Mdol006202.1
Basic Information
- Insect
- Megamerina dolium
- Gene Symbol
- -
- Assembly
- GCA_963854835.1
- Location
- OY978525.1:88470670-88471866[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00015 0.25 12.0 0.0 3 39 15 51 13 55 0.90 2 2 0.00014 0.22 12.1 0.0 2 38 66 101 65 106 0.86
Sequence Information
- Coding Sequence
- ATGATGCGAAATTACAAGCGAAAGAAGCAGCCGATCGACAAAGAAGCCTTGACGAATACCATTGCGGCCATCAGAAGTGGCGAGACAGTGAGAAAGGTGgccaaacattttaaattaaattttgagacTCTGCGAACGAACGTCAATCGGTCAGCTGGTGAGGAAAGAGGAGATAGacagcataaaaaaataaacgaaacacaATTGAAGAAAGCAATTCTCGCCATGGAAAAAGGAATCACAATCGCAAAAGCTGCCGAAACCTTCAAATTGAATTACCAGTCTTTGAGAAACAACATTAACCGTCCAATGCCGTCAATATATCGAACTCAAGATTTCAACGCAGTTCAAGAAACGGCGATAATGAATTATTTGCTGAAATCAAGTGCCATGTATTACGGCCTGTCAACAAGAGACGTGCGAAATTTGGCAGCAGGTTTTGCTGAAAAATTGGAAATCGATGTGCCGGATAATTGGAGAAACGAATATATAGCAGGCAAAGATTGGTTTCTGTCATTCATGAAACGCCATCCGAAATTGTCGCTTCGCAAGCCACAAGCAACAAGCTTGGCCCTTATGGACGAGGTGAAAATACAACCACAACATATTTGGAATATGGATGAATCCAGCGCCACCAAAGTTCACACGCCAGAGCGTGTGGTTGCGCCATACGGAGCCAAACAAATTGGCAAAATGACATCGGCCGAACGAGGTCAACTCGTCACGATTGCAGTTGCCATAAGTGCCACTGGTGCGGCAATTGCGCCATTCTTTGTTTTTCCGAGtgttcgttttcatccacgtttTTTAAATGGAGCGCCGCATGGTTCAGGAGCCACAGCAAATCAATCAGGATGGATTAACGctgattcttttttattattcttggaaAATTTCCAATCGTGCATTGCTTCATCGAAAGAACAGcccaaattgttattgttgggcaACCGTGAATCTCATCTCTCAATCAAAGCGTTGGATTCCTGCGTCGAGTATGACATTCATGTCGTCTCATTCCCGACGCATTGCACGCACAAACTTCAACCGCTCGACCGCAGCGTGTTGGACCATTGA
- Protein Sequence
- MMRNYKRKKQPIDKEALTNTIAAIRSGETVRKVAKHFKLNFETLRTNVNRSAGEERGDRQHKKINETQLKKAILAMEKGITIAKAAETFKLNYQSLRNNINRPMPSIYRTQDFNAVQETAIMNYLLKSSAMYYGLSTRDVRNLAAGFAEKLEIDVPDNWRNEYIAGKDWFLSFMKRHPKLSLRKPQATSLALMDEVKIQPQHIWNMDESSATKVHTPERVVAPYGAKQIGKMTSAERGQLVTIAVAISATGAAIAPFFVFPSVRFHPRFLNGAPHGSGATANQSGWINADSFLLFLENFQSCIASSKEQPKLLLLGNRESHLSIKALDSCVEYDIHVVSFPTHCTHKLQPLDRSVLDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -