Basic Information

Insect: Megamerina dolium
Gene Symbol: wdn
Assembly: GCA_963854835.1
Location: OY978526.1:31914026-31916780[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 7.3 7e+02 1.9 0.1 1 20 249 269 249 273 0.77

2 8 6.3e-05 0.006 17.9 0.7 1 23 277 299 277 299 0.99

3 8 0.075 7.2 8.2 1.8 2 23 311 331 310 331 0.93

4 8 3.4e-05 0.0033 18.7 1.0 3 23 339 359 337 359 0.97

5 8 7.4e-06 0.00071 20.8 4.2 1 23 365 387 365 387 0.98

6 8 0.00027 0.025 15.9 3.0 1 23 393 415 393 415 0.97

7 8 5e-06 0.00048 21.3 0.8 1 23 421 443 421 443 0.96

8 8 0.00012 0.012 17.0 2.3 1 23 449 472 449 472 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	7.3	7e+02	1.9	0.1	1	20	249	269	249	273	0.77
2	8	6.3e-05	0.006	17.9	0.7	1	23	277	299	277	299	0.99
3	8	0.075	7.2	8.2	1.8	2	23	311	331	310	331	0.93
4	8	3.4e-05	0.0033	18.7	1.0	3	23	339	359	337	359	0.97
5	8	7.4e-06	0.00071	20.8	4.2	1	23	365	387	365	387	0.98
6	8	0.00027	0.025	15.9	3.0	1	23	393	415	393	415	0.97
7	8	5e-06	0.00048	21.3	0.8	1	23	421	443	421	443	0.96
8	8	0.00012	0.012	17.0	2.3	1	23	449	472	449	472	0.98

Sequence Information

Coding Sequence: ATGAAAGAAGAAGCGCCAAGTAAAAAAATGCCGCCTAAAATGATGAATGGAGGAAATTTTGCCAACATTCATACTAAGGCAGCAAGTGATGAGATATTAAGTACTCTACTGcgtattaataattttgactcGATTTCGAGTATTAAGGACGAATCTCTAGACATTGATTTGTCGGCATGTGTTACTATAAGTGCAGATCCAGCTGTAATGATAAATGGAAACAGTCTGTCTTCGGTAGACTTTTGGCGAGTATTGGACGAGAGCGCACAAAACTCACACTTGGATATCACTGCGATGAGCGATGAAGGCAGTGCAATGCATGAATCGCAAAAATCCAAGGATAGCAATACCACGAACTATTCGACGACAATGAAAACTCCATTAAAGGCGGGCACAAATACCTTTAGTGAAAATTTCCTACGTCCAGAATTACCCTCAGTAACATCATATTCGCCGTCAAAACGGATTACGAATATCCAATCAGAGGATGAAAGTAATAAAAGAAGGGGGGCCATTGGTACTATGTTTTATAAGTATAAAGATTCGCCCGATATTAAGGAGGAACCTGCAGAACATCTTTTTAATCAGTCTAGCAAAAACAATTTGATCTCAGCTCCTATTTTTGAAGTGATTCGATTGCCTTCAGTCACAGCAAAGGCGGAGACACTTTCAAATACCATAAAGAATTTATCAAAGTGTGCTGTTGGAGACGGGACACCCATAGCCATATCAACTCAAGCGATCTATAAATGCCTAGATTGCGATGGAAAACTACTAAACGGGCAAAAGGAATTGAAATCTCATGAGGCTGCTTCTCATCGTATTCACTACAAGTGCAGCTTGTGTGAACGTGAATTCGAGCAAGATGCTGGACTCAAGAAACACTTGAAAACACATCGATCAGTCGAATCACGGAAGGATGCTTGGAAAAAATGTCCCGATTGTGGCAAGTGTCTAAAGCTAGGCAGTATGTGGATGCATCGTAAGATCCATAGTGATAACAAAAAGTATGGATGCGAAATTTGTGGTCAAAAATTTGTGCAAAAGATTAACTTGACACATCACTCACGTATTCACACTGCGGAGAAGCCTTTCGAATGTCCGGAATGTCAAAAAAGatTTCAAGAACGTTCCCATTTGCAAAGGCATCAAAAGTACCATGCACAAACTCGTTCCTATCGTTGTGAGAAATGTGGAAAGATGTATAAAACAGAACGTTGTCTAAAAGTTCATAATTTGGTGCACTTGGAGCAACGTCCGTTTGCTTGTAATGTCTGCGACAAGTCATTTATTAGTAATTCTAAGCTTAAGCAGCATTCTAACATCCACACCGGTGAACGGCCATTCAAATGCAATTATTGCCCACGAGATTTTACCAATTTTCCTAACTGGCTTAAGCATACTCGACGCCGTCATAAAGTCGATCACAAAACTGGTGAACACCTCGAGAACATTCCCTCATATTGCTCCAAGAAATCAACGAAATCAACCAAATCATCACAAAAAGTCAGTGCTGAAGCCGATGCAAACAACACTGGCGCGAATAAAGCAACTAACATGATCGCAAATGATGCAACACTTACCAAATCTGGTCAGCCGAGACGAAAGAAAAAAGTCACCGAATTGCAGTCAACATGTATGGATCAAGGTGTCGTAAATACACTGTCTACCCTTGAACCGAATCTGAGCACATTTGCTCCACCTCCAGTTGTAAACACGCCAAAAATCACAAAAGCAAAACGTGAGCGTAAGCAATTAACCCCAAAGCAAGTACAGAAACCGCCTATGGTAGCGATAAAAAGAGAGCTAATGGAACCAAAAATGTTGACCAAGGATACAAAGCCACAAACCACGAGTAATTTCCCTGATCTGCATTGCCTCAGTTTAGCGTCTGCAGAGGAGCTAATCATGGAGCAAGCTCTGGAAATGGAAGAGAGTGGTTTGTATATCCCTCCAGCATCAGCCAATGGCACCGACAATGCTATTTCATCCGATGCAATCGATGTATTAcagttcaaaataaaaaatgaatatggtACCGATAGAATAAAGCAAGAATTTGtaaatcAACGAGGAGAGGTACAAAGTAGTCGACTTCTATGTTCGTCATTAGAATCGTCACCATATTCATCACCAGCTTCTATTGAAATCACCTCATCAACCGCGTCATCAGTTCCGTCCAACACTACATTAGCGGATACCCCCATCACATCGACAGCAACAAATTTGTATGCTCATAATTTAACTATAAATTCGTCAGAAGGAGCAGCATTAGTGACGAGCCTAAATAACATCACATCCATCTTATCTGCTACACCCacgcagcagcaacaacaaggcGCAAATGATATCGAAGCACATGCGATGCATTCGATATCATTAGAACATGAACTTTCTGGTGGTACACATGAGTTTATAAATCGCCTTTATTTGCCTCTGACAATGCCACTACTTGTACCACCGAATCAAGTGTTGCCGTCTGTTAGCACTTTGCTCTTCCCCTCAAATGCGAGTTTATACGGAAAGAACATAATACAGACAACAGCAGCTCAGCAAAACATGTCCTAA
Protein Sequence: MKEEAPSKKMPPKMMNGGNFANIHTKAASDEILSTLLRINNFDSISSIKDESLDIDLSACVTISADPAVMINGNSLSSVDFWRVLDESAQNSHLDITAMSDEGSAMHESQKSKDSNTTNYSTTMKTPLKAGTNTFSENFLRPELPSVTSYSPSKRITNIQSEDESNKRRGAIGTMFYKYKDSPDIKEEPAEHLFNQSSKNNLISAPIFEVIRLPSVTAKAETLSNTIKNLSKCAVGDGTPIAISTQAIYKCLDCDGKLLNGQKELKSHEAASHRIHYKCSLCEREFEQDAGLKKHLKTHRSVESRKDAWKKCPDCGKCLKLGSMWMHRKIHSDNKKYGCEICGQKFVQKINLTHHSRIHTAEKPFECPECQKRFQERSHLQRHQKYHAQTRSYRCEKCGKMYKTERCLKVHNLVHLEQRPFACNVCDKSFISNSKLKQHSNIHTGERPFKCNYCPRDFTNFPNWLKHTRRRHKVDHKTGEHLENIPSYCSKKSTKSTKSSQKVSAEADANNTGANKATNMIANDATLTKSGQPRRKKKVTELQSTCMDQGVVNTLSTLEPNLSTFAPPPVVNTPKITKAKRERKQLTPKQVQKPPMVAIKRELMEPKMLTKDTKPQTTSNFPDLHCLSLASAEELIMEQALEMEESGLYIPPASANGTDNAISSDAIDVLQFKIKNEYGTDRIKQEFVNQRGEVQSSRLLCSSLESSPYSSPASIEITSSTASSVPSNTTLADTPITSTATNLYAHNLTINSSEGAALVTSLNNITSILSATPTQQQQQGANDIEAHAMHSISLEHELSGGTHEFINRLYLPLTMPLLVPPNQVLPSVSTLLFPSNASLYGKNIIQTTAAQQNMS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -