Mdol014057.1
Basic Information
- Insect
- Megamerina dolium
- Gene Symbol
- -
- Assembly
- GCA_963854835.1
- Location
- OY978527.1:14125168-14125645[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-07 0.00033 21.2 0.0 2 38 14 49 13 55 0.91 2 2 0.00022 0.36 11.5 0.0 2 41 67 105 66 108 0.79
Sequence Information
- Coding Sequence
- ATGGTGCGAAATTACAAGCAAAAGAAGCAGCCGACCGACAAAGAAGCCTTGGCGAATGCTATTGAGGCCATCAGAAGCGGCGAGCCGGTGACAAAGGCGgccaaacattttaaattaaattttgagacTCTGCGAACGCACGTCAATTGGTCAGCTGGTGAGCAAAGAGGAGGAGAGAGacagcataaaaatataaacgaaaCACAATTGAAGAAAGCGATTCTCGCCGTGGAAAAAGCAACCACTATCGCAAAAGCTGCCGAaatcttcaaattgaattacCAGAAGTTGAGAAATGACATTAACCGTTCAATGCCGACAAAATATCGAACTCAAGTTTTCAACGCAGATCGAGAAGCGGCGTTAATGATTTATTTGCTGAAATCATGTGCCATGTCAACAGGAGACGTGTGA
- Protein Sequence
- MVRNYKQKKQPTDKEALANAIEAIRSGEPVTKAAKHFKLNFETLRTHVNWSAGEQRGGERQHKNINETQLKKAILAVEKATTIAKAAEIFKLNYQKLRNDINRSMPTKYRTQVFNADREAALMIYLLKSCAMSTGDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -