Basic Information

Gene Symbol
TRERF1
Assembly
GCA_963854835.1
Location
OY978526.1:10431004-10446943[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-10 2e-07 31.9 0.2 3 45 1683 1725 1682 1726 0.94

Sequence Information

Coding Sequence
ATGTGTAGCGCCTCAGTTGGTACCACCGAAGTCGGTTCTGTAACACTTCAATTACGTGATACATCATCGAATTCATCGTCGAATTCAAATCAATCGTCTCCAGCTCCAATCACCAGCATAGCCGCCAATAGCCATACAACTGCAACAGCAACTCTGGACAATGCATTAACCATTGGTTATCCGGATCCGGAAATGTTGGCTGACGTTTTGGGCACATTACAAACAGCTTCACTCaagaataatagtaataataataatatcagtaCAATAACAGCAACCACAAAAATAGCCAACGGCAGCggcaataataatagcagcagcaacaacaacaacggcaataataattcaaacaaaataacCATAACAAGCCGTCCTGTACAAACTGTATCAACATCAACGAATactacaaataaaacaaatagttACATCAAAAACTGCCTAATACGTAGCAGTAGCTGTGGTAGTAACAACGCTAATGCCAACGTTACATCGTTGGCACAAATAATGAGCAACGGCGGTGGCGGTGGCAATGGAATCGTCAATATCAGCAgcggcagcggcagcagcagtaATAGTAACACATCGCTGATAAACAATTCGACAAACACGAATAGCAATTGTAGTAGCAACAGTGTGTTTAGCAGTAATTCAAGTTCAAGCAACGACAGTACAATTAGCATTACAGccagcaacaacagtaatagCAACAGTAACAGTGGAAATCTGAAACAACATATTGTTGGCATTGGTAATAAGACTATTTCCGCCTCCACAACgattatcaacaacaatagcaatagcagtaCCACATGCACCACCGTCAGCACTgctaccactaccaccaccgtGAATACATCGACGATTGTAAAGAAGAGTCGACCAAAATTGTCGTCACCAACACGACACGGACCCCAACAGTGTcagATTTGCAGTAAGATATTTGGAAATGCATCTGCTTTGGCCAAACATAAATTGACGCACAGCGACGAACGGAAATACGTTTGTGCGATGTGCTCAAAAGCATTTAAGCGACAAGATCATCTAAATGGCCATATGATGACTCATCGTAATAAAAAACCCTATGAATGTAAAGCAGAGGGCTGTGGAAAATCATACTGTGATGCACGCTCATTGCGACGTCATACTGAAAATCATCATGCTGGCATTATAACACCACAAAATCAAACACTTTCACCCACTGCTGGAACGCCAACGGGCCTAAGTTTATCACCGGCCACTGCAAGTGGTGATGCAAGTTCACCGGACGGTGCCACTTGCATTCGTACATATATATCAACAGGCGGCACAATTGTCGATGCATCAACTGGTATTGCTCTAACCGAAGATCAGATTAAAGCTATAAATTTACCGATTAAAACTGGTGTCACTCTCTTGTCTCCCACATCGCCTTCGACCTCGTCTGCTGCATCGCCAACAATCGCTCTGACCGACACCCATATCGAGAGTGAGGGACTAACGCGGGAACAACTCGATTTGATCAGCAAGATAATGCAGCAAACCAAACAGACTAGTGCTCAAGTTACGGTCTCATCGCCGACCAGTGTGAACTCGTACAAAGTTGATGCCAGCGGTTCTACGCAATCCACTGCATCGCATACTCCTATTCCCACGAGACCACGTACTTGGAATATGCAATTGCTGAATAGCTCACAAAACGTTTCGATCACCGTGGATGAAGCAACAACATCCGACTCATTGTCCAGCACGACAACTGCTGGAGCGTCTTCGGCATTAGTGCCGGCAACGACGACAACACTCGTCGAGGTCAAAGATGATGAacacaatcaacaacaacagcaacaacaacaacagttggTTACCGCAATTAATCCGCACCTATTGAATATAGTAAAAATTGATCAGAAGCCGGTCGAGTGTAATTTGTGCCAtcgtaaattcaaaaatatacccGCCCTGAATGGGCATATGCGCTTGCATGGTGGCTATTTCAAAAAGGATCCAGAGACAAAGAAGGCAGAGAAAAAGGAGCCAAGCGGCCCACCATTACAAACGGCCAGTATTGGAGTGCGCGCTCTCATCGAAGAGAAAATTATTAGCAAACGCAGCAAAGATCTAAATAAGGGTGCCTTTGTAGTTCCGGCACCACCCGGTAGCATAGCCAGCTCAACCACAATCCGACGATCAATTAGTGATCTGGAGAGTTTCCTTAATCCAAAAATACACTCCACATTAAACGGTGCCACTAATAACAACGGCACTAGCAACAATAATACAGTAACGCATACAACTATTCTGCccgcagcaacaacaatcaagGGTGCTGGTGGTAGCCTAAGCATACAGCAGATTGGACTGCCACAGAGCATAGAAATATTCAGCACAAAGCAACAAAAGACAGTGAACAACGTAAGTGTGGGTGTGGGCACTACAGCACACACCACAATGCCAACGAGCTCAACGATAATTCCGTCAACGATCAAAACGATATCAACGACAAACACAACGACTACGAAGGGCACTTCAACCGATCCAAAAGATTCCACGCTCATTGAGCTTTTAAAACGCGGCACTCGAATAGCTGTAACAGCCAAGAAGCCGCAAATTAGTACAAACATtgccagcaacaacaatatcatccACAATCACAACAACAGTGCATCAGCTGCTGTGGCAACGGCGCGTCAAATCATTACGAATAATAATCGGACAGTGATTATTCCATCCGATGTTCAAGTTGTGCCCACCAAATGCAAGAATGCAGAAAGTTCTTCATCACGCTCCTCCACGCCAGCAAGTATTTCTTTGTCCGATGCGACTCCGTTGTCCCTAACCATTTCACAGAGCAGTGACAGTGCTGCCGGTGACATATACACGGTCACATACAGCAGTGATACGGTCGGCTTGTTCGACGATGCCGAAGTCTACAATGTATCCGATACGGAAATGCTTCTGCAAACTGTAGATTCAATGCAACTGCTTAGCGATGATGTCGAACGCATAAAAAGCGAACATTCCGAACACTTTACATTGGTCAGTCACAGCTCGGATGACATACAAGCTGATCAGCTGATCAAAATTAAAAGTGAAGCGAACACAGTCGATTCTGCGATTTCGAATGTCATCTCTAATATACCAGCCACAATTAATACGACATTACCCACCAGTCTGCCCACTTTCCAACAATTCCATTCCAAAGAAATCATCATGCAGAACAGTTCGCAAATACAAGCGGTGACAAGCATTCGTGCGAATAGTCTTACGCTACCGACAGATCTGAAACATCAATTAGGTGGCATGTCATCACCGATGGACTCGCCTCTGTCTTATCCAACACCACCTTCTAGTCATGAAAATGTCACACAATCATCACCGTACATTGAGGATAATCATCACTTTGCCGACTCGAATAATGCATTCTTTGGTGAGAAGTGTAGCACCGATTTCCTGGGGCACGCACACAGCGAAGCAACATATTTCAAAACTGAGCATGAATTGTCCGATAACGAAAAGATTCTGAAATTGAAGAATGTTCTAGAAGAGTCTGCTTTCGATGTACCCATCAAAGTTGAAGATCTATTGAATGCGGCAAATCAAAATGACACAGAGTGTGATTTGCGTGAGTTCGCCGAAACGAATCTATCATTTTTGGATGAGGATCAGGAGTTTCTGAATGATTCACGTAATACCACTTCACCGCTCTCCGAATCTTTCTTCACCAGTGGCATCGGTTCGGCTGAAGAGGTCAAAGAGGTGTTGCGCGAAGTTTTGCCCgaggaaaatatgaatttgaattgtGAGACACAGGGAGAGAATATTATCGATCTTTATTATCTGCCTGGTTTGGGCTTGCAATCGCATATGATGCCAAATTCGGAAGATCCATTGCTGTCTTCATCACCCAGAGATTTTGGACAGCAACGtttgcagcaacagcagcagcagataTTGCAAGTACCACAACAAATTCAGGTACAGCAACAGGCGCAACAGCAACCAACTCTCTACACACAACATATCGAATCGCGTCACCAGCAGCCACAAGATGTAAaacaactgcagcagcagcaacagcagccaaGTAATTTTATATCCAATCAAATCATTGTACCGCTTTCGACTGCAACGGCAACAGCTACACATCTCCAATACAATGTTCAAAATCTACCACCACCTCAAGTACAAACTCAACCACAGTTCATAGAAGCGTCTGCAATTCAGAGTGTCAGTAGCATTGAGGCTGCCATGATGCAACCCATTATTTACACTGGCTCCACCGATAGAGAAGAGATTAATCTGAGCTCACAATCCATcaatatttgtaacattttgacAACCAGCTCAAACATCACCGAATCCACAACAGAtgccaatatttattttaccacAACCAGCACAAGCACAAGCACGAGCACAATTGGTGTGCCACCGGTACAAAGCATTACTTTCACATCTCCGATACCTGCAACGGTGATTTCCACCCTACAACCACTGTCCAATCAGACTAATTCCATACTGAAGCGACGACTGCGAGCGAACGGTTCACACGATAACAACATACCGCACATTTACTCCAAATATCACGCCTTGTCACCGTACCGCTCCAAATTGCGTAAACCGTCACGGACTCACTACACCCCAGCACCGATACTGAATCCAGATCGCAAGGGAATGGGCCTTTATTGTAATGTACGCAAAGAATTGGGTACTGGCCTAATATCGTTTGATACATTCGATGATGACTTTGACGATCCAGTGGGTTTGGTTGATTTCTCTGACGAATCCAAAGTAAATCTGGGCTCAGCATATCAAGCGCATATACCAGCATGTAAAGAACGTGATGAGTCTGACATACATGAGACCGTCAGCGCTGAGCAGATGTGGAATCCAGCTGTACAAACAGATGAGAAGATACTGATGCGTTACATTGATCTAAGTAAATCGTCCGCCGTACCCATGGGTAGTCATTCGGAAGAGGTGGCTTTACAGACTCTACTAAAATCGGAAGGTAATACTGCATCAGCAGTATTGACATTGCTGCAAGCACAATCGAATTCATTTCACATTAAGTGGACCGCCCATGAGCTGGAAATGTTTCTCAAAGGTCTTGAGAAGCATGGCAAAGATTTTAGTAAAATTGCTTTAGAGTTGAATACTAAAACCACGGGTGAGTGCGTACAGATGTACTATTTCTGGAAGAAATTGTGTGTGGACTATAAGGTGTCACATCTGAAGACAGAAACAGTCAGTACCACCACACCCAGTATAGATGTGAAGCCATATGTTTGTGAGGTTCCCGATTGTTCGGCGAGTTTCAGCTCGAAAGCAGCTCTGCATGGTCATACCCGCATTCACACCTATGGCAGAAATgccaatcacaacaacaacaataacaacaacaacaacaacaacagcaatcacaGCAATCAAACAGCTATAAATactcataacaataataatgttataatcacaaacaacagcaacacaacCACCGCATGTACAACGCAATTgggcaataacaataataataataataacaacaacaccacctCGACCACCGCTACCGCCACCGCCACCACAATTGGCCAacacagtaacaacaacaacaacaacaccaccagcAGTTCCCATAAAGATCAAATCACTAACAAGGACAGTGACTATCCCTGCAAGGTGTGCGGCAAAGTTTTTATCAAAGTGAAAAGTAGAAGTGCTCATATGAAAACACATCGTGTACAGGATGCTGATATAACAAATGTGCAAcaaatgcagcaacaacaacaacttctgcatcaacaacagcagcagcagcagcagcaacaacaacaacaacaacaacaataa
Protein Sequence
MCSASVGTTEVGSVTLQLRDTSSNSSSNSNQSSPAPITSIAANSHTTATATLDNALTIGYPDPEMLADVLGTLQTASLKNNSNNNNISTITATTKIANGSGNNNSSSNNNNGNNNSNKITITSRPVQTVSTSTNTTNKTNSYIKNCLIRSSSCGSNNANANVTSLAQIMSNGGGGGNGIVNISSGSGSSSNSNTSLINNSTNTNSNCSSNSVFSSNSSSSNDSTISITASNNSNSNSNSGNLKQHIVGIGNKTISASTTIINNNSNSSTTCTTVSTATTTTTVNTSTIVKKSRPKLSSPTRHGPQQCQICSKIFGNASALAKHKLTHSDERKYVCAMCSKAFKRQDHLNGHMMTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHAGIITPQNQTLSPTAGTPTGLSLSPATASGDASSPDGATCIRTYISTGGTIVDASTGIALTEDQIKAINLPIKTGVTLLSPTSPSTSSAASPTIALTDTHIESEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVNSYKVDASGSTQSTASHTPIPTRPRTWNMQLLNSSQNVSITVDEATTSDSLSSTTTAGASSALVPATTTTLVEVKDDEHNQQQQQQQQQLVTAINPHLLNIVKIDQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDPETKKAEKKEPSGPPLQTASIGVRALIEEKIISKRSKDLNKGAFVVPAPPGSIASSTTIRRSISDLESFLNPKIHSTLNGATNNNGTSNNNTVTHTTILPAATTIKGAGGSLSIQQIGLPQSIEIFSTKQQKTVNNVSVGVGTTAHTTMPTSSTIIPSTIKTISTTNTTTTKGTSTDPKDSTLIELLKRGTRIAVTAKKPQISTNIASNNNIIHNHNNSASAAVATARQIITNNNRTVIIPSDVQVVPTKCKNAESSSSRSSTPASISLSDATPLSLTISQSSDSAAGDIYTVTYSSDTVGLFDDAEVYNVSDTEMLLQTVDSMQLLSDDVERIKSEHSEHFTLVSHSSDDIQADQLIKIKSEANTVDSAISNVISNIPATINTTLPTSLPTFQQFHSKEIIMQNSSQIQAVTSIRANSLTLPTDLKHQLGGMSSPMDSPLSYPTPPSSHENVTQSSPYIEDNHHFADSNNAFFGEKCSTDFLGHAHSEATYFKTEHELSDNEKILKLKNVLEESAFDVPIKVEDLLNAANQNDTECDLREFAETNLSFLDEDQEFLNDSRNTTSPLSESFFTSGIGSAEEVKEVLREVLPEENMNLNCETQGENIIDLYYLPGLGLQSHMMPNSEDPLLSSSPRDFGQQRLQQQQQQILQVPQQIQVQQQAQQQPTLYTQHIESRHQQPQDVKQLQQQQQQPSNFISNQIIVPLSTATATATHLQYNVQNLPPPQVQTQPQFIEASAIQSVSSIEAAMMQPIIYTGSTDREEINLSSQSINICNILTTSSNITESTTDANIYFTTTSTSTSTSTIGVPPVQSITFTSPIPATVISTLQPLSNQTNSILKRRLRANGSHDNNIPHIYSKYHALSPYRSKLRKPSRTHYTPAPILNPDRKGMGLYCNVRKELGTGLISFDTFDDDFDDPVGLVDFSDESKVNLGSAYQAHIPACKERDESDIHETVSAEQMWNPAVQTDEKILMRYIDLSKSSAVPMGSHSEEVALQTLLKSEGNTASAVLTLLQAQSNSFHIKWTAHELEMFLKGLEKHGKDFSKIALELNTKTTGECVQMYYFWKKLCVDYKVSHLKTETVSTTTPSIDVKPYVCEVPDCSASFSSKAALHGHTRIHTYGRNANHNNNNNNNNNNNSNHSNQTAINTHNNNNVIITNNSNTTTACTTQLGNNNNNNNNNNTTSTTATATATTIGQHSNNNNNNTTSSSHKDQITNKDSDYPCKVCGKVFIKVKSRSAHMKTHRVQDADITNVQQMQQQQQLLHQQQQQQQQQQQQQQQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00967550;
90% Identity
iTF_00967550;
80% Identity
iTF_00967550;