAATTTAAATGCGCTATTAACAAAATATTGACAGATTTAAATCAGCGTTGGCATACAAATATGAGCGAAGTTGTTATGATGAAATCATTGAACCGCCTTAAGGCATGGTTCCGTCAAGCCCTAGACCAAAGAGAGGAGAAGCCAGACTGTAAACTACGTTATgaaatgtattttgaaaaatgtgcaGAATTTTTACCAATTGAAGAAtacaaagaacaaacgaatacaaaatgtaatatttgtaaaaaatattttcctaaCGAGCAACTCTTGCACGATCATAAATATAAAGTTCACAACATTGATGAGACACGGTTTAAATGCAATCGTTGTGAGCAAATATTCTCCACCCAAGATGATGTTCGTACACACATGCAAGTGCATAAACGCCACTATGTCTGTGAAATATGTGGAAAGAATTATCCAACGCGTGCCCTTTACAAATCACACAAGTTATACCATGAACCACCAAAGCATCAATGTGAACTCTGCTCCAAGTGCTTCTATCGACCGTTTATTTTGATGGAACATATGAAAGTGCATCGTAATGAACGCGATTATGTGTGCGAGGAATGTGGAAAAACGTTTGTACGCCAAAAGCAGTATATGCTGCATAAAAAAGCGAGCAATGATATTACAGATGAATATCGTCAGTGTATCTATGATGTTATAAATGTTCTTGTTGGCTTGGGAATCGTTAAGAAGCGAGGCTCATTATTACGTTGGTGTTTGAAAGATGAGCAGGTGGATCTTTCTAATTTACCATGTCCATTATCGatgaaaaacaaatcaaagagcaaaaatgaatCAATGGAAACCGAAGAGGAGACTCAAGATGACTGTCAAGATATGGTGATTGATAATCAGGAAAATTTGCATATATCGGAACCCCGGCAGCAGAACACGAGTGAAGACAATATATTAGCATACGCAACTGAACCGATAGAAATGTTCTTAGAAAATCGGACTTGTGGTGTAATCGGTGTATCGATGAACAACAGCACATTTACACTGAATTGTTATCATTGTTCCCTTGATGTACCAATATCGAATTGGAAAGAATTTGTAACACATGTACAAACAGAACATCATCCATTGCAACATTTatatatcaacaaaaatataataactgaGGAATGTGATATAGCATATGGAAATAATGCAAAAGAGTACGATATAAAAGAAACAACATCAAACGAAGAGGATAATGATATTGATGGTGTTGAAAAATCTCTTACTTTGGATAACATAAAAGAAGAAGATACGAGAGAATGTGCTGTCATCATGGAGATCTATAAACAAGACGGAACTTTACTAGGAGAACCACTAATCATAGAAGAAGGAATAGATGATATCATAGAAGAAATACAGGACAACGACGAGGAGTGCAGATATGATGACAATGGCATTGAGAATTGTATTACAATCTATAGCGATGACGATGTTGGTGCTGATGATGCTAATAACACCCAAAAAGATAATGTCGAAATACGAACAGATACAACTCCTGGCGATGATGCTGAAATATGTGATGAGGAGAGCTCGGAAGAGGGCGAAGATAATCAACAGATACGATTTGGCAAAACTGACGACGCCGCTGTAGTCGATTTCCTGGAAACACTGAAACAACATCCCATTTTATGTCACTTACAACATATGCCTTTGAAGCAATTTCGAGCAGCCATTAATGAAGTTATTGCATATTTAAATCAACGCTGGTTATTATCTATGACCTACACTACTTTGATACAGTCGTTGAATCGTCTGAAGGATTGGTTCTGCCGAGAGATGCATTGGAAGGAAAAGAGGCCAGGCTATCAAATACGTTATCAAGCGTATTTTGAAAAGTGTATGGAATTTTTGCCAGTCAATGAGTACAAGCTCCAGCTAACTGTACCATGTATAATatgcaaaagaaattttttgaacGAGCTACAATTGAAACGTCACAAATTTAGGTGTCACAAGTTGGGTGTCCATCCGTTTAAATGTCATATCTGCGAAAAACTTATTGCCACCGAGGATGGCTTACGCAACCATGAAGCTAATCATAAAGAATTCGATTGCGATATATGCGGCAAACGTTTCACTTCATCTCATACTCGCCGATTGCATAAGTTACTCCATGCGCCGCCAAAATTTAGTTGTGAATATTGTTCAAAACCTTTCCGTTTAGAGCATCGTATGAAACAGCACTTGAAAGAACATACAAATGAACGTGATTATATATGCGAAGAATGTGGAAAGACCTTTGTATATCAAAAGAAATACATGGAGCATATGAAGGGGATGTGCAGAATGATTTTTCACACCACCAAATTTACCGTAATGCTAAAAAAGAACAACGAATTTACAACAACAGCTACCACACCACTCAACGATAAGCAACCAACAACGACTAATTGTTGTTCAGCACAACGACAAGCAATTGAAAATGGTTTCGCCCAACAGCAACCGTCTGCCTTTTGTTTCAACAGCAAACGGTAA
- Protein Sequence
- MDSHNIESIGKCDKLQFSTNDTSQMEYGRSSNSLVLLTQKFVHLIKQNGGQIDVLEATGILDVQRRRIYDIINVLEGLGIVQKQRSMLRWCLNDDWIQLSKMLCTNSLNTNDNNSKSDLDGFEDDGINFISHDTENLKVTLTTFETSSGDCEILGKTKAVQTDFLEKRSCGVIGVSLDNTTFSLSCYHCTVDVPIWNWEAFIVHVKTEHHALQHFYINTYVESESDEEDCMNERDGKLEVLTLEDVDSDNNENEIQSRTTCTEKVMNSAKKPLAKNNQQIRFGVTNSTLVMDFLETLKHYPILCHMRKIPLKQFKCAINKILTDLNQRWHTNMSEVVMMKSLNRLKAWFRQALDQREEKPDCKLRYEMYFEKCAEFLPIEEYKEQTNTKCNICKKYFPNEQLLHDHKYKVHNIDETRFKCNRCEQIFSTQDDVRTHMQVHKRHYVCEICGKNYPTRALYKSHKLYHEPPKHQCELCSKCFYRPFILMEHMKVHRNERDYVCEECGKTFVRQKQYMLHKKASNDITDEYRQCIYDVINVLVGLGIVKKRGSLLRWCLKDEQVDLSNLPCPLSMKNKSKSKNESMETEEETQDDCQDMVIDNQENLHISEPRQQNTSEDNILAYATEPIEMFLENRTCGVIGVSMNNSTFTLNCYHCSLDVPISNWKEFVTHVQTEHHPLQHLYINKNIITEECDIAYGNNAKEYDIKETTSNEEDNDIDGVEKSLTLDNIKEEDTRECAVIMEIYKQDGTLLGEPLIIEEGIDDIIEEIQDNDEECRYDDNGIENCITIYSDDDVGADDANNTQKDNVEIRTDTTPGDDAEICDEESSEEGEDNQQIRFGKTDDAAVVDFLETLKQHPILCHLQHMPLKQFRAAINEVIAYLNQRWLLSMTYTTLIQSLNRLKDWFCREMHWKEKRPGYQIRYQAYFEKCMEFLPVNEYKLQLTVPCIICKRNFLNELQLKRHKFRCHKLGVHPFKCHICEKLIATEDGLRNHEANHKEFDCDICGKRFTSSHTRRLHKLLHAPPKFSCEYCSKPFRLEHRMKQHLKEHTNERDYICEECGKTFVYQKKYMEHMKGMCRMIFHTTKFTVMLKKNNEFTTTATTPLNDKQPTTTNCCSAQRQAIENGFAQQQPSAFCFNSKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00966950;
- 90% Identity
- iTF_00966950;
- 80% Identity
- iTF_00966950;